Genomic Feature

sbu48

ID
ZDB-ALT-130709-1
Name
sbu48
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Sirotkin Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 20
Variants
Variant Type
Insertion
Variant Location
Chr 20: 25930417 - 25930418 (GRCz11) (1) Details
Nucleotide change
-/AAGTACA
Variant Notes
This allele contains a 7 bp insertion, which produces a frameshift that is  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp inserted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTTTTTCTCATCCCTATGTATGTGTGTACGTGCATGCTCTAGAAGAGAGGTGCTGTTTGTCTGGGATCATCTGGCAATATGCTGATGGAGTCCTCTGCTTTTCCACACAACATACACAACATTGTGTATTCCTGACAAAATAAAATAAAAATTTAAAAGTGTGAGAGAGAGAACAAGACTTGTTAAACCAACAAAATTTTTAACATCTATATGAAAGAAAAAAATACATATATATATTTTATGTTTTCCATATAATTATTAAACTTTTATAGATGGGCCAGCATGTTTATTATGAAGTAAATATATTATGTAACTTGTCAATTAAATTATGCATTAACAAACAAGAGTAATAATTTCAATGTCACACTAATACAAATGTATATATATATATATATATATATATATATATATATATATATATATATATAAATCTCTAATATACTTAATATGCTGTTTGTTTTTTCCTGTGAAGCGAGGGCTCACCTGATAGTCATCCACCAC
-/AAGTACA AGTGAAGGTGTACTCGTGTCTGGCTATGACATGTTCACAGTTCTTGCACATGTCTGAGGAAAAGCAAAGTTCACTCATTATGACCACTTGTAGAGCATCATTATTTACATGCAATAATGTGACGTCACTCACGCAGGTAAGTGACAATCTCCTCCTCATCTTCATTCACCATCGTCCGGTCACTGATCAGCACAAAGTCCCGCTGGTGACAGTTGGCACAGCCCACAAAATTCATGAGATATGAGCCATTCTCTAGACATGTGTTACCCTATATACACACCAGAGCAAAATTGTAGACAATCTGACATGTTTGTTCAGACAAGACACTGCAGACAGTTTTTTCCATGAACTAGGCAATTTTAAGGCTTTTTGGCACAGTTAAATGAAAATAAAACAACATTTTAAGTGTTTCCTTTGTTGCACTTGTGTTTGCAGATTTCAAAGGCGATGTATATTTTAAAGACCATTTTAAAATGATCATTTTGTGCTGCCTTGAGTAGG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
churc1sbu48/sbu48Homozygous♀+/- ♂+/-text only from Taibi et al., 2013
1 - 1 of 1
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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