Genomic Feature
rk17
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 18: 22486004 (GRCz11) (1) Details
- Nucleotide change
- T/G
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- T>G (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ATCACTACTTTTATTGTATGCACAAAAACAGAATCCCTCTTCAAAACATCTTTGGTGTTCTTCAGAACAACTAAAGTCGTGCAGATCTGTTTCAACATGAGGGTGAGAGTTTTTGTAGTGCTTCACAAGAGCAAACCTCTTATGACAGGTAATATCACCGGGAAGCTAGCAAGCCTAAAAAAAAGAAACAAAAACATGTGCAAAATCACTTTACCACCTGAGTGGCTTAAAAAAGCTGACATTTACCAACACCCCACTGTCCTCGCTCGGCTCCGTTAGACTTCATTCCAAAACACAATGGGGAAAGGAATAACAGTTGAGTGAGGAATAACAGTTGCAAAAAAGAAATGGTTTCCAATGTAAGCAGCTATTGAACGCACACAGACACGAGAAACAGAGCAAGACTCAGTGTTTGTGTCTTGTCATTCTAGTCAAGGCGATGTTTGAATTCTCTTTATTTTTTCCTCCATTATCTCAGCATTCTCACTGTCTCTTCTATA
T/G GTGTCTGCAGGTACGTGGAGCGAAAAAACTTCCTCGAGCGAGTGGACCAGCGCCAGTTTGAGCTGGAGAAAACTGTGCGTCTGAACAATATGAAACGGTGACAAGAGGAGAGAGCAGATACACTCACTGATCAAAACACAGACTGTCACAGAATCACACTGCATACACTCATGCTTTTCAGTATTTTTTCTTAGCTCCTTAGTCCTCTGAAATCTGTCTGAATTCATATTCACATGTACATTTTGTTTATAGACTAGCTTCTTTTTTCGGATTCTACTCTTCCTTTGTCTAAAATTGCATCTCCACATCTATCATGACTTCTTTAATAGCAAAGTCGGCTCAAGGTGTGTGTGTTCTTCAACAAATGTCTCCAAAACATTTTAGAATCCACTGAAATACATCTTATAGTTGACATTTAAAGTGATAGTTCACCTAAAATTGCTTATTCTGTTAACGTTTACTCATCATTCATTCTTCCAATCTCACCTTGCTTCTGTTGA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| cfdp1rk17/rk17 | Homozygous | ♀+/- ♂+/- | 3 figures  from 2 publications | 5 figures from 2 publications | |
| cfdp1rk17/+ | Heterozygous | ♀+/- ♂+/- | Fig. 1 from Itoh et al., 2021 | ||
| cfdp1rk17/+; cfdp1nub36/+ | Complex |
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Supplemental Information
- Genotyping protocol
- None
- Itoh, T., Inoue, S., Sun, X., Kusuda, R., Hibi, M., Shimizu, T. (2021) Cfdp1 controls the cell cycle and neural differentiation in the zebrafish cerebellum and retina. Developmental Dynamics : an official publication of the American Association of Anatomists. 250(11):1618-1633
- Bae, Y.K., Kani, S., Shimizu, T., Tanabe, K., Nojima, H., Kimura, Y., Higashijima, S.I., and Hibi, M. (2009) Anatomy of zebrafish cerebellum and screen for mutations affecting its development. Developmental Biology. 330(2):406-426
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