Genomic Feature

ecu4

ID
ZDB-ALT-190207-1
Name
ecu4
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Yong Zhu Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 21
Variants
Variant Type
Delins
Variant Location
Chr 21: 37437037 - 37437045 (GRCz11) (1) Details
Nucleotide change
GGCCATAGT/AGACAAA
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp inserted / 9 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTACTTTTAAACTTAAAGTTTAACACAGTTAAACAATAAATTGCATAAATTGGTTGTCATGATATAAAGATAAAAGGGGGTGTCTGAAAGGAACTTAATGCGGTTTACAGTCATTGGGTTTTATTAGACGTTTTTAAATAAATACTCAAATGCAAATGTAAATATATATAACAGCTAACTTCAACCCCATCGCAAAAACTACACACCCCAGAACATCCACCTCGACTCTGATTGGCTGGCGCCTCACCATTGTGTGTTTTTGGCTTCTGTGATTGGTGCACAGCTGCAGTCGACGTCGAGCCTCGATGTTCTCACGCACAGTATCAGAATCGAAATGGCTGAAGAAGCAGTCGAGCAAACTTCTGGAATCCTTCAGGAAATTTTCACGTCGCCACTGAACATCAGTTTGCTATGTCTTTGTTTGTTCCTACTTTACAAAATCATCCGCGGAGACAAGCCTGCAG
GGCCATAGT/AGACAAA CGGTTGAGGAGCCGCTGCCTAAACTCAAGAAAAGAGATTTCACTTTAGCAGATCTGCAAGAGTACGATGGACTGAAAAACCCAAGAATCCTGATGGCTGTCAACGGGAAAGTATTTGATGTTACAAGAGGGAAGAAATTCTACGGTCCAGGTATCAACTTAAATATCTCAATCGAGAGTGTGATCTCAAACTTATCTCAGCTGCTTGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTACGAGGAACTTTTTTTTAAATTACGCGTGAATAATCTATTGTGTTTTATTAAAATAGCATTGATTTAATTACTGACACGCCCTTTTGTGTTGCATGTTTTATGCCTAGTCATAACTGCTAAACACTTCAAAACTATCATGTTAACTAGTAACACGCAACCTACAGAAGTGTGTTTGTGTTTGCATTGTTGTTACACTAACACCAAAACGCTGTTCTGGTATTTTCTTTCTTTTAGTAGCTTTTGTGCACACTTTTGCAATGCC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
pgrmc1ecu4/ecu4Homozygous♀+/- ♂+/-3 figures with image from Wu et al., 20184 figures from 2 publications
pgrmc1ecu4/ecu4; pgrmc2ecu10/ecu10Complex2 figures from Wu et al., 20192 figures from Wu et al., 2019
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations