Genomic Feature
hi3662Tg
- ID
- ZDB-ALT-041001-6
- Name
- hi3662Tg
- Synonyms
-
- hi3662 (1)
- Affected Genomic Region
- Construct
- Type
- Allele caused by Transgenic insertion (1)
- Protocol
- DNA
- Lab of Origin
- Hopkins Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
| Comment | Citation |
|---|---|
| The construct was inserted on the minus strand of the genome. The gene in which ... | ZFIN Curated Data |
Variants
- Variant Type
- Transgenic Insertion
- Variant Location
- Chr 10: 36442764 - 36442765 (GRCz11) (1) Details
- Nucleotide change
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- Insertion in Exon 4 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
- None
- Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| uspl1hi3662Tg/hi3662Tg | Homozygous | Unknown | text only from Amsterdam et al., 2004 | ||
| uspl1hi3662Tg/hi3662Tg (AB/TU) | Homozygous | ♀+/- ♂+/- | 2 figures from Schulz et al., 2012 | 2 figures from Schulz et al., 2012 | |
| uspl1hi3662Tg/+ | Heterozygous | Unknown | Fig. 5 from Schulz et al., 2012 | ||
| uspl1hi3662Tg/+ (AB) | Heterozygous | Unknown | |||
| uspl1hi3662Tg/+ (AB/TU) | Heterozygous | Unknown | |||
| uspl1hi3662Tg | Unknown | Unknown | Fig. for (hi3662)  from Phenotype Annotation (1994-2006) |
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Supplemental Information
- Genotyping protocol
- None
- Schulz, S., Chachami, G., Kozaczkiewicz, L., Winter, U., Stankovic-Valentin, N., Haas, P., Hofmann, K., Urlaub, H., Ovaa, H., Wittbrodt, J., Meulmeester, E., and Melchior, F. (2012) Ubiquitin-specific protease-like 1 (USPL1) is a SUMO isopeptidase with essential, non-catalytic functions. EMBO reports. 13(10):930-938
- Amsterdam, A., Nissen, R.M., Sun, Z., Swindell, E., Farrington, S., and Hopkins, N. (2004) Identification of 315 genes essential for early zebrafish development. Proceedings of the National Academy of Sciences of the United States of America. 101(35):12792-12797
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