Genomic Feature
ct815
- ID
- ZDB-ALT-131125-4
- Name
- ct815
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one insertion (1)
- Protocol
- embryos treated with zinc finger nuclease
- Lab of Origin
- Prober Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 19: 17834626 - 17834627 (GRCz11) (1) Details
- Nucleotide change
- -/AGAA
- Variant Notes
-
4bp insertion
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 4 bp inserted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ACACACACACACACAAGCATGTACATACATGCTCCTGCCACCACTTTACTTCCTGCCAAATCGAAAGCCAAATCCACCTTTCTGTCTGTTGAAGGCTTGCAAACCTCCTGCAATGGAAGTGAGTGCCTCATTCCGTTTCTCTCCACCTACTTCTTCAGCCTCACCGCCCTGTGGGTAGAGCAAAGGCATTATATGGTTGTCTGGGAATGTCCCCATGGGTCTCCGTTCCAACTCCTCTCTTTTCTGGCCCTTTACTATGTCCCTCTGTTGCCTTTCTAGTATTTCATTTACTCTATCCAAAAGCTCCTCAGATCCCAGGTCCTGAAACAAAGCCCAGGGCTGGAGATCGGCCACTGGTCTGCCACCTGGAGCCCCTAGTGAAGCCTGAAGCCGGAGCATTGCTGCTTCCCATTCAGGGTTGTACAGCCTAGGCAGGTAAACCATTGGTTGGTGTGGCAGCATTAGACTTCTGGGAGGATGAACCAGTAGCACCAACAAGAA
-/AGAA GAAGACTGTGGTCTGAAGAGTGGACGAAAGATGAAAAACCTGGATTTTCATCTGAAATTTAAGGAATAATTTAAAGTTGAGAGAAAACATCACCCTGAACTGACCATTTTTGTTTAAATATTAAGGCCTTTTTAATACTTACTGTACAGAGTGTTCTGAAACTCTATCCATCAGCGATCTACATCCAGCTTCTTTAAATACTCCACACAGACTAGAAGTGAATGTGTTCTATGACAAAACAGCTGTTTGTTAATTGGTTAAAACATCCCTGTGACGCACAAGACCATCTCCACAGTGTCATCAACATTCCATTAACCAGGATACAGAGTGACCTTAACTGGCAGAGGTAAAGTGGACAATTACTGAATAAGTGTATATGCAATTTAACACACACACAAACTATACAAAGCCTCAAGTTAGTTTCAAGTTTGCACCTTGCCAGGAGGTCTGAGAGACATCAGCAAGAATTTTGCACTCATCTTCTTTTAGTCATTGTGTAAA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| qrfpct815/ct815 | Homozygous | ♀+/- ♂+/- | Fig. 10 from Chen et al., 2016 |
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Supplemental Information
- Genotyping protocol
- None
- Chen, A., Chiu, C.N., Mosser, E.A., Kahn, S., Spence, R., Prober, D.A. (2016) QRFP and Its Receptors Regulate Locomotor Activity and Sleep in Zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 36(6):1823-40
- Chen, S., Oikonomou, G., Chiu, C.N., Niles, B.J., Liu, J., Lee, D.A., Antoshechkin, I., and Prober, D.A. (2013) A large-scale in vivo analysis reveals that TALENs are significantly more mutagenic than ZFNs generated using context-dependent assembly. Nucleic acids research. 41(4):2769-2778
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