ZFIN Publication: Wang et al., 2009: Genes / Markers

Wang et al., 2009 - Phylogenetic Analysis of Zebrafish Basic Helix-Loop-Helix Transcription Factors. Journal of molecular evolution 68(6):629-640 Full text @ J. Mol. Evol.

126 Genes / Markers
Marker Type	Symbol	Name
Gene	ahr1a	aryl hydrocarbon receptor 1a
Gene	ahr1b	aryl hydrocarbon receptor 1b
Gene	ahr2	aryl hydrocarbon receptor 2
Gene	ahrrb	aryl-hydrocarbon receptor repressor b
Gene	arnt	aryl hydrocarbon receptor nuclear translocator
Gene	arnt2	aryl-hydrocarbon receptor nuclear translocator 2
Gene	ascl1a	achaete-scute family bHLH transcription factor 1a
Gene	ascl1b	achaete-scute family bHLH transcription factor 1b
Gene	atoh1a	atonal bHLH transcription factor 1a
Gene	atoh1b	atonal bHLH transcription factor 1b
Gene	atoh1c	atonal bHLH transcription factor 1c
Gene	atoh7	atonal bHLH transcription factor 7
Gene	atoh8	atonal bHLH transcription factor 8
Gene	bhlha15	basic helix-loop-helix family, member a15
Gene	bhlha9	basic helix-loop-helix family, member a9
Gene	bhlha9l1	basic helix-loop-helix family, member a9, like 1
Gene	bhlhe22	basic helix-loop-helix family, member e22
Gene	bhlhe23	basic helix-loop-helix family, member e23
Gene	bhlhe40	basic helix-loop-helix family, member e40
Gene	bhlhe41	basic helix-loop-helix family, member e41
Gene	bmal1a	basic helix-loop-helix ARNT like 1a
Gene	bmal2	basic helix-loop-helix ARNT like 2
Gene	clocka	clock circadian regulator a
Gene	clockb	clock circadian regulator b
Gene	ebf1b	EBF transcription factor 1b
Gene	ebf2	EBF transcription factor 2
Gene	ebf3a	EBF transcription factor 3a
Gene	ebf4	EBF transcription factor 4
Gene	epas1a	endothelial PAS domain protein 1a
Gene	epas1b	endothelial PAS domain protein 1b
Gene	ferd3l	Fer3-like bHLH transcription factor
Gene	figla	folliculogenesis specific bHLH transcription factor
Gene	hand2	heart and neural crest derivatives expressed 2
Gene	helt	helt bHLH transcription factor
Gene	her1	hairy-related 1
Gene	her12	hairy-related 12
Gene	her2	hairy-related 2
Gene	her4.1	hairy-related 4, tandem duplicate 1
Gene	her4.2	hairy-related 4, tandem duplicate 2
Gene	her6	hairy-related 6
Gene	her8.2	hairy-related 8.2
Gene	her9	hairy-related 9
Gene	hes2.1	hes family bHLH transcription factor 2, tandem duplicate 1
Gene	hes2.2	hes family bHLH transcription factor 2, tandem duplicate 2
Gene	hey1	hes-related family bHLH transcription factor with YRPW motif 1
Gene	hey2	hes-related family bHLH transcription factor with YRPW motif 2
Gene	heyl	hes related family bHLH transcription factor with YRPW motif like
Gene	hif1aa	hypoxia inducible factor 1 subunit alpha a
Gene	hif1ab	hypoxia inducible factor 1 subunit alpha b
Gene	hif1al	hypoxia inducible factor 1 subunit alpha, like
Gene	hif1al2	hypoxia inducible factor 1 subunit alpha, like 2
Gene	id1	inhibitor of DNA binding 1, HLH protein
Gene	id2a	inhibitor of DNA binding 2a
Gene	id2b	inhibitor of DNA binding 2b
Gene	id3	inhibitor of DNA binding 3
Gene	id4	inhibitor of DNA binding 4
Gene	lyl1	LYL1 basic helix-loop-helix family member
Gene	max	myc associated factor X
Gene	mespaa	mesoderm posterior aa
Gene	mespab	mesoderm posterior ab
Gene	mitfa	melanocyte inducing transcription factor a
Gene	mlx	MAX dimerization protein MLX
Gene	mlxip	MLX interacting protein
Gene	mnta	MAX network transcriptional repressor a
Gene	mntb	MAX network transcriptional repressor b
Gene	msc	musculin (activated B-cell factor-1)
Gene	msgn1	mesogenin 1
Gene	mxd1	MAX dimerization protein 1
Gene	mxd3	MAX dimerization protein 3
Gene	mxd4	MAX dimerization protein 4
Gene	mxi1	max interactor 1, dimerization protein
Gene	myca	MYC proto-oncogene, bHLH transcription factor a
Gene	mycb	MYC proto-oncogene, bHLH transcription factor b
Gene	mych	myelocytomatosis oncogene homolog
Gene	mycla	MYCL proto-oncogene, bHLH transcription factor a
Gene	myclb	MYCL proto-oncogene, bHLH transcription factor b
Gene	mycn	MYCN proto-oncogene, bHLH transcription factor
Gene	myf5	myogenic factor 5
Gene	myf6	myogenic factor 6
Gene	myod1	myogenic differentiation 1
Gene	myog	myogenin
Gene	ncoa1	nuclear receptor coactivator 1
Gene	ncoa2	nuclear receptor coactivator 2
Gene	ncoa3	nuclear receptor coactivator 3
Gene	neurod1	neuronal differentiation 1
Gene	neurod2	neuronal differentiation 2
Gene	neurod4	neuronal differentiation 4
Gene	neurod6a	neuronal differentiation 6a
Gene	neurod6b	neuronal differentiation 6b
Gene	neurog1	neurogenin 1
Gene	neurog3	neurogenin 3
Gene	nhlh2	nescient helix loop helix 2
Gene	npas2	neuronal PAS domain protein 2
Gene	npas3	neuronal PAS domain protein 3
Gene	olig1	oligodendrocyte transcription factor 1
Gene	olig2	oligodendrocyte lineage transcription factor 2
Gene	olig3	oligodendrocyte transcription factor 3
Gene	olig4	oligodendrocyte transcription factor 4
Gene	ptf1a	pancreas associated transcription factor 1a
Gene	scxa	scleraxis bHLH transcription factor a
Gene	scxb	scleraxis bHLH transcription factor b
Gene	si:ch211-246m6.4	si:ch211-246m6.4
Gene	si:dkey-34f9.3	si:dkey-34f9.3
Gene	sim1b	SIM bHLH transcription factor 1b
Gene	sim2	SIM bHLH transcription factor 2
Gene	srebf1	sterol regulatory element binding transcription factor 1
Gene	srebf2	sterol regulatory element binding transcription factor 2
Gene	tal1	T-cell acute lymphocytic leukemia 1
Gene	tal2	T-cell acute lymphocytic leukemia 2
Gene	tcf12	transcription factor 12
Gene	tcf15	transcription factor 15
Gene	tcf21	transcription factor 21
Gene	tcf23	transcription factor 23
Gene	tcf24	transcription factor 24
Gene	tcf3a	transcription factor 3a
Gene	tcf3b	transcription factor 3b
Gene	tfap4	transcription factor AP-4 (activating enhancer binding protein 4)
Gene	tfe3a	transcription factor binding to IGHM enhancer 3a
Gene	tfe3b	transcription factor binding to IGHM enhancer 3b
Gene	tfeb	transcription factor EB
Gene	tfec	transcription factor EC
Gene	twist1a	twist family bHLH transcription factor 1a
Gene	twist1b	twist family bHLH transcription factor 1b
Gene	twist3	twist3
Gene	usf1	upstream transcription factor 1
Gene	usf2	upstream transcription factor 2, c-fos interacting