Genomic Feature

hg69

ID
ZDB-ALT-170809-6
Name
hg69
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Sood Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 12
Variants
Variant Type
Delins
Variant Location
Chr 12: 19966240 - 19966241 (GRCz11) (1) Details
Nucleotide change
AC/TACA
Variant Notes
Insertion 2 bp in exon 5, cDNA: 706delACinsTACA,
p. T236YfsX44.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp inserted / 2 bp deleted in Exon 5 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TGTTAGTAAATGCATTAACTAATGAACCTTATTATAAAGTGTTACTATTTTATTTTGTATTATAAATGGCATAGATTATGTATTTTAAAAAATGTAACATTGCATGACATTACAAAGACATTGCATGAAACATTGCATCATGAATTTTACCCGAAAGTTTTGTAAAAGTCATGGAATAGTACACATTTTTGTAGGAAAAATGTGTACAAACCCTGAGTGACAGTTAACGAAATTCGAATATATTGTTCTACATATTGTTATTTTTTGATTAAATGTTGCTGATCATATTTCACTATTTGTGCACCCCCTATTGTAAATCAAGTTGTAAATGTGTTTTTAAATGCTAGATTCCAAGCATCAGTGAACGCAACGCTGGATAAACACAAGCCAGATGTGGTGGAGCTGCACGTGACTCTGACTCCAGCAATGAGAGCCATTCAGAGCTCCATTCTGGACATCATGAATGCCTGCCTGAAAGAGCTGAAGCGCTACAACCCCAC
AC/TACA TGGAAGCAGAAGACCTTTCTTTGGAGAACAGCCTGGGCACTGCCTTTGAGAAAGTGAGAAATCCTTTTATTCACAATGCTATGGATAATACTGCATGTGGAATAATTCACAATATCACTAAACTATACATATAAATATGTATATATGTACAGTATGTATGTATGTATGTGTGTTTATATTTTCCTCCCTTGTTTAATTTTAGTATATTCAGATGTTGATAACGTTACTTCAATTATGACCATTAATGATGTTTTAGCAGTAAGGGTTATAAATACACATTATAAATACAGTAAATAAATGGACATCCATTTAGAAAGTGAGAAGTCATGTAAATTATATTTCTGTTCATAATATAATACAGAGTGGAAAATTGGTAACACTTTACAATGAGGTTGTATTAGCTAATGTTAGTTAATGCCTTTACTTACAAATATGCAATGAACAATACATTTAATACAGCATTTGTTGATGTTAGTTAACGTTCCTTAATGAAGATAGTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ercc4hg69/hg69Homozygous♀+/- ♂+/-Fig. S10 from Ramanagoudr-Bhojappa et al., 2018
ercc4hg69/+ (AB)HeterozygousUnknown
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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