Genomic Feature

ct835

ID
ZDB-ALT-160415-1
Name
ct835
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Prober Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 13
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 30216009 - 30216019 (GRCz11) (1) Details
Nucleotide change
TGCAGTTTTAC/-
Variant Notes
This is a mutant with a 11 bp deletion in the qrfpra gene which introduces a  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
CTTTAAATGAATTTAGCTGATTAAATTAAGGTTATTGTTTTTATTATTTCATTTTTATAGCAACTAACAGTTGTAATAATGACGACAATTATGTTATTAGTAGTTTACATTGTCATTGAATTATATTTATAGGCTTTATTCCGTATTTTCTTTACCTATTTAATTTCGTTTGTTTTTTATTAAATAAACAAATTGTAACCTGGGCTACATCTCATCCATTCTTGAAGTGTCGAATTCCAGTGATTCGTTTTCAAACTCAGTGTGTTGTACAGCGTGTTTAGACAGCGAGTGTGAAATACTCAAACAGGTGTAGAGACACAGCCGATGTGTCAGAAGAAATACTCCGCATACTCCTGCTGCTGATTCAGTGTGAAGAGGCGCGAAGAGCAGAACTGACTAACAACAGCTGTAAAACTTTGATTTCTTTCTGGTCCCATTTCAAAGACGAGCATTATACATGGGGGATAAGAAGATTACTCCTGAAGTGCTGGAGCAACTAC
TGCAGTTTTAC/- AATCTTACCCGTCAGGAGTTCATCGAGACGTACCAGATCGAGCCGCTGGTTTACATCCCGGAGTTGCCCGCTGGCGCCAAAACTACGTTTGTTATCGTGTACACGGTGATTTTTCTGCTGGCTCTCGTCGGAAACAGTGTCGTTGTGTATATTGTGTTAAGAAAGCGAGGGATTCAGACCGCCACAAATATCTTCATCTGCTCTCTAGCCGTCAGCGACCTGCTCATCTCTTTCTTCTGCATCCCATTCACTCTCCTGCAGAACATCTCTTCTGAATGGTTCGGCGGTGAGTATCACTTAAAACGGTGCATCGCTGTGATGTTGTTGTCGTTGAAAACTTTTAGGGTTGATTTCATTCTAATTAATCTGTTAAATGATGATGATGAAATAATGACTGATTGATGAATTTGATAACTACTAGGCTATTCCAGTGTCTTAATGATAGGGTAGTTCATGGTATTGATCAAATAATAATAGCCATATCATAAAATGTTTTTCAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
qrfpract835/ct835; qrfprbct809/ct809Complex2 figures from Chen et al., 2016
qrfpract835/ct835; qrfprbct809/ct809; ct834TgComplexFig. 12 from Chen et al., 2016
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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