Genomic Feature

ha2

ID
ZDB-ALT-121012-1
Name
ha2
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Kikuchi Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 8
Variants
Variant Type
Point Mutation
Variant Location
Chr 8: 16258780 (GRCz11) (1) Details
Nucleotide change
A/T
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
T>A at position 262 (1)
Transcript Consequence
Missense (1)
Protein Consequence
Amino Acid Substitution: Cys>Ser (1)
Sequences
Flanking Sequence
TTATATAAAACATATGTTCAATTGTACTTTAAAGGGAATTATGTTCTTAAACTGGCTATAACATGATAATTTAGCTCTCTAAAAAGCTGGAATATTGTGTGCTCTTTTTTTCAACATATACTGGATTCTGTAACAAGTTGCATTAAATAATGCCAGTACAAATATATATTTTTATTAATACTATCTTCGTTATAATATGGAAAACTAAAAGGTGGATCACACTTACTGCTTCCAACTAAAATCTTTATTTTTAAGTATTTCCATATAGGCTATATGATCATAACGTTTCTACTTACCAGAGTTTGATTCGTTGCTAACTGGGCCGAAGACCTCGTAGTTTTGCCGGGGAGGTATGATGCCGTTGGCAGCGGCAAGGGCCAGACCCTCTGCTGTGCCGTAGAGCAGCTGGAGCTCTCTCGCCTCGTTCTCCTCCTGCGCCTGCTGTCTGCGGAGCGCGACCTGAGCGGCCATCACGCGCTGTCTCTCCGCGATCAGGGTGC
A/T TTTGGCACACATACAGTCTTTCCATCTGCAGTAGCGCTTATGCCCCTTGAGCGCGGATACCACGCCGTGATTCCTGCACCGGGCGCACTTGGGCGTCCTTGGATACTTCTCCGTAGCGCGAAGCAACAGCGGCGGGGCCCTTAACAGGCTACCTGCCATTGAAACTGGTATGGAGGCGGCAGCGGCCGCCGCAGCAGCAGCGCCTGGATGAACCTGCGACCCTGCCTGAGAGGCGGGTGGGATCTCTGGACGAAGATCCATATTCTCCGAATCAACAAACAGCGGATCGATAGGTTAAAATACGTGCGCAACCGAAGTCTTCGATCGGAGACGTTTCATAAGCATTGGCCAGAATCGATACAAGGTGAATATCTTCAGTACAGCATTTAAAGAACACAGCCCGACTGCCAGTGTCCAAGAAGAAAGCAGAAACCAATTTATTATGAAAGTCCTCTTTCCAGCGAGATCTTCAACTTGTTGCGCACAGTCCACAAGCAGCC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
dmrta2ha2/ha2Homozygous♀+/- ♂+/-8 figures from 2 publications8 figures from 2 publications
dmrta2ha2/+Heterozygous♀+/- ♂+/-4 figures from 2 publications7 figures from 2 publications
dmrta2ha2/ha2 + MO1-her6ComplexFig. 8 from Yoshizawa et al., 2011Fig. 8 from Yoshizawa et al., 2011
dmrta2ha2/+ + MO1-her6ComplexFig. 8 from Yoshizawa et al., 2011
dmrta2ha2/ha2 + MO4-tp53ComplexFig. 8 from Graf et al., 2015Fig. 8 from Graf et al., 2015
dmrta2ha2/+ + MO4-tp53ComplexFig. 8 from Graf et al., 2015Fig. 8 from Graf et al., 2015
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Supplemental Information
Genotyping protocol
None
Citations