Appelbaum, L., and Gothilf, Y. (2006) Mechanism of pineal-specific gene expression: The role of E-box and photoreceptor conserved elements. Molecular and Cellular Endocrinology. 252(1-2):27-33

Bellingham, J., Whitmore, D., Philp, A.R., Wells, D.J., and Foster, R.G. (2002) Zebrafish melanopsin: isolation, tissue localisation and phylogenetic position. Brain research. Molecular brain research. 107(2):128-136

Cau, E., Ronsin, B., Bessière, L., Blader, P. (2019) A Notch-mediated, temporal asymmetry in BMP pathway activation promotes photoreceptor subtype diversification. PLoS Biology. 17:e2006250

Davies, W.I., Tamai, T.K., Zheng, L., Fu, J.K., Rihel, J., Foster, R.G., Whitmore, D., Hankins, M.W. (2015) An extended family of novel vertebrate photopigments is widely expressed and displays a diversity of function. Genome research. 25(11):1666-79

Falcon, J., Gothilf, Y., Coon, S.L., Boeuf, G., and Klein, D.C. (2003) Genetic, temporal and developmental differences between melatonin rhythm generating systems in the teleost fish pineal organ and retina. Journal of neuroendocrinology. 15(4):378-382

Kojima, D., Dowling, J.E., and Fukada, Y. (2008) Probing Pineal-specific Gene Expression with Transgenic Zebrafish. Photochemistry and photobiology. 84(4):1011-1015

Lagman, D., Ocampo Daza, D., Widmark, J., Abalo, X.M., Sundström, G., and Larhammar, D. (2013) The vertebrate ancestral repertoire of visual opsins, transducin alpha subunits and oxytocin/vasopressin receptors was established by duplication of their shared genomic region in the two rounds of early vertebrate genome duplications. BMC Evolutionary Biology. 13:238

Lu, P.N., Lund, C., Khuansuwan, S., Schumann, A., Harney-Tolo, M., Gamse, J.T., and Liang, J.O. (2013) Failure in closure of the anterior neural tube causes left isomerization of the zebrafish epithalamus. Developmental Biology. 374(2):333-344

Mano, H., Kojima, D., and Fukada, Y. (1999) Exo-rhodopsin: a novel rhodopsin expressed in the zebrafish pineal gland. Mol. Brain Res.. 73(1-2):110-118

Morrow, J.M., Lazic, S., Fox, M.D., Kuo, C., Schott, R.K., Gutierrez, E.A., Santini, F., Tropepe, V., Chang, B.S. (2017) A second visual rhodopsin gene, rh1-2, is expressed in zebrafish photoreceptors and found in other ray-finned fishes. The Journal of experimental biology. 220(Pt 2):294-303

Pierce, L.X., Harrison, D., and Liang, J.O. (2007) The Time Reaper 5-Channel Automatic Liquid Dispenser: A New Tool for Studying Zebrafish Development. Zebrafish. 4(3):169-177

Schredelseker, T., Driever, W. (2018) Bsx controls pineal complex development. Development (Cambridge, England). 145(13):

Shi, W.J., Jiang, Y.X., Ma, D.D., Huang, G.Y., Xie, L., Chen, H.X., Huang, M.Z., Ying, G.G. (2019) Dydrogesterone affects the transcription of genes in visual cycle and circadian rhythm network in the eye of zebrafish. Ecotoxicology and environmental safety. 183:109556

Sukeena, J.M., Galicia, C.A., Wilson, J.D., McGinn, T., Boughman, J.W., Robison, B.D., Postlethwait, J.H., Braasch, I., Stenkamp, D.L., Fuerst, P.G. (2016) Characterization and Evolution of the Spotted Gar Retina. Journal of experimental zoology. Part B, Molecular and developmental evolution. 326(7):403-421

Toyama, R., Chen, X., Jhawar, N., Aamar, E., Epstein, J., Reany, N., Alon, S., Gothilf, Y., Klein, D.C., and Dawid, I.B. (2009) Transcriptome analysis of the zebrafish pineal gland. Developmental Dynamics : an official publication of the American Association of Anatomists. 238(7):1813-1826

Ziv, L., Tovin, A., Strasser, D., and Gothilf, Y. (2007) Spectral sensitivity of melatonin suppression in the zebrafish pineal gland. Experimental Eye Research. 84(1):92-99

Carstensen, M.B., Medvetzky, A., Weinberger, A., Driever, W., Gothilf, Y., Rath, M.F. (2022) Genetic ablation of the Bsx homeodomain transcription factor in zebrafish: Impact on mature pineal gland morphology and circadian behavior. Journal of pineal research. 72(4):e12795

Shi, W.J., Huang, G.Y., Jiang, Y.X., Ma, D.D., Chen, H.X., Huang, M.Z., Hou, L.P., Xie, L., Ying, G.G. (2020) Medroxyprogesterone acetate affects eye growth and the transcription of associated genes in zebrafish. Ecotoxicology and environmental safety. 193:110371

Mano, H., Asaoka, Y., Kojima, D., Fukada, Y. (2019) Brain-specific homeobox Bsx specifies identity of pineal gland between serially homologous photoreceptive organs in zebrafish. Communications biology. 2:364

Schredelseker, T., Driever, W. (2018) Bsx controls pineal complex development. Development (Cambridge, England). 145(13):

Sukeena, J.M., Galicia, C.A., Wilson, J.D., McGinn, T., Boughman, J.W., Robison, B.D., Postlethwait, J.H., Braasch, I., Stenkamp, D.L., Fuerst, P.G. (2016) Characterization and Evolution of the Spotted Gar Retina. Journal of experimental zoology. Part B, Molecular and developmental evolution. 326(7):403-421

Kokel, D., Dunn, T.W., Ahrens, M.B., Alshut, R., Cheung, C.Y., Saint-Amant, L., Bruni, G., Mateus, R., van Ham, T.J., Shiraki, T., Fukada, Y., Kojima, D., Yeh, J.R., Mikut, R., von Lintig, J., Engert, F., and Peterson, R.T. (2013) Identification of Nonvisual Photomotor Response Cells in the Vertebrate Hindbrain. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33(9):3834-3843

Lu, P.N., Lund, C., Khuansuwan, S., Schumann, A., Harney-Tolo, M., Gamse, J.T., and Liang, J.O. (2013) Failure in closure of the anterior neural tube causes left isomerization of the zebrafish epithalamus. Developmental Biology. 374(2):333-344

Morrow, J.M., Lazic, S., and Chang, B.S. (2011) A novel rhodopsin-like gene expressed in zebrafish retina. Visual neuroscience. 28(4):325-35

Tarttelin, E.E., Fransen, M.P., Edwards, P.C., Hankins, M.W., Schertler, G.F., Vogel, R., Lucas, R.J., and Bellingham, J. (2011) Adaptation of pineal expressed teleost exo-rod opsin to non-image forming photoreception through enhanced Meta II decay. Cellular and molecular life sciences : CMLS. 68(22):3713-23

Kojima, D., Dowling, J.E., and Fukada, Y. (2008) Probing Pineal-specific Gene Expression with Transgenic Zebrafish. Photochemistry and photobiology. 84(4):1011-1015

Chen, H., Leung, T., Giger, K.E., Stauffer, A.M., Humbert, J.E., Sinha, S., Horstick, E.J., Hansen, C.A., and Robishaw, J.D. (2007) Expression of the G protein gammaT1 subunit during zebrafish development. Gene expression patterns : GEP. 7(5):574-583

Ziv, L., Tovin, A., Strasser, D., and Gothilf, Y. (2007) Spectral sensitivity of melatonin suppression in the zebrafish pineal gland. Experimental Eye Research. 84(1):92-99

Vuilleumier, R., Besseau, L., Boeuf, G., Piparelli, A., Gothilf, Y., Gehring, W.G., Klein, D.C., and Falcon, J. (2006) Starting the Zebrafish Pineal Circadian Clock with a Single Photic Transition. Endocrinology. 147(5):2273-2279

Asaoka, Y., Mano, H., Kojima, D., and Fukada, Y. (2002) Pineal expression-promoting element (PIPE), a cis-acting element, directs pineal-specific gene expression in zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 99:15456-15461

Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903

Mano, H., Kojima, D., and Fukada, Y. (1999) Exo-rhodopsin: a novel rhodopsin expressed in the zebrafish pineal gland. Mol. Brain Res.. 73(1-2):110-118