Genomic Feature
bns59
- ID
- ZDB-ALT-160728-2
- Name
- bns59
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Stainier Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 13: 52011843 - 52011850 (GRCz11) (1) Details
- Nucleotide change
- TGCCGCTG/-
- Variant Notes
-
Protein truncates at position 564 after 19 missense amino acids.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation: at position 564 (1)
- Flanking Sequence
-
TGATGCTCACAGCGCACACACACTCTTCTGCACGCCACCCTACAGCCCCACTTCCTCTCAGTGCTCTGACTTCCTGTCTGAAGGTTATGGCTCTCTGGAGGCGCTGGTGGATTCTGCCTTCTGCTCTCCGCCGTACCCGCCGCTGTTCCCCAACCCATGCTGCACCCCCACTGTCTGCCCACCGGACACTGCCCTGGACCCCGCTCGGCTCTGCCCGCCAGATTCTGCCCTGGACCCCGCTCGGCTCTGCCCGCCAGATTCTGCCCTGGTCCCCGCTGCGCTCTGTCCGCCGGACGCTGCCCTGGACCCCACTCAGCTCTGCCTGCCGGACGGTGCCTTGGTCCCTGCTGCGTTCTGCCCGCCGAACGGTGCCCTGGTCCCTGCCCGGCTCTGCCCGTCAGATGCTGCCCTGGTCCCCGCTGCACTCTGTCGGCCGGACGCTGCCCTGGTGCCTGTGTGTCGGCCACTGCAGGTGTGTGAGTGCCCTCTGGATGGCGCTG
TGCCGCTG/- GAGGACCTCAGCATGTTCCCGCTGCCGCAGGGCGGAGGCTCTCGTCTGATGCCGCCTGAAGCATCACCCACTACCGACACACACTTCTCGTATGATGCAGCACAGCAGGCGGGGATCGGCACGTTGGCAATGCAGATACACACACTCATCTGCAGCTTCGATGCGTACAGCGCCGCGCAACACACACACTCTCACCACACCTCCTGCTGGGCACCAGAGCCACTGCTGGACGAGGGCATCATCGACAGCATCCTCAGAGAGCTGGACAGCACACACACTAATGCACACACACTGACACACACACACACTGATGCACACACACTGACACACACACACACACACACACACACACTGATGCACACACACTGACACACACACACTGACACACACACACACTGATGCACACACACTGACACACACACACTGACACACACACACACTGATGCATACACACTGACACACACACACACACACACACACACTGATGCATACACACTGAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| npas4lbns59/bns59 | Homozygous | ♀+/- ♂+/- | 2 figures from Reischauer et al., 2016 | 2 figures from Reischauer et al., 2016 | |
| npas4lbns59/bns59; s843Tg | Complex | Fig. 2 from Reischauer et al., 2016 | 2 figures from Reischauer et al., 2016 | ||
| npas4lbns59/+; s843Tg | Complex | Fig. 2 from Reischauer et al., 2016 | |||
| npas4ls5/+; npas4lbns59/+ | Complex | ||||
| npas4ls5/+; npas4lbns59/+; s843Tg | Complex | Fig. 2 from Reischauer et al., 2016 | Fig. 2 from Reischauer et al., 2016 |
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Supplemental Information
- Genotyping protocol
- None