Genomic Feature
sa1871
- ID
- ZDB-ALT-120411-301
- Name
- sa1871
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation
- Protocol
- adult males treated with ENU
- Lab of Origin
- Stemple Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 3: 25508630 (GRCz11) (1) Details
- Nucleotide change
- G/A
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- G>A (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
TACACTCATTTCATTTGATAAAGTTGACTGTTTTACAGTGTAATAAAGCACTTTACATTGACAAACACTTCAACTTCTCTGTTGTTTCCTGCAGACAATGACGAGCAATATCACAATGTCCTCATGCCAAGCATTTATGGAGTCATCTGCTTCGTGGGCATTATAGGCAACTGCATCGTCATCTACACTATCGTCAAAAAGACAAAGTTCAGAGCCCAACAAACTGTGCCCGACATCTTCATCTTCAGCCTGTCCATTGCTGATCTTCTGTTCCTCCTGGGCATGCCGTTCCTCATTCACCAGCTAGTAGGCAACGGCTCCTGGTGTTTTGGTGCCACCATGTGCACTGTTATCACAGCGCTGGACTCTAACAGCCAGATCGTGAGCACTTATATATTAACAGTCATGACTTTGGACCGATACTTGGCGACAGTCCATCCCATCCGCTTTAATCACATTCGCACTCCCCGTGTAGCCGTGGCAGTAGTAGCGCTGGTGTG
G/A ATCCTCTCACTGCTCTCCATCACCCCAGTGTGGATGTATGCGGGTCTCATGCCCTTACGGGATGGATCAATGGGATGCGCTCTGCTTCTTCCCAATCCAGCCACAGACACCTACTGGTTTACGCTCTACCAGTTTGTGTTGGCGTTCGCTTTGCCGTTGGTGATCATTTGCGTGGTGTTTTTCAAGATCCTCCAAAACATGGCGGCCACGGTTGCACCACTTCCCCAACACAGCCTACGTGTGCGCACTAGAAAGGTCACTCGGATGGCCGTTGCCATTTGCCTGGCGTTCTTCATTTGTTGGGCGCCTCATTACATCCTGCAGTTGGCACATCTGAGTGTGCAACGGCCCAGCTATGCATTTCTATTTGCCTATAATGTCGCCATTAGCATGGGCTACGCCAACAGTTGCATTAATCCTCTTCTTTACATCATGCTCAGCGAGACTTTCAAAAGGCAGTTTATTGTTGCCATCCGGCCGGCCCACAAGGACTTCCGGGC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| mchr1bsa1871/sa1871 (TL) | Homozygous | ♀+/- ♂+/- | text only from Busch-Nentwich et al., 2012 | ||
| mchr1bsa1871/sa1871; mchr1azf3170/zf3170; igfn1.1nkgsaizGFFD109AGt; zf3262Tg; zf415Tg | Complex | Fig. 4 from Leung et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None
- Madelaine, R., Ngo, K.J., Skariah, G., Mourrain, P. (2020) Genetic deciphering of the antagonistic activities of the melanin-concentrating hormone and melanocortin pathways in skin pigmentation. PLoS Genetics. 16:e1009244
- Leung, L.C., Wang, G.X., Madelaine, R., Skariah, G., Kawakami, K., Deisseroth, K., Urban, A.E., Mourrain, P. (2019) Neural signatures of sleep in zebrafish. Nature. 571:198-204
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