Genomic Feature
b1240
- ID
- ZDB-ALT-190314-4
- Name
- b1240
- Synonyms
-
- 13 bp deletion in exon 1 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Westerfield Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 3: 56896644 - 56896656 (GRCz11) (1) Details
- Nucleotide change
- TTCTTTAAGCAGG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 13 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AGACTTTCTCCAGAAGAAATAATATTGTCTGACATACTGTGAAAATTTCCCTGCTCTGTTAAACATCATTTGGGAGTATTAAAAAAAAGGGGGAAAAAATTCTTACAGTTAAACTTACCATGTATGGCATTATGTTAATAGGGCCACACTTTGAGCAACACCACCATAAACATCGTGAGAACTGGAATAAGGAAGTAAACTGGAGAACAGCAAGTGCCTCACACACTATTAATCAAATCCTCATCCTTCATGACACCACTATTATGAAGTGACGACCAGGGCTCGTTCCTGCGTAATGCTGTCTTGCATGAAGCGTAAACATGCCGGCTAAACACCTGAAAGATCAACAGTTTGTGGTTTTAATGAAAAGAGCGATAGGAGGCTGGGTCTTACCCTCTCCCTGCGATCAGCCGCAGCGCGTCCAGGTTGCCGTGGTACGCGGCCCATAGGGTCGGTGTCATGCCATCTTCATCCGGCGCATTCAGGTCCTTCCGCGTCGC
TTCTTTAAGCAGG/- TCGAGGTAGCCATCCCGAGCTGCCTTGTGGTATTTGTCATTCATGGTGATCTCGAACCTCAGCCTCCATCACTCTCTCGCGGGCGCTGAGCATCAGGTTTGGAGCCCCGAGCGGTGCGCGCGCGTCAGGCGCCTGGAGTTTCCAAGGAGACTCGGACGCGCCGCTACCGCGAAGGCGTGGCTTCAGCTCTGAGCAAACAAACACAATCTGTTCCCCTGAAGAGACTCAAAATAATGGCGTTTGAGGGAAGAAAAACTTTTAAAAGTACTTAAAGAGTCCATATAAACATAAAGATTCAAATGCAATTCATTAACAAAGCATTGTAAATTCTATAATATATGTAGTACCGCGTGATATATTTTACTATAGTTCAAAACACTATAATATTTAATTCAAGAGTCTAGTAAAATACTAAAATGCTGTAGACTTTTGTAGTAAATACTATAGTTTTTTGAACTATAGTAAAGTGTATTATGTTGTACTCTGTATATATTATAGTA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| ush1gab1240/b1240 | Homozygous | Unknown | Fig. 3  from Blanco-Sánchez et al., 2018 |
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Supplemental Information
- Genotyping protocol
- None