Genomic Feature
sh346
- ID
- ZDB-ALT-180404-3
- Name
- sh346
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Malicki Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 3: 49546363 (GRCz11) (1) Details
- Nucleotide change
- A/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TCCACACAGTTTGATAGAGTGCTTGGACCCAGAAGCTTAATGTCAGACTTAACAAGGGCATAGTAACAGAAACCAAATAGCCAATACTGTAGATTTCACTGCAATACACCAGTTTATTGTAGTTAAACTAAAGTGTACAACAGTATTTATTAGAGTTTATTAATTCACTAGTTTGAATACTACAGTATGCAGTAGAATTTATTATCAGAGTGTTCTAGATACTATAATACACACAGTGTAATCATCCACACTGTTGTATTTATTTCTGAATTTTTAAATTAAATTTCCACCTTAAAGTCTTGGGATTCTTTGGCATGTCATAGTCTGAAAACATCAGATTTTTCCATCCTGTAATTGCCTCATTTTGAATGATAAACATTCTCACATTTCTTTCTTTGTCCAGGGACCTAATATTGTGGCCATCGTTGTACCAACTGTGGTGCTGGGCCTGCTGGCTATTTTGACGGCGGTTCTGGTGTTTCTGTTCTGCGTGGTGAAAA
A/- GAAGAGACAGACAGAGGGCACGTATCGACCCAGCGCAGAGGAGCAGACGGGAGCCAGAAGTGTAGAAGCGCCAGACGCCCTCAAACTACCCAAAGAGGAAAGACTGATTTGACGCAGTGGTTTATGTCTAACCCGCAGCACGTGATAATGGTGACTCAATCCCTAAACGGATAAACATTAACCAAAACACACTGAAGGCACAATGTCCAAACTTAGCCATGTGTTGTGGCTAAACAAAGTGAGTTTGACTACTATATGAAACTTGAAGGAATTCATATCTTCTACTCTCAACATATTTTAACACGCCTTTGACAATCATATTTTTAGATTGGCTTTTCTCAGAATGCACATTTTATGCTGTGCTTACTGTTGCTTTACACACTTAAACGCTGATGTTTGTGTGTGGTGATATTTTTTAAAGGTGGAGTGTGCCGTTTCTGCCCCTAGTGGCACAAAAAGGAATTGAAATCTGTTTGTTTTTGCATCTAGGAGTTTAACAG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| crb3ash346/sh346 | Homozygous | ♀-/- ♂-/- | 2 figures from Hazime et al., 2017 | ||
| crb2am98/m98; crb3ash346/sh346 | Complex | 2 figures from Hazime et al., 2017 |
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Supplemental Information
- Genotyping protocol
- None