Genomic Feature

tsu2cd

ID
ZDB-ALT-200206-3
Name
tsu2cd
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Meng Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 18
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 50815556 - 50815557 (GRCz11) (1) Details
Nucleotide change
AT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ACACACACACACACACACATAAATAAATGATCAAGTGTGTAGAGCTTATAGAGCTTCATCCTCCAGACCTGCTGTGAGCTGGTGGTGGTGGAGGATCTCAGCATAATTCTCCTCCACAAACATCTGAATCACACACAATCCCCATTTCAGAACACCACCCATCACGAGATTATCCAACACAAAGTCCAGAACCACTGACCCGGGCCTGTAAACACCCTACATCTGACAGTTCTGGAGCAGCCTGAGGAGCGCAGTGTAATGGACACCGGGCGGCACGCTCGACCTCCTTTACTCTGAGTTTACTCTGCATGTGTAATGATCTGAGAGACGTGAGGATGGAGATGTGGAGTCTGCAGTGTGTTTAACCCTGACCCAGCAGCTCTGAGGACCGGTTCTGCAGTCTGTAGGGGCAGACGGATCTCTGTTCTCCTCTAACTGTAGATGTTAGCTTCATCAGTGTTCTGCTTGTGTTTCTGCAGTTCTTCATCCTCCTGCTCCTG
AT/- CTTCCTGCTGGAGATCCTCTTCATCATCCTGTTCTTCTCCTATCAGGATCAGGTGTGTGTAAATCCACTCTCGCAGTGTTCTGGTGATTCAGCACAACACACACACGCTCACAGTAAACACACCGTCAGTGTTCTGCTCAGCTCTTCTCTCGTGTGTCAGAACTCTGTGGTCATCTACGCATGCGCAGCGTCAGAGCTGAAGCTGAGCCGTCCTCATCTACTGTGATGAACAGGGTTATTCTGAAGCTCCAGCAGGTCATGCCTCATGTGGAGCAGAGCTGAACGTGCTCCTACTGCAGAAGAAGACAACACTGAACAGCTGCAGAGATGAACACACTGACGGAGGACTGCAGCTGTCCAGCAGAGCGGCGGCGTGTTGATCAGGCTCTGGCTTGGATCATCTCGGAGACGATATGAAGATGCTCTGTTGGTTCTGGAGGCGTATCTACATCATCAGCAGATCAGCTCGTCTGCCGTTCTGCTGCTGCGCATATAAAGTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
tspan4atsu2cd/tsu2cdHomozygous♀-/- ♂-/-5 figures from Jiang et al., 20192 figures from Jiang et al., 2019
tspan4atsu2cd/tsu2cd; s870TgComplexFig. S6 from Jiang et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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