Genomic Feature
hi1364bTg
- ID
- ZDB-ALT-040217-8
- Name
- hi1364bTg
- Synonyms
-
- hi1364b (1)
- Affected Genomic Region
- Construct
- Type
- Allele caused by Transgenic insertion
- Protocol
- DNA
- Lab of Origin
- Hopkins Lab
- Current Source
- Other Pages
Notes
| Comment | Citation |
|---|---|
| The construct was inserted on the minus strand of the genome. The gene in which ... | ZFIN Curated Data |
Variants
- Variant Type
- Transgenic Insertion
- Variant Location
- Chr 3: 40290013 - 40290014 (GRCz11) (1) Details
- Nucleotide change
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- Insertion in Intron 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
- None
- Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| cpsf4hi1364bTg/hi1364bTg | Homozygous | ♀+/- ♂+/- | text only from Amsterdam et al., 2004 | ||
| cpsf4hi1364bTg/+ | Heterozygous | Unknown | |||
| cpsf4hi1364bTg | Unknown | Unknown | Fig. for (hi1364b) from Phenotype Annotation (1994-2006) |
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Supplemental Information
- Genotyping protocol
- None
- Zhang, G., Hoersch, S., Amsterdam, A., Whittaker, C.A., Beert, E., Catchen, J.M., Farrington, S., Postlethwait, J.H., Legius, E., Hopkins, N., and Lees, J.A. (2013) Comparative oncogenomic analysis of copy number alterations in human and zebrafish tumors enables cancer driver discovery. PLoS Genetics. 9(8):e1003734
- Gross, J.M., Perkins, B.D., Amsterdam, A., Egana, A., Darland, T., Matsui, J.I., Sciascia, S., Hopkins, N., and Dowling, J.E. (2005) Identification of Zebrafish Insertional Mutants with Defects in Visual System Development and Function. Genetics. 170(1):245-261
- Amsterdam, A., Nissen, R.M., Sun, Z., Swindell, E., Farrington, S., and Hopkins, N. (2004) Identification of 315 genes essential for early zebrafish development. Proceedings of the National Academy of Sciences of the United States of America. 101(35):12792-12797
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