Genomic Feature

cwr1004

ID
ZDB-ALT-161101-5
Name
cwr1004
Synonyms
  • cwr4 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Alagramam Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 15
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 3956519 - 3956525 (GRCz11) (1) Details
Nucleotide change
CATGTCC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 0 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
ACCCTTATGTAACTGTGTGTTAATCTAATATTTTGTGCATTTGGGTGGGATTTGGACAACTTTTGCGATGGAAAAAGTCAGCTATTTGGCAATAGGGCAAGGTTAGGGACAGGTTTAGTGGTATATTGGTAGATTTAAGGGTGGGTTCAGGCGGGTCAACAGTACAATGTAAACATGTAAATGTACACATAAGTGCATTGTGTCACTTAATTTAATGTACATTTCACACAACTAACAAACCATTAACGACTTTTAGCTCAGTAAACTACAAATTAGCTTCTTATTAATAGTCAGTAAGGTATTAGTTGGGTTTAGGTTTGGGTAGGATTAAGGCCAGTTAAAATAAACTGAGACCTCTTTATTTAATCTAATGTGGTTTTCGCAGCCTATTAAGCCCCTACTCTTTAAGTTCATGGTGTATTTGAAATATTTTCTAATATGATGAAGTTACTCACATGAAAAATAAAAGGGTCTGTCTCCCAGACCACATTGTTTCATCC
CATGTCC/- GTGAAAAAGTCCGTAGTTTGCCTTTCCGATGAATTTACCCAGCTCTGCCCCGGACGCGTTAACAATTTGAGCTCCTGTTTTACACAAAACAGCCGCTTGAACCCAAAACTGAGTGCCCATTGCAGCCGCCACGACTAAAACACAACCAAAACAAAGCACCCCGGCGATGGAGAATATAACTTGCTTTTGACGGTTAGGCATTGTGTTTGGACACGGCGACGCGCACAGCCTCATCAGTGGAAATCCAAACTAAGACGCGCACTGACAATCTTCATGCAATCCAACATGCTGTGGGTTTCTTTGCACGCCTGAATATATGAACGCTATAAAATGGTCTCTAATGATATGTAACACATGCTGTCAGAGGAAAGTTGGATCCCAATGTCTCCTCTGGATAGAGTTACGCCAAGCGCGCTCACTGTACTGCGTTACCAAGCAACCGCTCTGAATGTCTCGCGCCAGTGACCGCGCATGATGTGACCTTACACTGGACAGAGTTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
clrn1cwr1004/cwr1004Homozygous♀+/- ♂+/-2 figures from Gopal et al., 2015
1 - 1 of 1
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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