Genomic Feature
b1279
- ID
- ZDB-ALT-180315-3
- Name
- b1279
- Synonyms
-
- 8-nucleotide deletion (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Postlethwait Zebrafish Genetics Laboratory
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 21: 198441 - 198450 (GRCz11) (1) Details
- Nucleotide change
- CTTTGGGGGA/TG
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2 bp inserted / 10 bp deleted in Exon 1 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TAGATATTGCTGGATGTCTCCATATAGATGACTGATCTGATCAGGTGTATCAGACCCTTCACAGCGAGACTGACAGCACATGTACATGAGTTTAGACGTGAGTGATCGGTGTTCAGAGTCTCAGGTGATGGCGGTGCCGTGTCCTCGATTAATGAATGGCTCCTTTTTCTGCGCCATTCCTGTGTGAACTCCTTCATTTCGTCACCTATCCTCCTTCGGTTTGGGCTTATCGTCTTTGCGACTGTGTAACCGCACGATAGAATTCATTGTGTTTTCCTCAATTCCACCTTTTTTCTCCTCCTCCTTTCCAACACCATCCGTTCGCTCTACATGAAAACAGTGTAAAGTATTCCAAGGCCAAGCCTGGCCAGCGTAGATAAATCGCAGCTTTCCCAGGCCGCCACAGACAACATCCACCGCTGCAGTCCGAGCTCCTCCAGCGAACGCTCCTGAATCCACAGACATGCTGCTGCGCCTCGTCCTGCTGCTGCTGGCCTTCC
CTTTGGGGGA/TG GATGTTTGTGCTCCATCCGTCACCTGAGGACCAGAGCCACAGGTAAGAGCATCCATCTACTGTACATCATTCTGCCTCAGGTGTTCATCGTGTGGGTGTTACACTATGAGGAAACAGCAGCAGAGAACAGGATAAGAGCTGTAGGAGTCGTATAATGGTGTGAAACGTGTGTGTTCAGTATATATTCAGTGTGTTGTGTCGATGTTCTGCCCTGAGCCGTGAGCCTACAGATGTTTATTCGTCCCGGTGTTGCGCAACAGCACAGAATGTGAAAACTCTGCTGGCACACGAGTGACCCTGAAGGAGAGAGTCATGAGATTAAACAGGTTAGCTGAAGAGCTGACCTTTCAAGCTGAGCTTGGGTCAAACACACACAACCCAATAGAGTGGATGAAGAAGAGTGTGTGTGTGTGTGTGTGTGTGTGTTTAAACCGTTTAGACTGCTGCTCATCAAGAGGGTTTGGAAGAGTTCCCATCAGACCGAGCGTTTCTCACAGCTT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| gsdfb1279/b1279 | Homozygous | ♀+/- ♂+/- | 4 figures  from Yan et al., 2017 | 2 figures from Yan et al., 2017 | |
| gsdfb1279/b1279 (AB) | Homozygous | ♀+/- ♂+/- | Fig. S1 from Yan et al., 2019 | ||
| amhb1375/b1375; gsdfb1279/b1279 (AB) | Complex | Fig. S1 from Yan et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None
- Yan, Y.L., Batzel, P., Titus, T., Sydes, J., Desvignes, T., Bremiller, R., Draper, B., Postlethwait, J.H. (2019) A Hormone That Lost Its Receptor: Anti-Müllerian Hormone (AMH) in Zebrafish Gonad Development and Sex Determination. Genetics. 213(2):529-553
- Yan, Y.L., Desvignes, T., BreMiller, R., Wilson, C., Dillon, D., High, S., Draper, B., Buck, C.L., Postlethwait, J. (2017) The gonadal soma controls ovarian follicle proliferation through Gsdf in zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 246(11):925-945
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