Genomic Feature

sa11

ID
ZDB-ALT-070921-1
Name
sa11
Synonyms
  • sa0011 (1)
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Stemple Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 17
Variants
Variant Type
Point Mutation
Variant Location
Chr 17: 30845986 (GRCz11) (1) Details
Nucleotide change
T/A
Variant Notes
This allele has a single T>A base pair change in exon 3 resulting in an  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
T>A in Exon 3 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
GTAAAAAAGCAAACAAATAAAAAAAAAATAAATAAAGTGAGATGAACGATATTCTGAATAATGTTGGGAAAAGGGTCATTGACATCCATGGTAGCAACGACAATAAATACGATAGAAGTCAATTGATGCCCCCCAACCCTACAAGAATCTTCAGCATATGCATTTTTGTGTTCAACTGAAAATAGAAACTCAAGCTGGCTTGGAACAAGCAAAGGATGAGAGAATTAAAATATTTTGGGTGAAATATCCCTTTAATTACAATAAGGTATTTCACTAAAATGTTGAATTGCATGTTAAACTAATCATATTTTGTAGCATAAATCAATATTGTAATAATATTTACAATAACCTGCCTAGTCCAAACTATAAAATACATTGATCTTTTTTTCATGCAATTTTCACAATCTCTATTTTCAAAACAAAACAAAACAAACTTAATCATGTTCCCTGTTGTTTTAGTGTACCTGGGGACTGGACATTTCTTGGACGGGTTGGACCAT
T/A GGAAGAAGTTGAACTAACGTTTGCGCTGAAGCAGCAGAATGTTAGCAAGATGGAAGAGTTACTCAAACTAGTATCAGATCCAGATTCACATCAATATGGTATTAATATGCTTCTCAAATGCTGCAATTGAATCTATTCAGCCGAGTCATCAATTGATCGACTGAGTCATCAGATTTCCATTCCTGTTATATTTTTTAGGGAAGTATCTGAGTTTGGACGAAGTCGCTGCTCTTTCCAGACCTTCTCCGCTGACTGAAAAAGTGGTAGAGAATTGGCTTCGGAGTCATGGGGTCATGGACTGTCACACTATTATAACACGGGACTTCCTTCAGTGTGTCATGACTGTGGAGTAAGAACAATTTTAGTGAATTCTACACTATTCATGGCAGAAAAAATCACTTCACTGTAGATGAAGAAAGTAAAAAAATAATAGTTTTCAGATATTTTTTGAGATATTGGAGTGGGATTTAACTCATTTTATTTATCATAATTCAGAAAAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
tpp1sa11/sa11Homozygous♀+/- ♂+/-9 figures with image from 2 publicationsFig. 3 from Mahmood et al., 2013
tpp1sa11UnknownUnknown
tpp1hu3587/+; tpp1sa11/+ComplexFig. 2 from Mahmood et al., 2013
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 2 of 2
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