Genomic Feature

sa23805

ID
ZDB-ALT-131217-17349
Name
sa23805
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation
Protocol
adult males treated with ENU
Lab of Origin
Stemple Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
European Zebrafish Resource Center (EZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 20
Variants
Variant Type
Point Mutation
Variant Location
Chr 20: 46437325 (GRCz11) (1) Details
Nucleotide change
C/T
Variant Notes
Premature Stop codon in the region of the Rec A domain
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
C>T in Exon 7 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TATTTGTATAATCTCTAATTGAGATATGAAGTTGTTATTGTGTAATATACTTTTATCTTTAATAATCTTGCTGATGTGGCAATAAACAAACCAGTGAGACGGAGTGTGTGCTGTGACGTCACACACTCTTGATTTCTGGTTTGGAAAAAGCACATCAAATTTATGTTTTCATTTGTTAGTTGTTTTTAATTGTGTGTTGATTAATTAAATGTTTTTGCCATGAAAATAACCTTAGTTCACTGACATGACATTAAATAAAAAATACATCAGCATCAACGTTTCTAGTTTGGCTTTATAGGAAACAGTATAGCAGCAGTAAGGCTTTAATATGTTGTGTGTTTTATCAGAATGCACAGAGCAGTATTATAACAGTAGCCTAAAATCTATTTAGTATGAAAAATGACTGAAAATCAGTTTGTTGTGTCAGGTATGGTCTGGTGGGCAGTGATGTTCTGGATAACGTGGCCTACGCCAGAGCCTTCAACACTGACCATCAAACA
C/T AGCTGCTGTATCAGGCCTCCGCTATGATGACCGAGTCCAGGTAACACACACAATCTCACTCCAGGTAACACACACAATCTCACTAGCTGGGTTTCCATCCACAGATATGCAATAGATTTATGCACAAATCTAGAATATGGCATAAAACATTTGTAAATAAAGCAGCGTTTCTATCCAGTGAGTCAAAGAGAAGAAAATCATCACTTCCTGATAAACTGCCGCCAAATACCAAAAAGAAAAATGAATTTGCATCAATAGGAGAGTCCACTGTGAGCCTTCTTTCTCATAGAATAAATTACTTTATTACTCAAACAATGAAGATGAAACATACAATGAGGTGTGAGATGCTCTTTGCAAGCGCCGACACTCGAGACAGTTCTGGAGGTAATAATAATAATACTGAGCCACTGTGATGACAGACTTTCCCTGAGGGATTTTAGAAATAACATTTCAGATGTTTTACAATGTGCTTCGTCTGCTGCTGTCCATTAATGCTGTCC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
rad51sa23805/sa23805Homozygous♀+/- ♂+/-8 figures with image from Botthof et al., 20172 figures with image from Botthof et al., 2017
rad51sa23805/+Heterozygous♀+/- ♂+/-Fig. 4 with image from Botthof et al., 2017
rad51sa23805/sa23805; la2TgComplexFig. 3 from Botthof et al., 2017
rad51sa23805/sa23805; la781TgComplexFig. 3 from Botthof et al., 2017
rad51sa23805/sa23805; tp53zdf1/zdf1Complex2 figures with image from Botthof et al., 2017Fig. 5 with image from Botthof et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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