Genomic Feature

mdu5

ID

ZDB-ALT-190621-1

Name

mdu5

Synonyms

del 13 bp (1)

Affected Genomic Region

csf3r (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

TALEN1-csf3r

Lab of Origin

Ward Lab

Current Source

Other Pages

Alliance

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 16: 3108768 - 3108780 (GRCz11) (1) Details
Nucleotide change: AAAATGATCCGTT/-
Variant Notes: None

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 14 bp deleted (1)
Transcript Consequence: Frameshift , Premature Stop (1)
Protein Consequence: Polypeptide Truncation (1)

Sequences

Flanking Sequence: CGTCACCCCTTTTGTGGAAACTGTTCTTATTTAGTTTAAATATTGAACAGAAGGTTGTTTAAAATTCAACATTCATTAATTTGTCTTCGACTTATTCCCTTATTTATATGGGGTCACCACAGTGGAATGAACCGCCAACTATTCCAGCATATGTTTTACAAAGTGGATGCCATTCCAGCCGCAACCCAGTACTAGGAAACACCGATACACACTCATACACAACACACTCATACACTACGGCCAATTTAGTTTATGCAATTTACTATAGCGCATGTGTTTGGACTGTGGGGAAAACTGGAGCACCCGGAGGAAACCCACGCCAACATGAGGAGAACATGCAAACTCTACACATAGAGAAGCTAACTGACCCAGCTGGGACTCAAACCAGTGACCTTCTTGCTGCGAGGCGACAGTGCCGCCGCTCATCTTTAATGTCCCTTGATTATATTAAAAAGTAGAATAATCATAATATTCACCCAAACGTTCAGTTGTCAGGGTCG
AAAATGATCCGTT/- AACACATCCGCCCTTGGTACAAATGGATAAAAGGGCATGATATTTAGTGTGTGGTTGAAGATCCTTCACCTCAACGCTGGTCTCCGTAGTCATTATCTCTGAAAACGGTTCACAAACATCATAGTTAATAAAAACATCGTCCAGCCAATCATCATACTTCAACTTTAAATCCTCAAATACCTTTGATTTCGTTCTTATTGTGCCAGAAGTAAAACCTATATCCTTGGATGATCCCATTTCTCTTTTCGAGGGGGATTTGGCCCCAGTGAAATTTGAGGTGTGAACGACTGATCTCCTCATAATTCAGCTCTGGAGCATCAGAGGGTGCTGGGATAAAAAAAAATAATCAAGATTTTGTTAACATTATACAAGTGAAGACAGAATTATTAGCACTCCTGAATTATAAGCCCCCCTGTATATTATTTTCTCCGATTTCTGTTTAACAGAAAGCAGATTTTTTTCAACACATTTCTGAACATAATAGTTTTAATAACTCTAAT
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations