Genomic Feature

zf2078

ID
ZDB-ALT-190322-8
Name
zf2078
Synonyms
  • whsc1 M2 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 13
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 13004557 - 13004594 (GRCz11) (1) Details
Nucleotide change
TTTTTACCATTCTTAAAGACCTTCCCAATGCCAGTCTG/-
Variant Notes
Deletion of 38 bp within the border of exon 15 and intron 15.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
38 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AACTTGCTGTCTTCAGAAAAGTTGAGGTGAAAATCTAAAATGATTGTTTTTACTTAAATTTTTGAAAGATACCATTTATTAGATAAAAAAAAAGTTAGACTTAAAATCCTATTTAAAATTTAAAAAATTAAAAACGTATCAAAATATCAGAAATCTGTATTGAAATGAGTCAATTTGACTGTAAAAAAAAATAAATAAAAAATCAGCAGTCAGAATTGGCTCTAAAAATAAATAAATAAATAAATGGTGCATTACTACAAACTTCCAACCATGAGATTCTTATATGAGGATTGCAGTACCTTGATGTATTTGAATGGAGGAGGCTTCTTGTTATTTTCGTGAGCCTCTTTTGCCTCTCTCTCCATCTCGATCTCCTTAAAGCGAGTTTCAGCATCCAGCAGGGCTGCACAGTAGAAATAAATAAATAAATAAATCCCACAATCCCACAACTGCTCTAATAATGCTGATATACAAATAAGATAATAAAACAAGAATGACTA
TTTTTACCATTCTTAAAGACCTTCCCAATGCCAGTCTG/- CTGGTACTTGCTTCCCCTGTCTCCCTCCATGTAAGGAAAAACTCGACCCTGATGCGTCCAGAAATAGTCTTTAGAGCCAAAGAAGAAGACGGGGAACTCTCCAATCTCATGACGCAGGTGCTGGATGTTGGTTGGGATGTTCTTGGGATGACGGATCTCTGCAGGCCACCATCTACAGTTTCAAATCAAGTCAAAAAGGTAAACACAGGAAAATTTGCTTTTGCAGTAATTTAGTTTTCTATAAAAAAGTTTTAGGAAAATGATATACTCTTCCTACAGGAGTACTTTTATTTTGACAGCACTTGTGAGTCAGGCTACAGATAAAGTTTAGAATATGATCAGAGCAGGTGACTACAACACTCACAAGCGTTGCTTTCAATCAGAATTACACTTCCAATTTTACTATAAAAGCAGCTTTCAGTGTTTGTGATTTTTTTTATTTTTTATGTCTAAACGTGAAAGACTGAAATTTGGATATGAAATGGAGATGAAATTATAGG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nsd2zf2078/zf2078Homozygous♀+/- ♂+/-5 figures with image from Yu et al., 20172 figures with image from Yu et al., 2017
nsd2zf2078/zf2078; zf2076TgComplexFig. 2 with image from Yu et al., 2017
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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