Genomic Feature

zf2122

ID
ZDB-ALT-190819-4
Name
zf2122
Synonyms
  • iq361 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 23
Variants
Variant Type
Small Deletion
Variant Location
Chr 23: 33358154 - 33358214 (GRCz11) (1) Details
Nucleotide change
AAACTCCTGGCGGTAGCGGTAGGAGTACAGGCCCAGCAGAAAAGCCCATTTCAGAGTCATG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
61 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TATCCACCCATCAAAAGCGACATTTACAGAGAACTGGTCCAACGAGACGCTGTTTCCAAAAAATACAGTTTTTGCACATTTTTCTTTTGTTGACAGTGAAGGAGAGCCTTCATTTCACATCTGACATTTTGGAAAGAAGTTGCCCTGAGTAAAGTAACAACATCCTGTGACCATATATTAGTGTATCCACTTACAATCAAACACTAACATACCTTCATCCAGCATCAGTAGAAAACCCCTTATCAACTCAAATTGACAAGAAAAGAGGCTGATGTTCACTGACTTCCTACTACAGGGCCTGAATCTGAGGGAAGGAGGGGATGAGATTTGAGTCTTTTCTGTGAAAGAAAGAGGCCGTTAAGACGGTATTTAAAAAAGGAAAACCATCCATCCATCCTTCCATCTTCTTCATGTTGGCAGGTGAAGCCACCGACTGGCAACTACAAATCCATTAGAGCTGAAGGAGCCAATCAAAAGTCACTGAGGATGCTGATGTCAGC
AAACTCCTGGCGGTAGCGGTAGGAGTACAGGCCCAGCAGAAAAGCCCATTTCAGAGTCATG/- AAACTCCACACGGCTGACAGGTAGAAGCTCTTAGGGTCAGATAATGCTGGAAAACATACAGAACGTGTTACGCATTGCACATGATAACACACTTTAAAGGGATAATTCACCCAAAAAAAATTAATTTTACTCTATTTATTCACCCTCAAGGGGTTCCAAACCTTTATGGGTTTCTGTTGAACACAAAAGAAGATATTTTGATGTATGATGGAAACCTGTAACCATTGATTTTACATAAACAAATACTATGGAAGTCAATGATCATATTTCTAGCCCTCAAAATGATCTTCTTTGTGTTCAACAGATAAGGTCAAGTAAAGGGTAAGTAAATGATGATAGAATGTTCAGTTTTAAGTGAGCTATCCCTTTAAAAATGCCATTATAATTCACAGAAGTATATTTCCGTCAATGTCAAAGTACTCACACTGCTTTTCTATAACCGATAAAGTTATGAAAGTGGCGAAAGCAGCGACAGCTAAGAGGGAGAAGACCGAGCTGAC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
slc48a1azf2122/zf2122Homozygous♀+/- ♂+/-Fig. 2 with image from Zhang et al., 2018
slc48a1azf2122/zf2122; cz3325TgComplexFig. 2 with image from Zhang et al., 2018
slc48a1azf2122/zf2122; slc48a1bzf2121/zf2121Complex2 figures with image from Zhang et al., 2018
slc48a1azf2122/zf2122; slc48a1bzf2121/zf2121; cz3325TgComplexFig. 2 with image from Zhang et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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