Genomic Feature

fl4

ID
ZDB-ALT-170303-1
Name
fl4
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Fadool Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 7420096 - 7420108 (GRCz11) (1) Details
Nucleotide change
CTCGGGCCACCTG/-
Variant Notes
mutation is in the SIX domain of Six7
c. 217_229del CAGGTGGCCCGAG, p.  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
13 bp deleted from position 217 to 229 in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CTAAAAAATTTTTTTTACATTGTACATGTAGATATTACTATTTTTAAACAATCCCCAGCCCCAAATGACATGATTTGAATCTTTTTCCGTAAGTTGCACTACTTCAAGTGTAGTTTCAGTACTTTTTGGTCTCACCTTAAAGCAGTGTGTCTTCTGCTCTCCATCCCAGATTGTCCTCGGCAGGGGGAACTTCTTACGGATGCGGTACTTCTCTACCGGGCCGAGTGGTCTGCCCCTCAGGCGCTCCGCCTCCCGGTAATGCGCGTCCAGCCACAGGTCCTGCAGTTTAGCGTGAGATTCGCGGGTAAACCGGTGACTCTGCAGAATCTGATAGAGCGCCTCGAAATTCCCGCCATGGAACGCGACGAGAGCCCGCGCGCGCATCACCGACTCATGACGGTTGAGCAACTCTCCGGCGGAACCGGGCACGGCGGCGGGCAGAGACCAGAGAAACCGGCCCAGGCGCTCGATATCTCCTGTTTCCTCGAGATTCTCGCACA
CTCGGGCCACCTG/- CTCAGGTGTGAACATCGGCAGAGGAAACATGGCTGTAGGTTTGTCTGACTAATTTGAAAACTCGCGCGCCCGTTTATACCAACGGCATTCCAGTGTGAGTAACGGACAACCAACGGCCTGAACGACTATATGAATGACTATATAGCTGACCGGTTATATAACGGAGCGACTGGATTCTCGGTAGGACGAATTCTCTGTAGGTCTTCTTAATGTGACATCTTCTAGTAAAGGAGGAGCAGCAGAAGTCAAGCCTATTTATAGAGAGATTCAATTAGCATCTTTGTGCTTGTTTTGAGGGGGATTATGCGCCTCGGTCATTAGCCTCTTAGCAGGGGGTTTGCTGTTCACGGAGGACACCGACTGGATGATCAGATTGTTAGACTCACTAACTGACTGACTGACACAGACTTCATTTCATTGTGCTGGATAAATGGACCTATTATGGAAACGACCCAGTCAGTGAAAACTGCTCTGCGCCTCCATATTTATGTTAGTGTTCA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
six7fl4/fl4Homozygous♀+/- ♂+/-Fig. 4 with image from Sotolongo-Lopez et al., 2016Fig. 4 with image from Sotolongo-Lopez et al., 2016
six7fl4/+; Df(Chr7:ljr,six7)p23ahub/+ComplexFig. 4 with image from Sotolongo-Lopez et al., 2016
1 - 2 of 2
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.