Genomic Feature

zf676

ID
ZDB-ALT-170126-1
Name
zf676
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with TALEN
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 21
Variants
Variant Type
Small Deletion
Variant Location
Chr 21: 22556787 - 22556791 (GRCz11) (1) Details
Nucleotide change
TCTCT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
CAATCCTGGGTCCAATCACTAATGATATAATCTCCTACCTGAAAAGTTGATCGAGTTTATCAGCAACAACTCTCTGTCTCTCACTCTCTCTTCTCTCTCGAAGAGTCTTGGCTCTTTCATGCATCTTAGCCTGCCTCTCCAACACTGTCTCTTTTTTTGCCTCCATCTCCTTGAAGAGTTCCAGTTCCTCTGACTCCAGCAGTTCACGAAGCCTGGCAAAAAAAAAAAAAAAAGACAAAGTCATTGCATTACAATGAAAGTTTTCTTAATAATTCATGAAGTTATTCCGTTCAGACCTTTCCCTCTTTTCATCAATGCCCATCTGGTACTGATCTAGTGCATCTTGTAGATGTCTGTTAACAGTGGCAGACACCACACGGCGCTGTGTGTTTCTTTCCCATCGCATTCTCACATCACATGAGCTTTGATCTTTGGTGAACTCCAGCACCTCGCCTCGCGTCGCCTCCTGCTTCCTTCTCCTTACAAATATGTCATCTATG
TCTCT/- GGATAAAGGAGGTCTTGCTTTCTGAAATGTACAAATTTGGAGTGAATTCATAAAAGCTCCATTCATAAAAATGTCTTTTCTATCTTTCTACCTTCTCTCTTTTACTGAAGACAAACTTATGTTAATGTCTATCTAATGTTGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATTTCTCTTTGGGCACATAAAATTTATGTATAATGAAAATGTTTTACTATAGTTACTATAGCATAATATTATAAAATAGTAGGCCTATCATTGTATACATTAATGTATAGTATATGCCTGTCTGTTATGATATAGTAGGCCTGATTGTATGGTTATGTATTACTATATGACTATTAGAATTATTATTGTATAATTATTATAACGTTAATATATTCAATATAAAACATGTAACGTTAATAATGGTCAACACAAATAACTC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cfap53zf676/zf676Homozygous♀+/- ♂+/-Fig. 5 from Silva et al., 2016Fig. 5 from Silva et al., 2016
1 - 1 of 1
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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