Genomic Feature
ct828
- ID
- ZDB-ALT-151228-2
- Name
- ct828
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with zinc finger nuclease
- Lab of Origin
- Prober Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 2: 13382651 - 13382655 (GRCz11) (1) Details
- Nucleotide change
- TTCTT/-
- Variant Notes
-
5 bp deletion (AAGAA)
ZFIN binding sites: TGCTCCACC and GAAGAATGT
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AAGGCACACAATAGAGAGACAGCCCATAACACAAGGATAACACGCTTTGCATGAGCACTCGTCGCAACATGTTTGGTGTGCAGAGGATGAATGATAGCTCTATAACGTTCTGCACTTAAGGCTGTAACATTGAGAACAGAGGCAAAGCAGACTGTCTCAAAGAGACAGGTTTTGAAGTAGCAGCCAGAAATTCCAAACAGAAAAGGATAGTTGCTCCAGAGCTCATAAAGCTCCAGCGGGAGGCCAAGCAACAGCACAAGGAGGTCAGAAATGGCCAGGCTGAACAGGTAGTAGTTTGTCGTTGTGCGCATGATGCGATGACGGGTAATGACAATACAAGTTAGGATGTTGCCCACCACACCTACTACAAAGATGAGCAGGTAGGTGACACATATAGGCAGAAAGAAAGGTGAACGACAGGGTCCAAGGTATTTCTCCAGGTAGGCACTGCGGGATAGACAGAGGTCTGATAGGTTTGCTGTTCTGTTTTGACATTCTTC
TTCTT/- TGGTGGAGCACCATGACGTGTTCACAACAACTGTGAACAGTGAACTTGGAGAGGAGCAGTTGTACTGTATCATTGATTATCAGATGAAAATTACCTATAGGGTTACAAAAAAAGACATACAGGTCAAATGCTTAAACTGTTATGTTCCACAATTTCAACAAAATATCATGTGGCACTTCAAATAATAATGAAATGAAATAACTTGCATTTCAAAAATTTATTTTGATTGATTTTAAAAAATCCTAATATTATTCACTCTTATTTTATTTATTTAGATTTTCAATTATATATTATTTTATAATTATATACTTATATTGATCGTTGATCATGCTAACTAATTAACCAGGTTGACACATGGAACCCTACAAAAATAACTAAACGGGTAAAATTTCACATCGAAAAAAAAAAAAACAATGAATTCAAAAGCAAGGTACTGGAACTTTCTACATATACACTTGCATATTTTTACATTATTTGTCATTTGTAATAATACATATACA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None