Genomic Feature

twu0101

ID
ZDB-ALT-180424-1
Name
twu0101
Synonyms
  • stmn4?4 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Shyh-Jye Lee Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 20
Variants
Variant Type
Small Deletion
Variant Location
Chr 20: 34797844 - 34797847 (GRCz11) (1) Details
Nucleotide change
CACT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CTCTCTTCTCAGCAAGATGCTTCAACATCTCGGCCTCCTGGAACTAGAGAAAACAGTACAATTTCAGCAACAGAATCAGACCACAGACAGAAACAGATAGATTGTGTTTAATATCCAACCTTCCGCCTCTCCTCGGCTGCTTCCAGTTTCTTTTGGATCTCCTCCAGCGACGGGTCTTTACGCTGGGGCATGGATGTGTTAAGCTCGGGTGCAACATCAAAGGAAGGGGGTTTCAGGATCACCTCAAAAGCCTGACCCGAGGTCCGCTTGTTCAGCTCAATGACCTCCATCTCTTTGATCACACACCAGTTGAGATCCACCGCATCTTCAAGTAGGATCAATTACAGTCAATATCCTCATTATATTTATGCTCATTACACTGTAGTGTTTGAGAGACATTTATGAAATATGAACACAGACTGAGAAATGTGTTATTTACCCTCGGCCTTGTATGTGGGGTTTTCTGCACGGTTTGAGTTGATGCAGGAGCACAGAAGTGA
CACT/- AGAGGGAGCTCCTTCACCTTGTCTCGATATGCTGTGCAGAGAAACGTCAGGTGTAGAGAATATCGGACATAAATATAAACATTTTTTATTACACATAAGGCTAAAAATATATCATTTAAATTATTTCATAGAGTTTATCCTACAAAAATATTTATACAAAAAATTTAAATTGATATTGAGTTAGAATGCTGTTTTTGTGACAGCTTTAATGGAACTATTTCACATTTATTTTAGTCTTGCCAATTTACTCGACTTTTTTGGATTAATGTTGAAGATTTTATGGCTCATAATATTTTGAAATCATTTTACTTATCTTATAAACATGTGATTTAGGATTATTATGTTAAGGATCGCTCTTTAAAAGATGCTGGTTTTATTATAAACTTTATTTTATTATTATGTGAACTTCACATACATAAATCCAAGTTTGCCAAAAGCAAACCTTTCTACATGGTGCTAGAAAAAGAGATTCAAATGGATATAAAATTTATGTCTAAGTC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
stmn4twu0101/twu0101; rw0130aTgComplexFig. 3 with image from Lin et al., 2016
stmn4twu0101/twu0101; rw0130aTg + MO2-stmn4ComplexFig. 3 with image from Lin et al., 2016
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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