Genomic Feature
nds201
- ID
- ZDB-ALT-190314-5
- Name
- nds201
- Synonyms
-
- c.100_106het_delAATGATG, p.N34Rfx*9 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Hejtmancik Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 22: 24604419 - 24604425 (GRCz11) (1) Details
- Nucleotide change
- AATGATG/-
- Variant Notes
-
c.100_106het_delAATGATG, p.N34Rfx*9
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TTAAACAAAAGGAAGAAGACTTCACATCTGACTGCACATAGATATGAGCACTTAGAGGCCGCATTTGAGGGTTTGAATAAAGCTGAATGTTAATCTAGCTGTGTGTATCTATGTGCCAATGAATGACGGCTCTTTCGCTTCCAACATCTAAGGAAATGTTTGGCTAGTGCAGTCGACTTTTCAGCAAAATATTATGTTTATTTATTTTTGTGTTCGGCCAAGAGTGTAACTTTGGTAGTCGATTTTTGCATATATAATACAATTTCGGTTAATGTAGACTAACCGAGTCGCATACGGTGAAAACACAAGCTGAAATTGAACTTAAGATACCTTTTCATAACAGTCGAAAGTGAAACAGCCAGGCAATAGTTTTATTAACTTACTCGGTTCCAGTCGGGATTATGAAGCTGTCAAGCTCTTCATCGTTTGGACTTTGTATTTTAGTCGTTTTTTTCTGTTTTGTTGTTATCGAAAGTGCAAAAATCCGCATTGACGGTTAT
AATGATG/- AGGCTTGGATTGATCCATATGACATGCTGAACTACGACCCGACGACAAAGCGAATGAGAAAATCCACAGAGGTAAAAGCGATTTTAATTACTGTCACTCGTGTATTTCAGTATTTGCAATTTAAAACCTTTTCTGTTGGCATTTGTTTGTGAAATTAGACTCTACTTTGCCTTGTTTACTCTTTTGGATAGATTCCATATGTGGAAAGTCCGCCCAACAATATTGAAAATTCAATTATTATTTAGTCATTCTGGTGTTGTTAAAATGCTTTTTGTATGCTATTCATGTTCAAAACTGTTAAAGGAAAATAACTACAAAGAGGTTCTTGCATTGCTCCATATAATGACATGATTGCTAGTTGCGTTGCGACCAGCCTCTTAAAGAGGCAGTTCACCCCAATGCGAAAAAAAAGAAATTCTCACTCTCAAGTGGTTCCGATACCTTGTTTCTTTTTCGTGAAAGAAAGATATTTTGAAGAAAGTTAAAAATATTTAACCATT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| clcc1nds201/nds201 | Homozygous | ♀+/- ♂+/- | 2 figures  from Li et al., 2018 |
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Supplemental Information
- Genotyping protocol
- None