Genomic Feature

ua5004

ID
ZDB-ALT-181113-2
Name
ua5004
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Allison Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 10
Variants
Variant Type
Delins
Variant Location
Chr 10: 20630471 - 20630490 (GRCz11) (1) Details
Nucleotide change
AACTTCTAGCCATCGTTTTG/T
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted / 20 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTGTTGATTTTGTTTTTCTTGGAATGTTTTATTGAAGGATAGTGAAAATGCATTGATAATATCTTAAGGATCATGCTTTAGGCTTTTAATGTGAAGATGATTTTATGGGTATTAATCTCATACACTATAATGGACACCAAATTGATAAGCTGAAAGTGCTGTAGAGCCATATTACTCTATAGAAATGCTTTCATGTCCATTACTGTCTTGTCTCCTCTCTGTGCCGTTTCTGAATACTAAAAGCATTCTCCATTAGACCTGTGATAAACACTAACTCTGCTGGCCTTTCCAAACAAAATGCTGTTTACTAAAGCCTTGTTTAGGAATGTTTTTACTGTGTTCTCTCCTGTATTAAGTATCAGTTTGACTCTTGTTTTGTATGAAGTAAAATCAGTGAATTTCATTAAGCTTACTTTCTGTGTCTTTACCTCCTTGATCATTGTCAGGTCTGCACTAATTCACTGTGTTTTTTGTTAGGACCAAAATGGGGGAGTTATGCA
AACTTCTAGCCATCGTTTTG/T GTTTTGATGGCAGTGTTACATTATACATCAGGAGGAAAGAAAGGCACTGTAAGCAAGACTGTTCCCAAGAAGCCACCCGAAAAAACATCACAAGGGACCAAGACCCAACCTAACTATCCCAGACAACCCTCCAATCCTGGTGCAGGAAGTAACCCAGGCTACCCTAACCAGCAGTATCCTGGGAGAGGTGGATCTAGTCCATCAGGGTATCCCAACCAGAATCCTGGGGCAGGCAGCTATCCAGCTGGAGGCAGCTATCCGTATCCTGGAAGAGGTGGCTCCAGCCCTGGAGGGTATCCCAACCAAAATCCTGGAGCAGGTTCTTATCCATCTGGAGGCAGCTATCCCTCAGCTGGTGGAAATCCCAATCAGTATCCTGGGAGAGGTGGCTACAACCCTGGAGGGTATCCCAACCAGAATCCTGGAGCAGGTTCTTATCCAGCAGGAGGCAGCTATCCTTCTGCTGGTGGAAATCCCAATCAGTATCCTGGAAGAGGTGG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
prnpbua5004/ua5004 (AB)Homozygous♀+/- ♂+/-2 figures from Leighton et al., 2018
prnpbua5004/ua5004 (AB)Homozygous♀-/-Fig. 2 from Leighton et al., 2018
prnpbua5004/ua5004; prnprs3ua5001/ua5001 (AB)ComplexFig. 4 from Leighton et al., 2018
prnpbua5004/ua5004; prnprs3ua5001/ua5001 (AB)ComplexFig. S2 from Leighton et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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