Genomic Feature

em1

ID
ZDB-ALT-030617-2
Name
em1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
spontaneous 
Lab of Origin
Fritz Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 12: 43664495 - 43664497 (GRCz11) (1) Details
Nucleotide change
GCT/C
Variant Notes
A two-base deletion produces a frameshift in codon 41 and results in a  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted / 3 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TCATCCTCATCCCGTGCAACTTTCTTAAAGCAGTCGTTTAATGACAGGTTGTGTCTTATAGAGTTCTGCCAGCCGGCTTTACTTTTCTTGTAAAAGGGAAAGTTGTCAGCCACGTACTGATAAATCTGACTGAGCGTCAGTTTCTTATCCTGCGCGTTCTGGATAGCCATCGCAATCAGCGCCGAGTACGAGTACGGCGGTCTGACCATCTTGAAAAGTTCTTGCTGACTTGATATGGAGAGCCAGCCCAAATCCGCGCTTCCAAAGCCGGTAGGAGGAGGGAGAAACTGCCGCTGGTTGGATCCAAATCCCGACTGGATATAAGAGCCTCCGTTTGGGCTTGAGAGGTACGGGGTGGAGGTGATGCCCGGGCTGTTCATCCACAGGTAAGGGTTGGTGCTCGGCGAGCTGTACTCGCCGAGCCCGTAGCTGGAGGGATGCGCAGGCGGCCTCTGGTGGTGGTGATGGTGGTGATGATGGTGCAGGTTCTGCTGGTACAT
GCT/C GAAGTTGGAGTCGCAGTACACGGTCATGTCCAGGATGTCCTGCTGCTGAAGGGGACTGGTCTGCTGGCTCGACGGCTGCTGCCCAAACGCGTTCATAATCCGCTCTCCCTCCAGAAACATGGAGTTTCTCCGATCTGACCTGCTGAGTGTGCTCGTCTCTGAGGGGTTTCTCAAGGAGAGTGTCCGGGTGCGCTTCAGGGGAGGGTTATTTAACCTGTCCGGGGCGCATGCAGTGAATGGACTCATGTTGACTACTCCTCCCACTGTCACACTTCTTCTCAATTAACTTCATCCAATATGCATCAATCTGGCGTCGAGATCATTCACGTGATAAGCTTGCCGAACAAAGACTGTTTAAGCGCTAAAAAGGGTGGACACGTCTAAAAAATGGAAGATAGTTACACTGTAAAAAAAATAAAAAATCTTAAAATAAGTTTATACGAAGTCTCACTTTTTTTGTTAAACAAGCTGTTCTAAAGCGATAGTTCACCCTCAAGTGT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations