ZFIN Sequences for Gene: bdnf

ZFIN ID: ZDB-GENE-000412-1

ZFIN ID: ZDB-GENE-000412-1

SEQUENCE INFORMATION

Gene Name:	brain-derived neurotrophic factor
Gene Symbol:	bdnf

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001308649 (1)	2334 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001308648 (1)	1964 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_131595 (1)	1904 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009303234 (1)	4445 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01002286 (1)	2694 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC058301 (1)	1904 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC066468 (1)	1503 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC066399 (1)	1461 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:U42489 (1)	1180 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:FJ915060 (1)	755 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:AL935207 (2)	146351 nt	Select Tool MegaBLAST Ensembl
	GenBank:CT573457	75290 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU459028 (2)	4893 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:A0A8M1P735 (1)	278 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q6NZ01 (1)	270 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001295577 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001295578 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_571670 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009301509 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAD00016 (1)	270 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH58301 (1)	270 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH66399 (1)	270 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH66468 (1)	270 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:ACR83577 (1)	232 aa	Select Tool ZFIN BLAST NCBI BLAST

bdnf CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-387L4 (1)	Genomic	GenBank:CU459028	4893	Select Tool ZFIN BLAST NCBI BLAST Ensembl
[BAC] CH211-214A19 (1)	Genomic	GenBank:CT573457	75290	Select Tool MegaBLAST Ensembl
[BAC] CH211-251J8 (1)	Genomic	GenBank:AL935207	146351	Select Tool MegaBLAST Ensembl

bdnf ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:65746 (2)	RNA	GenBank:BC058301	1904	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:76834 (2)	RNA	GenBank:BC066399	1461	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAH66399	270	Select Tool ZFIN BLAST NCBI BLAST
[CDNA] MGC:76835 (1)	RNA	GenBank:BC066468	1503	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT