Genomic Feature
hi3378Tg
- ID
- ZDB-ALT-040826-20
- Name
- hi3378Tg
- Synonyms
-
- hi3378 (1)
- Affected Genomic Region
- Construct
- Type
- Allele caused by Transgenic insertion (1)
- Protocol
- DNA
- Lab of Origin
- Hopkins Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
| Comment | Citation |
|---|---|
| The construct was inserted on the plus strand of the genome. The gene in which ... | ZFIN Curated Data |
Variants
- Variant Type
- Transgenic Insertion
- Variant Location
- Chr 6: 34860353 - 34860354 (GRCz11) (1) Details
- Nucleotide change
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- Insertion in Intron 1 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
- None
- Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| slc35d1ahi3378Tg/hi3378Tg | Homozygous | Unknown | text only from Amsterdam et al., 2004 | ||
| slc35d1ahi3378Tg/+ (AB) | Heterozygous | Unknown | |||
| slc35d1ahi3378Tg/+ (AB/TU) | Heterozygous | Unknown | |||
| slc35d1ahi3378Tg | Unknown | Unknown | Fig. for (hi3378)  from Phenotype Annotation (1994-2006) |
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Supplemental Information
- Genotyping protocol
- hi3378tg.pdf
- Nissen, R.M., Amsterdam, A., and Hopkins, N. (2006) A zebrafish screen for craniofacial mutants identifies wdr68 as a highly conserved gene required for Endothelin-1 expression. BMC Developmental Biology. 6:28
- Willer, G.B., Lee, V.M., Gregg, R.G., and Link, B.A. (2005) Analysis of the zebrafish perplexed mutation reveals tissue specific roles for de novo pyrimidine synthesis during development. Genetics. 170(4):1827-1837
- Amsterdam, A., Nissen, R.M., Sun, Z., Swindell, E., Farrington, S., and Hopkins, N. (2004) Identification of 315 genes essential for early zebrafish development. Proceedings of the National Academy of Sciences of the United States of America. 101(35):12792-12797
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