Genomic Feature
t0621
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 9: 56172475 (GRCz11) (1) Details
- Nucleotide change
- C/T
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- C>T (1)
- Transcript Consequence
- Missense (1)
- Protein Consequence
- Amino Acid Substitution: Arg>Trp (1)
- Flanking Sequence
-
ACTCTCTTCCTCTGAGGATCATTGTGTTTACACACTTCACTCATTTTCTCTCGTATCTGTGCTCAAACTGGCGATCCTCGACTCATCTCTGCTCATAAAGGACTAGAGCTGTCCTGATGCTGCATTTGTACCAAATCCTCCCATTTCACATCACATTCAGCAGTTTACCTGGTTACTAGCCCTAAACTGCTCCTGGAGTGTGTTGCAAGAACCAATATTCTATTCTACCAATATTTGGGGGGGAAAACCCAATAAAATCTTTGATGAAATGTTTGATATTTATATATATAAGTCAATCATAATACATGATGCACATGTACACAAAACACAGCTTGCCGTAAAAACTCGACAGCAGGGAAGCGTCTTCTCTTGAAGAGTTGTTTCCTCACTGGCAGGGAGAGAGATCATAATTAAAGGTGAATGTAAACATCGCCTGCTGATTGCTGTGTGCAGGTCTGAGCCCGACGGAGCTGCCGTTCGACTGTCTGGAGCGCAGCAGC
C/T GGATGCTCAGCGCCACCTACAGCACAGATAAAGCGGTGGTGAAGACGTGGAGGCACCTGGCGGAGAGCTTCGGGCTGAAGAGAGACGAGATCGGCGGCATGACGGACGGGATGCAGCTGTTCGACCGCATCAGCACCGCTGGATACAGCATCCCTGACCTGCTGGCGCGCCTGCTGCAGATCGAGCGGCTGGACGCGGTGGAGACGCTCTGCTGCGACATCCTGAGCGGAACACAGAACTGCACTAATCCGCCCCTGAGCTCCCGCTGCGCCAGCGTCTGAACACCAGCACTGGCAGATACACTAGAGGATGCAAACCGTGACCGGCTGCGTCTGCCTGCCTTATCCTGATTCCCTAGACACTCCAAGTGCAGAGCGCACCCGAGCGCGAAACTAAAGACAACAGGCCACTTTTAAAGGGGGCCTAATATGCAGAAATCACTTTTATACGGAGCTGAGTGTGTCAGCGGTGTGTGAGTCTCTCCAGCAGACGCTCAACAG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| edart0621/t0621 (TL) | Homozygous | Unknown | Fig. 1  from Harris et al., 2008 | ||
| edart0621/+; edarte370f/+ | Complex | Fig. 1 from Harris et al., 2008 |
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Supplemental Information
- Genotyping protocol
- None
- Richardson, R., Metzger, M., Knyphausen, P., Ramezani, T., Slanchev, K., Kraus, C., Schmelzer, E., Hammerschmidt, M. (2016) Re-epithelialization of cutaneous wounds in adult zebrafish uses a combination of mechanisms at play during wound closure in embryonic and adult mammals. Development (Cambridge, England). 143(12):2077-88
- Harris, M.P., Rohner, N., Schwarz, H., Perathoner, S., Konstantinidis, P., and Nüsslein-Volhard, C. (2008) Zebrafish eda and edar mutants reveal conserved and ancestral roles of ectodysplasin signaling in vertebrates. PLoS Genetics. 4(10):e1000206
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