Genomic Feature

st91

ID
ZDB-ALT-150219-3
Name
st91
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Talbot Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 8: 14375488 - 14375498 (GRCz11) (1) Details
Nucleotide change
CTCCATTCTGG/-
Variant Notes
mutation in xpr1a is a 11 bp deletion causing a frameshift resulting in a stop  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
at position 15 (1)
Sequences
Flanking Sequence
AACATTTAATATTGTGTTGTATTATTATTTTCTTTTAGCGATTTATCCTTCTTTGTTTGAAATGTCCAGGCAGGTGTTTGACTTTTTTTTCCAGATGCACTGAACCCACAGCAAAATCACAATGAAATGAAAATCTAAAAAGATCAATACAATATAGACCTACGTAAATAAAAGTATATAGGTGGCAGCAAAAGTGAGCCTATATATAAATAAAAATAGCTTATAAATAAATAAATAGCCTAGAAAAAACACGAAGATAAAATAAGTAAAGTCAAATTTGATTCGACATTTGAGTTGTTTTCCAGAAATATTTCGTTTGGTATAATTTTTAAATCCATTATTCAACGCCTATTTCAATTGTAATATGTTGAATTCAAACAGCCCTCTGAAGTTGTGATTGGCGATAGGCTTTTCTGCTGTCAGTTTCTTCTCAACGCAACAACAAGAAGCGAACAGAAATCCTAAATAAATCTCTCACCTCATACTGAATGTACTGTTTC
CTCCATTCTGG/- AGTAATATGGGCGGACAAGTGCTCCGCAAACTTCATGCTGGCGGAGCAGAAATCCAGTCAAACTATAATAATATCCTCAAAAGCGTCTTCTTCTTGTTCTTCGCGGCTTTTGTTATTATTTCTGTCACTAAGTTACTGAGCCTCACGCGTCGCGTTGCGCTCTGTCTAAATCCTGTCCGGTCTCTCGCAGTCCACTATTCCCCGGTCCCGCATACTGTATTACCCCGTTCAAAGTAAAACCCGCAACATAAGGGGACTAAAAGTGACCTCCTGCTACTCCCCGAAACAGGTGCCTGAATGACAGCAGCGGGAGCGAGAGTCTCTGGGAGTGACTTTCTCTCTTCGGACTCTCTGCGCGTTCGTATGAGCGCTTGTTGTCCGCCATCAGAAGCGCGCTCTCGGTGAAAGACGTGTGTGCGTCACAGTGCGCCGTGAGCTGCGTTTAAAAAAAGCTGTTTAAATTTTTATCATGCCTTTTGGTTTAATATACTTCAAATACA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations