ZFIN Sequences for Gene: CH211-167J9

ZFIN ID: ZDB-BAC-070608-123

ZFIN ID: ZDB-BAC-070608-123

SEQUENCE INFORMATION

BAC Name:	CH211-167J9

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
Genomic	GenBank:CR848814 (1)	79851 bp	Select Tool MegaBLAST Ensembl

CH211-167J9 CONTAINS

Marker	Type	Accession #	Length (bp/aa)	Analysis
[GENE] bbc3 (79)	RNA	RefSeq:XM_009291674		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001045472	3791	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01002206		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:BC139508	3791	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:DQ860151	894	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:CR848814	79851	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q0GKC9	181	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:F1QKA1	181	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_009289949		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001038937		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:ABI18122	181	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAI39509	181	Select Tool ZFIN BLAST NCBI BLAST
	Sequence Clusters	UniGene:26003
[GENE] ift20 (13)	RNA	RefSeq:XM_005157577		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001001833	1137	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01013143		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:BC081508	1137	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AY600453	491	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC165149	466	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	UniProtKB:Q66I67	132	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:B2GRJ4	132	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A0R4I9H0	132	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005157634		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001001833		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:Q66I67	132	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAT27466	132	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAI65149	132	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAH81508	132	Select Tool ZFIN BLAST NCBI BLAST
	Sequence Clusters	UniGene:31003
[GENE] rad1 (6)	RNA	RefSeq:NM_200898	1624	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01032136		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:BC064305	1624	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC049464	1612	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	UniProtKB:Q7ZWD7	279	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:Q6P2T4	279	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_957192		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAH64305	279	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAH49464	279	Select Tool ZFIN BLAST NCBI BLAST
	Sequence Clusters	UniGene:77004
[GENE] si:ch211-167j9.4 (2)	Polypeptide	UniProtKB:X1WEW9	569	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
[GENE] si:ch211-167j9.5 (2)	Polypeptide	UniProtKB:X1WH91	253	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
[GENE] tmem97 (6)	RNA	RefSeq:NM_001326398		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01010395		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:EH551107	971	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC151870	932	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC095265	873	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:EH559728	849	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	UniProtKB:F1QDW6	261	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A7MBQ3	207	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:Q503M5	189	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001313327		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAI51871	207	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAH95265	189	Select Tool ZFIN BLAST NCBI BLAST
	Sequence Clusters	UniGene:88240
[GENE] usp32 (8)	RNA	RefSeq:XM_681144		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_009291747		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_005157606		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQQ01024396		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:DN894051	717	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AW059457	585	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AW058958	475	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:CU570780	68447	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:E7FCR5	1585	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A2R8QUB8	1561	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_686236		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_009290022		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005157663		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Sequence Clusters	UniGene:80113
	Sequence Clusters	UniGene:134125