Raj, B., Wagner, D.E., McKenna, A., Pandey, S., Klein, A.M., Shendure, J., Gagnon, J.A., Schier, A.F. (2018) Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain. Nature Biotechnology. 36(5):442-450

Takasugi, P.R., Wang, S., Truong, K.T., Drage, E.P., Kanishka, S.N., Higbee, M.A., Bamidele, N., Ojelabi, O., Sontheimer, E.J., Gagnon, J.A. (2021) Orthogonal CRISPR-Cas tools for genome editing, inhibition, and CRISPR recording in zebrafish embryos. Genetics. 220(1):

Rubin, S.A., Baron, C.S., Pessoa Rodrigues, C., Duran, M., Corbin, A.F., Yang, S.P., Trapnell, C., Zon, L.I. (2022) Single-cell analyses reveal early thymic progenitors and pre-B cells in zebrafish. The Journal of experimental medicine. 219(9)

Teets, E.M., Gregory, C., Shaffer, J., Blachly, J.S., Blaser, B.W. (2020) Quantifying Hematopoietic Stem Cell Clonal Diversity by Selecting Informative Amplicon Barcodes. Scientific Reports. 10:2153