Genomic Feature

cl201

ID
ZDB-ALT-170608-19
Name
cl201
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Engle Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Insertion
Variant Location
Chr 5: 65949112 - 65949113 (GRCz11) (1) Details
Nucleotide change
-/T
Variant Notes
dn9 chr5:68937959insT; Exon 3 insertion of T at position c.434. This causes a  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted at position 434 in Exon 3 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation: Cys>Val at position 106 (1)
Sequences
Flanking Sequence
CAGCTTAAAGTGACATTTAAAGGCTTAACTATAGTTAATTAGGCAAGTCATTGTATAACAGTGGTTTGTTTTGTACACAATTGAAAACAAATATTGCTTAAGGGGGCTAACATTACATTAAAACATTAAACATTAAAATGATTTCTAAAAAATTAAAAACGTCTTTTATTCTAGCCAAAATAAAACAAATACATTTTTTTCCAGAAGAAAAAATATTATAGGAAATACTGTGAAAAGTTCCTTGCTCCATCATTTGGGAAATATTCGAAAAAAGAAAAACAAATTCACAGGAGGGCGAATAATTCTGTAAATCTATTTATGATAAAATAGACGTGTCAAACAGTGTGATGCAAAAGGCTATTTTTCACGAGCATGTTGACAGGTGTTTACATTTTGCATTCCACTTTGACGTGTCAAGTATTTGCTTTATTTGCAGCGCTTGGGGATTTCGATGAGCCCAAACGCTCTTCGCTCACCATGTTTGGGGTGTTGACCGCAGCT
-/T GTGAGGATCTACCAGGACCGACTGGGATACGGCATCTACTCCGGCCCCATCGGGACAGCTGTCTTTATGATCACAGTCAAATGGGTGAGTTTGAGACACGTCAGATGGGTCAGATTCTTCCAGTTAAGGTAGAGTTGTCCTGGAGGGCCAGTGTCCTGCAAAGTTTAGTTTCAATCCCAATCAGACACACCTGGGCTAGCTAATCAAGCTCTTACTAGGCTTTCTAGAAACATCCTTGCAGGTGAGTTGAGGCAAGTTGGAGCTAAAATCTGCAGGACACACCGGCCCTCCACGACCGAGTTTGGACACCCCATGAGTTAAGGAATTAGTTCATGTGAATGACGATATCTGTGAGATGGTCAAAGTTGTCCACATTAGTTTACACAGAATTTTATTTTATTTATTTATTTTTTTGTTAATAAAAAAATAACAGATTGTATGTACATTATATAACAGCAGTACATTGTAAAAAGTAAGAAGACTTTCGTAAAAAAGTGAGCA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
mymkcl201/cl201 (AB)Homozygous♀+/- ♂+/-2 figures with image from Di Gioia et al., 2017
1 - 1 of 1
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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