Genomic Feature

ii003

ID
ZDB-ALT-191219-2
Name
ii003
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Saunier's lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 1535417 - 1535420 (GRCz11) (1) Details
Nucleotide change
AGGA/-
Variant Notes
p.Gly89fs91*
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CCCTCAGCATTAAAGAGGAGCTGACGTTGGAGAAGCTCCAGGGAGTGAAGTTGTGGATCACCGCAGGTCCTCGAGAGAAGTTCACTGCTGCTGAGGTGAAGCTAGTTCATAGATAGTTTACAAAAAATTAACCATTTACCCACTATGTACTCTCCCTAAAGTATTTCCAAAAGCCTTTAACTCTGTTGAACACAAAAGAAGATATTTTGAAGAATGCTGAAAACCTGACAGCCATAGTAGAGAAAACTAATACTATGGAAGTCAATGGTTACAGGTTTCCAGCTTTCATCAAAATGCCACCTTCTGTATGTAACAGAAGAAAGAAACTCAAGCAGGTTTGTGACAGGTAAAGGGGCGGGTAAATGGTGTCATATTTGCGTGAACTGCCCCTTTTAGATCCTCAGATGAAGTGATGTGTTTTTGTATTGTTGTGTGCTGCAGTTGGAGGTTCTTAAGCAGTATCTGGACAGTGGTGGAGCTCTTCTGGTGATGCTCGGAGA
AGGA/- GGAGAACTGAAATATGACACTAACATCAACTTCCTCCTGGAAGAATTTGGTATTATGGTTAACAATGGTGAGTTTATATTTGGAAGGGCGTCCGCTGTGTAAATCATATGCCGGAATAGCTGGCGGTTCATTCCATTGTGGCGACCCCTGATAAATAAACAAAGCAGAAGGAAAATGAACGAACGGATGTCTCACAAAAATAAAGAAAACACACAAAATCTGAAAAGTTATATTGAAGGTGTTTCTGAAATGAATATTGTCTTTCCAGATGCAGTGATACGGAATGTCTATTACAAATATTTCCATCCTAAAGAAGCGCTTGTGTCCAACGGTGTTCTCAACAGGTTTGTGTGTTCAGTTGTGTTTCCCTGTGGAGGTTATGCTGAAACAGTCAGGATTTTCTAAATGTTGTTTTTCAGGGAGATCAGCCGTGCTGCTGGTAAAGTGGTCACAGGAGTGATTGATGAAGAAAACACAGGCAATAATTCACAGTAAGTCGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ift52ii003/ii003Homozygous♀+/- ♂+/-Fig. 2 from Dupont et al., 2019
ift52ii003/ii003; hu5910TgComplexFig. S1 from Dupont et al., 2019
ift52ii003/ii003; li1TgComplexFig. 2 from Dupont et al., 2019
ift52ii003/ii003; zf106TgComplexFig. 2 from Dupont et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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