Genomic Feature
skt3
- ID
- ZDB-ALT-191002-4
- Name
- skt3
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Torres-Vázquez Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 2: 9561008 - 9561063 (GRCz11) (1) Details
- Nucleotide change
- CATGCAGTTGTCGGGAAGTCCGCGGTGAACGGCGGAGGACTCCCTCCTCCACCTGC/GGACTCCTCC
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 10 bp inserted / 56 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
AAAAATAATGAACTAGGCTATTACAAATCTATAATGCGCGTTGGTTATTTCACAAAACAGTCAGCGTGTATTAAGAGTACGTCTGCATTTACCAGTTAAGAGTTTTAAAAATATCATTAACTGACACCTGAGCCAGGTAAATGAGTTTCTAGCTGACGTCACGACGTCCTGTATCGCGCGTGCGTTCAGCAGTGGAGTTGTCCATTGTGTCTCAGCAGCTTGAGAGTTTACAGTAGATCCGCATACAGTCAATTTATACTCGACCACCTGTTGATTACTACCGTTTTTAGCTCTTCGGTCGCTTTCTAAAGGGAACCTGACTAAAAGGACACGTTAAACAGGTTGATTTCCGTCCTTCGATGCTCTGGCTGTCTGTTTGCCGTGTAATTTAAGCCCCCTTCGGATTTACAGGAGGAGCGAACATGCCTTTGGGACTCAGGAAAAAGAAAAACAAGTCGAGAGAAAGCTCGAACTTAGTGGAAAACGAGGAGATCGGCGGA
CATGCAGTTGTCGGGAAGTCCGCGGTGAACGGCGGAGGACTCCCTCCTCCACCTGC/GGACTCCTCC CAGCCTGCGGCCGAAACTGGTGTTCCATACGCAGCTCGCGCACGGGAGTCCCACAGGGAGGATCGAGGGCTTCACGAACGTCAAAGAGCTGTACAACAAAATAGCAGAAGCCTTTAATTTAAGTCCAGATGAGGTAAATGCCAAATAAATTAAGTGTTTATCTCAGTGTGAGTCGCTAATAAACTGATGAAGCGAGTTTCCAGATCTAACAAATCTCATAAAATCCACTGCTTTGTGTTTGCATAAGGTGCGTCTTTCTAGATACAGGCAGGTGAAATCTCGTTGACATTGTTATTCCACTTAAATCCAGCTTTGACTTTTAAAATGAGTTCTGGTCTGCACTATAAAGTTATTTTTTTCCAATAAGTGGCCATAAAACAGAAAATAAATGTTATATGGACCAGTAACAAAACATGATAGGTTATCTGTTAAGATACAGATATCCAGTTTAAAACACACGCTGAGTACTTAGAAATGTATTTTGTGTTTCAATCTTGTAT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| gipc2skt3/+; gipc2skt4/+; y1Tg | Complex | Figure 4—figure supplement 2.  from Carretero-Ortega et al., 2019 | |||
| gipc1skt1/skt1; gipc2skt3/+; gipc2skt4/+; y1Tg | Complex | Fig. 4 from Carretero-Ortega et al., 2019 | |||
| gipc1skt1/skt1; gipc2skt3/+; gipc2skt4/+; y1Tg | Complex | Fig. 4 from Carretero-Ortega et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None