Genomic Feature
hg48
- ID
- ZDB-ALT-170809-16
- Name
- hg48
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Sood Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 8: 23733428 - 23733429 (GRCz11) (1) Details
- Nucleotide change
- GG/-
- Variant Notes
-
Deletion 2 bp in exon 2, cDNA: 472delGG,
p. G158RfsX7.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2 bp deleted in Exon 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TAGAAGTCACTAGTTAAATAATTTAAAACGAGACAGAATATCTTAATATTTCAAATCACCTTTATAAATTTAAATCAATTTATTTCATCAATTTGTAAATCAAATTACACCATTATTATAGTCCCTGAAAACTTGATTTAAAAATGTAAAAGAAGGTTAAACACCTGTACACATGCATAAGAGAGTTAAATGAAATATTTTATGTGATCATTACTTCTCTTTTGTTTCACAGGAAACCTTTGGCTTGTGTTTTCTCGGATGTATTTAAGCGGAATCTGCTGTGCTTTTTGCACCTGATTCACCCTGGATATCCTAAAGACCGTGTTCTCCATCTGCTCCAGTGTCTGTCTGAGGAGGACGGGGGAAATCAGTGGGCTTCTGCCTTAATCACGCAGCTCAAAAGAGATGTTGAGGGGGCTAGGAAAGGGACGCTCCTGTCCTCAAACTGTACAGAAACACTAAAGAGTCTCTGTGGAAGATTTCGGGGTACTGATGTACAG
GG/- AGGGTGGACATCTTGTTTTGAGGCCCTGGAAGCAAAGGGTGAAGAAACAGACATGTCAGTTTTATGTCAGAAAAAACGGAAAAGCGACAAACTGGATCTTGATGGAGATGCACAGAAAGATCCTCAAAGTAAAAAGGTAAAAATGGATTTCTCTTCAAGTAAAGATGAAGAGGGAATGATTGAAGAGGAGGAAGCTGAAATCAGAAGATCACAGATGGATCAGAGCGCTGGCTCTGTGTCACAGGCTCGATCTGATCTGTTAGGCTCTTCAAAAAACTTGCCAGACCACATGAAGGTAATTTCATGGATGCGTATACAACCTGTTTTTCATCAATTGACTATTGAATTTTCAACAGCACTACCATAGAAAAGTCTTGGCTTCAGGATGTTCAACTTAACATCACATGATTAAATTATATTTATTTTTAAATATATTCTAAAATAAAAGGGTTATTCTCAAATCTATTGTTTTGACCTAAATATAAGCTTGATTATGCCAT - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
fancehg48/hg48 | Homozygous | ♀+/- ♂+/- | 2 figures from Ramanagoudr-Bhojappa et al., 2018 | ||
fancehg48/+ (AB) | Heterozygous | Unknown |
1 - 2 of 2
Show
Supplemental Information
- Genotyping protocol
- None