Genomic Feature
zf3016
- ID
- ZDB-ALT-191023-7
- Name
- zf3016
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Xu Wang Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 12: 48398719 - 48398728 (GRCz11) (1) Details
- Nucleotide change
- GGCATCACTG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 10 bp deleted in Exon 3 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TTCCACTGTGGCGACCCCTGATGAATAAGGGACTAAGCTGAAGGAAAATGAATGAAATGCTGCAATATGGTGATGTATATCATGATCATCATATGAGATGACGACATATTTACAGCATGATTGTTGTTTCTTTGATGCTATGAAATGTATTTATCACTTTTTATTTGAATGCACTTGAATATACCTTTATTGTGGACTGACTTTCTGGCTCTATTAATTAATTGCACTGTGCTTTTGTGAGCCATGATTTTTTTTTTTTTCAAAAGACAGGCTTGTGAGCTCATCTTCACCACAATATACTACAATATTTCATGACAAATGTGTTGTGGAAGGTGTGTGCACAGCTGAATGCACTAATGTGTTTAAGTGATTGTGATTTAAAGTGTGATTGAAATGGTTTTGTTTTGTGACTCAAAGTAAATCTATTATTTTATAACATAACATAATGAATGTCTTTATTTTTGTGTGCAGCTTTTGCGTGTTTCGTGTATGGTGGTCTG
GGCATCACTG/- CAGGCGTTCACAGATTGTGGAGTCACAGATCATATAAAGCCACTTTACCTCTGCGCATCTTTCTGGCCATCGGAAACTCCATGGCCTTCCAGGTAATCAACAATAATCCGAGAAATACTGTCGAGAAGCATCTCAGGTTGATTACAGCACAATCCACTCGCTATCTGCAACACACAGTTTGATTTGTGTCGGACATATGCTGATACTCAATAATAACGCAGTTTACCAAGATAATGAACATGTGTCATATAGTGCTGCTCAAAAAATGAATCCTGATTAAATGCATCCAAAATAAAAGTTTATTATGTACAAAAAAATAAAAACAGAACCACAAAAGACATTTAAATGCATATTTAATTTATATTATGTATAGATTATATCTAAATATAAATTTCTCTAATATATGCATGCATGCGAGTATTTATAAATGCATAATATACAAAACACACATGCATTATGTCAATACAAACTTTTATTTTGAATACTGTTAATCGTCTGTG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| scdzf3016/zf3016 (AB) | Homozygous | ♀+/- ♂+/- | 2 figures  from Zhang et al., 2022 | Fig. 6 from Zhang et al., 2022 | |
| scdzf3016/+; gz26Tg; gz32Tg; zf3013Tg | Complex | Fig. 5 from Yao et al., 2018 | |||
| scdzf3016/+; gz32Tg; zf3013Tg; zf3014Tg | Complex | Fig. 5 from Yao et al., 2018 |
1 - 3 of 3
Show
Supplemental Information
- Genotyping protocol
- None
- Wu, C., Hu, B., Wang, L., Wu, X., Gu, H., Dong, H., Yan, J., Qi, Z., Zhang, Q., Chen, H., Yu, B., Hu, S., Qian, Y., Dong, S., Li, Q., Wang, X., Long, J. (2022) Assessment of stromal SCD-induced drug resistance of PDAC using 3D-printed zPDX model chips. iScience. 26:105723105723
- Zhang, Q., Sun, S., Zhang, Y., Wang, X., Li, Q. (2022) Identification of Scd5 as a functional regulator of visceral fat deposition and distribution. iScience. 25:103916
- Yao, Y., Sun, S., Wang, J., Fei, F., Dong, Z., Ke, A.W., He, R., Wang, L., Zhang, L., Ji, M.B., Li, Q., Yu, M., Shi, G.M., Fan, J., Gong, Z., Wang, X. (2018) Canonical Wnt signaling remodels lipid metabolism in zebrafish hepatocytes following Ras oncogenic insult. Cancer research. 78(19):5548-5560
1 - 3 of 3
Show