Genomic Feature

cig1

ID
ZDB-ALT-180522-2
Name
cig1
Synonyms
  • Ma1 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Pei Lab, Research Center for Environment and Health (RCEH)
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 22
Variants
Variant Type
Small Deletion
Variant Location
Chr 22: 12792510 - 12792513 (GRCz11) (1) Details
Nucleotide change
CCAG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ACCCTTCAAAAAGGTCCCAACCCAGTGACAGCTTGTCCAACTTTTTTTTTGATAGTTTAGAGCAAGGGTGTGCAGGTTCAGTCCTAGATTGGATTGAGTCTTGATAACACACCTGCCTGTGGTTTTCTACTATGAATTGAGAGAACTAAAAACTGTAAAACTCTAAACTGAACTGGCCTAACCTTGCCTTAAAAAGACAAATGTGACTTTATCGGTCTCTAAAATCTACATATTATAACCTTAAGGTCTTACAAATCTTTTAATCCATATCCCTGTACTGGGGGACATGGATTGTACATTAACAAGTTTTCTGTACACCTGAATGTACAGTTGTCTTTTCTCTCATAACAAAATGGAAAAGGTGTACATTGTCTGATTAATGCCTTGCAGCTCAAGCCATCACCCAGCTTGTGGGAATGCCGAAGTGTTGCATGTTCGCACTGAGCCCAAAGATTCTGCCCGACAGCATCCTGAAGGCCCTGCTCTGGATCTACCTCCGA
CCAG/- CTGAGGAGCCAACCACAGTCTACATCCAGATATCTCACCTGGAGTCTTCTTCTGAAGGGAACAATCACTCGAGAATACGTGCGCAAAAAATTGACGTGAATGCCCGGACAAATTCCTGGCAGCACATCGACATGAAGCAGCTGTTGAAACTCTGGCTCAAACAGCCCCAGAGTAACTTCGGGATAGAAATCAAGGCCTTTGATGCAAATGGGAATGACCTGGCTGTGACCTCCACAGAATCTGGAGAAGAAGGACTGGTAAGTTAGTGCATGACTTGATATTTAAAGGGCCATGAAACCCCCTTGTTTCAGCACTACTTTGGAAAAAGTCAGAAAAGTGGGCGTGTCCAGCTCTGTTTAGGGGGAGTGTCGGAGGAAGAAAAGTGGGATGGTGTGGGAGTGTCTATTTGGGCACGCGCGAGTTTCAGAGTCAAAATACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
mstnacig1/cig1Homozygous♀+/- ♂+/-2 figures from Wang et al., 2017Fig. 4 from Wang et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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