Genomic Feature
sa16189
- ID
- ZDB-ALT-130411-4691
- Name
- sa16189
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation
- Protocol
- adult males treated with ENU
- Lab of Origin
- Stemple Lab
- Current Source
-
European Zebrafish Resource Center (EZRC)
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Zebrafish International Resource Center (ZIRC) ( order this ) - Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 11: 36743041 (GRCz11) (1) Details
- Nucleotide change
- C/T
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- G>A (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
TAAAGTTGACTGAACTTAACACAATCAAGTTGTCCCAAAAGACAAGAACTATGTTATTGCTCATTTTATAAAAAAGGTTAAACAAACAGCAAATGTATTTTTTTTAGTGTAACTTAAACTCACTGCAATAATGTTGAAGAAGTCATCATCGCCGAGTGTGTCCAGTATTGAAGCAACCGTCTGTCTGGCTATAGTCAGTCTTAAACCCTTCATACTGCCACTGACGTCCACTAGAATCACAACATCTTTAGGTGAAGTGGCTGCTTGGATATACCTAAGACGACAAGAGTTCATGTTTAATCAAGATTATTCACAGGCTAATCTTGATTCTATGCTTAAAATTAGACAAAAGCTTATTGAATTTAAAAATGAATACACTAATACACTCATCACCTAATAACAAATAAGCCAACAAAAGAGAATAATTTGAACAAAAAAAGTCATTCATACCATTTTCTGTTTCTGCAATCAAATGCAATGACGCCGTGTTCGTCAGGATA
C/T CATTTCACGCCTGAAAACACACATAATGTAAAGAATTTATAGTAATTCACAGGTTGACACTCTAGTGATATATTTCCCATTACTGTCTCAGAACTATTCCAACTAAAATCATTAAGCTTGCAGATGCTTAAGTTATCTCCAGCTCAGCTTTTTAAATACATCTGTTTAGCACAAATAGCTAATATGTGTACATTTGGCACAATGCTATAAGACGCAAGATGTGATTTAGTCCGCCACAGGCTTTGATTAATGGAATGAATTTTCTCAATGTCCTCTCTGGTGGTCTGTAAAATTAAAACATTAGTGAAATCAGCCAGTTTGATCTTCATCAATTCCTGCGCTGACATAATGCCACGTTACGCACCTGGGTATTGTCGGAAAAAACCTTTAGCGCTTCCAAAGTACTGCCAGATGAGGGTTGGGTCTCTCCTGAAGTTATCCACGAAAACTTTGTTCAAGGCTTCCGACCAGTAAACTCCATTGACTATGTCAGGATCTAA - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
cacna2d3sa16189/sa16189 | Homozygous | ♀-/- ♂+/- | |||
cacna2d3sa16189/sa16189 | Homozygous | ♀+/- ♂+/- | 3 figures ![]() | ||
cacna2d3sa16189/+ | Heterozygous | ♀-/- ♂+/- | |||
cacna2d3sa16189/+ | Heterozygous | ♀+/- ♂+/- | 3 figures ![]() | ||
cacna2d3p177/+; cacna2d3sa16189/+ | Complex | 3 figures ![]() |
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Supplemental Information
- Genotyping protocol
- None
- Nelson, J.C., Shoenhard, H., Granato, M. (2023) Integration of cooperative and opposing molecular programs drives learning-associated behavioral plasticity. PLoS Genetics. 19:e1010650e1010650
- Santistevan, N.J., Nelson, J.C., Ortiz, E.A., Miller, A.H., Kenj Halabi, D., Sippl, Z.A., Granato, M., Grinblat, Y. (2022) cacna2d3, a voltage-gated calcium channel subunit, functions in vertebrate habituation learning and the startle sensitivity threshold. PLoS One. 17:e0270903
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