Genomic Feature
ua5001
- ID
- ZDB-ALT-130724-2
- Name
- ua5001
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with zinc finger nuclease
- Lab of Origin
- Allison Lab
- Current Source
- Other Pages
Notes
| Comment | Citation |
|---|---|
| ua5001 is a 4 base pair deletion in the prnprs3 gene (a.k.a. prp2), resulting ... | Fleisch et al., 2013 |
Variants
- Variant Type
- Delins
- Variant Location
- Chr 25: 3681793 - 3681801 (GRCz11) (1) Details
- Nucleotide change
- ACCCTGGTG/CCCTG
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp inserted / 9 bp deleted (1)
- Transcript Consequence
- Frameshift (1)
- Protein Consequence
- None
- Flanking Sequence
-
GTTTAATATTGATATATTTACATAGCAATTTTCCATTTAGTGAGTGTGTTTACATAATATGTTGGTCACCACATCCAGTTTAATTTACTGCTATGAATCAGTGTTTCCTATTATATGCAAAAGCTATGTACGGTATAAACTTAAATAAAAAAATTAATGATGTTGTCAGATAGTTAAATGTCTGATGGAAGTTTTCTCATGTTATTGAAACCATCTCTCTTTTTCCATGCAGATGGGTCGCTTAACAATACTATTGCTCTGTCTGGCTCTTGTGGTGTCAGTTGTGGCCAAACGCGGGAGTGGATCCAAAGGTGGATTCGGCTGGGGTAAAACTAGTAGTAGTTCAAACAAAGGTGGAAGCAGCTCCGGAAACAAAGGTGGCAGCAGCAGTAGTAGTAGCAGCAGCAGCAGCAGTAAAGGCACCTCATCACATGGGACACACTCATCCCCTGGAAACTATCCTCGCCAACCTCAAGTACCAAACCAGAATCCACCTCCCT
ACCCTGGTG/CCCTG CTGGAGGTGGGTACCCTGGTCAAGGAAGATATCCACCAGCAGGCTCTAACCCAGGATACCCAAACCAAGGGAGCTACCCAGGACGTGCTGGATACCCTAACCAAGGTGGGTACCCAGCCCAAGGTGGATACCCAGCCCAAGGTGGCTATCCTGCGCAAGGTGGCTATCCTGCGCAAGGAGGTTACCCAGCGCAAGGTGGATATCCACAAGGTAACTACCCAGGACGTAGTGGTTACCCAGGACAAGGTGGTTACCCAGCACAAGGTGGCTACCCAGGCGGAGCATCATATCCTGGAGCAGGGTCGTACCCCAACAGGTACCCTGGTGGAAACCCTTACCCAGTTGGTGGGTCCTATCCAGGTTATCCAGTCCGAGGAGGTTCCAGTCCTAACCAGTTTGGTGGAGGTGTTGGAGGAGCAGGCGGATATCCTGGAGCGGCACAGTATCCAAACTGGAACCCCAACAATAAAATCATGAGCCCAGCCTATGGCGGCAACTAT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None