ZFIN Publication ID	PubMed ID	Authors	Title	Journal	Year	Volume	Pages
ZDB-PUB-000126-10	10637509	Brown, L.A., Yang, S.H., Hair, A., Galanis, A., and Sharrocks, A.D.	Molecular characterization of a zebrafish TCF ETS-domain transcription factor	Oncogene	1999	18(56)	7985-7993
ZDB-PUB-000209-1		Saito, T., Hascilowicz, T., Ohkido, I., Kikuchi, Y., Okamoto, H., Hayashi, S., Murakami, Y., and Matsufuji, S.	Two zebrafish (Danio rerio) antizymes with different expression and activities	The Biochemical journal	2000	345(1)	99-106
ZDB-PUB-001220-4	11120825	Sültmann, H., Sato, A., Murray, B.W., Takezaki, N., Geisler, R., Rauch, G.J., and Klein, J.	Conservation of Mhc class III region synteny between zebrafish and human as determined by radiation hybrid mapping	Journal of immunology (Baltimore, Md. : 1950)	2000	165(12)	6984-6993
ZDB-PUB-010117-3	11091070	Goutel, C., Kishimoto, Y., Schulte-Merker, S., and Rosa, F.	The ventralizing activity of Radar, a maternally expressed bone morphogenetic protein, reveals complex bone morphogenetic protein interactions controlling dorso-ventral patterning in zebrafish	Mechanisms of Development	2000	99(1-2)	15-27
ZDB-PUB-010306-5	11222140	Bauer, H., Lele, Z., Rauch, G.J., Geisler, R., and Hammerschmidt, M.	The type I serine/threonine kinase receptor Alk8/Lost-a-fin is required for Bmp2b/7 signal transduction during dorsoventral patterning of the zebrafish embryo	Development (Cambridge, England)	2001	128(6)	849-858
ZDB-PUB-020429-6	11963654	Liu, Y.-W. and Chan, W.-K.	Thyroid hormones are important for embryonic to larval transitory phase in zebrafish	Differentiation; research in biological diversity	2002	70(1)	36-45
ZDB-PUB-020521-9	12006978	Golling, G., Amsterdam, A., Sun, Z., Antonelli, M., Maldonado, E., Chen, W., Burgess, S., Haldi, M., Artzt, K., Farrington, S., Lin, S.Y., Nissen, R.M., and Hopkins, N.	Insertional mutagenesis in zebrafish rapidly identifies genes essential for early vertebrate development	Nature Genetics	2002	31(2)	135-140
ZDB-PUB-021016-11	12376102	Kramer, C., Mayr, T., Nowak, M., Schumacher, J., Runke, G., Bauer, H., Wagner, D., Schmid, B., Imai, Y., Talbot, W., Mullins, M., and Hammerschmidt, M.	Maternally supplied smad5 is required for ventral specification in zebrafish embryos prior to zygotic bmp signaling	Developmental Biology	2002	250(2)	263-279
ZDB-PUB-030304-3	12606280	Herzog, W., Zeng, X., Lele, Z., Sonntag, C., Ting, J.W., Chang, C.Y., and Hammerschmidt, M.	Adenohypophysis formation in the zebrafish and its dependence on sonic hedgehog	Developmental Biology	2003	254(1)	36-49
ZDB-PUB-040217-2	12477932	Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences	Proceedings of the National Academy of Sciences of the United States of America	2002	99(26)	16899-903
ZDB-PUB-040623-3	15207702	Takagi, Y., Kobayashi, M., Li, L., Suzuki, T., Nishikawa, K, and Yamamoto, M.	MafT, a new member of the small Maf protein family in zebrafish	Biochemical and Biophysical Research Communications	2004	320(1)	62-69
ZDB-PUB-040625-11	15213236	Cheng, S., Shakespeare, T., Mui, R., White, T.W., and Valdimarsson, G.	Connexin48.5 is required for normal cardiovascular function and lens development in zebrafish embryos	The Journal of biological chemistry	2004	279(35)	36993-37003
ZDB-PUB-040708-1	15256591	Amsterdam, A., Nissen, R.M., Sun, Z., Swindell, E., Farrington, S., and Hopkins, N.	Identification of 315 genes essential for early zebrafish development	Proceedings of the National Academy of Sciences of the United States of America	2004	101(35)	12792-12797
ZDB-PUB-041022-7	15497138	Joseph, E.M.	Zebrafish IRX1b in the embryonic cardiac ventricle	Developmental Dynamics : an official publication of the American Association of Anatomists	2004	231(4)	720-726
ZDB-PUB-041104-5	15520368	Song, H.D., Sun, X.J., Deng, M., Zhang, G.W., Zhou, Y., Wu, X.Y., Sheng, Y., Chen, Y., Ruan, Z., Jiang, C.L., Fan, H.Y., Zon, L.I., Kanki, J.P., Liu, T.X., Look, A.T., and Chen, Z.	Hematopoietic gene expression profile in zebrafish kidney marrow	Proceedings of the National Academy of Sciences of the United States of America	2004	101(46)	16240-16245
ZDB-PUB-050303-2	15737934	Gering, M., and Patient, R.	Hedgehog Signaling Is Required for Adult Blood Stem Cell Formation in Zebrafish Embryos	Developmental Cell	2005	8(3)	389-400
ZDB-PUB-050328-3	15790397	Huang, H., Zhang, B., Hartenstein, P.A., Chen, J.N., and Lin, S.	NXT2 is required for embryonic heart development in zebrafish	BMC Developmental Biology	2005	5(1)	7
ZDB-PUB-050328-5	15791595	Lai, S.L., Chang, C.N., Wang, P.J., and Lee, S.J.	Rho mediates cytokinesis and epiboly via ROCK in zebrafish	Molecular reproduction and development	2005	71(2)	186-196
ZDB-PUB-050727-13	16033799	Fong, S.H., Emelyanov, A., Teh, C., and Korzh, V.	Wnt signalling mediated by Tbx2b regulates cell migration during formation of the neural plate	Development (Cambridge, England)	2005	132(16)	3587-3596
ZDB-PUB-050803-7	16051172	Correa, R.G., Matsui, T., Tergaonkar, V., Rodriguez-Esteban, C., Izpisúa Belmonte, J.C., and Verma, I.M.	Zebrafish IkappaB Kinase 1 Negatively Regulates NF-kappaB Activity	Current biology : CB	2005	15(14)	1291-1295
ZDB-PUB-050818-11	16099879	Lin, H.F., Traver, D., Zhu, H., Dooley, K., Paw, B.H., Zon, L.I., and Handin, R.I.	Analysis of thrombocyte development in CD41-GFP transgenic zebrafish	Blood	2005	106(12)	3803-3810
ZDB-PUB-051031-4	16252281	Chong, S.W., Nguyen, T.T., Chu, L.T., Jiang, Y.J., Korzh, V.	Zebrafish id2 developmental expression pattern contains evolutionary conserved and species-specific characteristics	Developmental Dynamics : an official publication of the American Association of Anatomists	2005	234(4)	1055-1063
ZDB-PUB-051101-14	16256099	Miyake, A., Nakayama, Y., Konishi, M., and Itoh, N.	Fgf19 regulated by Hh signaling is required for zebrafish forebrain development	Developmental Biology	2005	288(1)	259-275
ZDB-PUB-051207-21	16322560	Chen, J., Ruan, H., Ng, S.M., Gao, C., Soo, H.M., Wu, W., Zhang, Z., Wen, Z., Lane, D.P., and Peng, J.	Loss of function of def selectively up-regulates {Delta}113p53 expression to arrest expansion growth of digestive organs in zebrafish	Genes & Development	2005	19(23)	2900-2911
ZDB-PUB-051214-9	16326146	Mao, L., and Shelden, E.A.	Developmentally regulated gene expression of the small heat shock protein Hsp27 in zebrafish embryos	Gene expression patterns : GEP	2006	6(2)	127-133
ZDB-PUB-060105-16	16379021	Vihtelic, T.S., Fadool, J.M., Gao, J., Thornton, K.A., Hyde, D.R., and Wistow, G.	Expressed sequence tag analysis of zebrafish eye tissues for NEIBank	Molecular Vision	2005	11	1083-1100
ZDB-PUB-060616-7	16728471	Goishi, K., Shimizu, A., Najarro, G., Watanabe, S., Rogers, R., Zon, L.I., and Klagsbrun, M.	{alpha}A-crystallin expression prevents {gamma}-crystallin insolubility and cataract formation in the zebrafish cloche mutant lens	Development (Cambridge, England)	2006	133(13)	2585-2593
ZDB-PUB-060816-6	16888647	Eimon, P.M., Kratz, E., Varfolomeev, E., Hymowitz, S.G., Stern, H., Zha, J., and Ashkenazi, A.	Delineation of the cell-extrinsic apoptosis pathway in the zebrafish	Cell death and differentiation	2006	13(10)	1619-1630
ZDB-PUB-060927-11	16999953	Covassin, L., Amigo, J.D., Suzuki, K., Teplyuk, V., Straubhaar, J., and Lawson, N.D.	Global analysis of hematopoietic and vascular endothelial gene expression by tissue specific microarray profiling in zebrafish	Developmental Biology	2006	299(2)	551-562
ZDB-PUB-061116-3	17090698	Morais, S., Knoll-Gellida, A., Andre, M., Barthe, C., and Babin, P.J.	Conserved expression of alternative splicing variants of peroxisomal acyl-CoA oxidase 1 in vertebrates and developmental and nutritional regulation in fish	Physiological Genomics	2007	28(3)	239-252
ZDB-PUB-070210-21	17239340	Pei, D.S., Sun, Y.H., Chen, S.P., Wang, Y.P., Hu, W., and Zhu, Z.Y.	Zebrafish GAPDH can be used as a reference gene for expression analysis in cross-subfamily cloned embryos	Analytical biochemistry	2007	363(2)	291-293
ZDB-PUB-070303-12	17299134	Craig, P.M., Wood, C.M., and McClelland, G.B.	Gill membrane remodeling with softwater acclimation in Zebrafish (Danio rerio)	Physiological Genomics	2007	30(1)	53-60
ZDB-PUB-070409-21	17409396	Nicoli, S., Ribatti, D., Cotelli, F., and Presta, M.	Mammalian tumor xenografts induce neovascularization in zebrafish embryos	Cancer research	2007	67(7)	2927-2931
ZDB-PUB-070424-4	17418841	Walpita, C.N., Van der Geyten, S., Rurangwa, E., and Darras, V.M.	The effect of 3,5,3'-triiodothyronine supplementation on zebrafish (Danio rerio) embryonic development and expression of iodothyronine deiodinases and thyroid hormone receptors	General and comparative endocrinology	2007	152(2-3)	206-214
ZDB-PUB-070513-24	17490614	O'Boyle, S., Bree, R.T., McLoughlin, S., Grealy, M., and Byrnes, L.	Identification of zygotic genes expressed at the midblastula transition in zebrafish	Biochemical and Biophysical Research Communications	2007	358(2)	462-468
ZDB-PUB-070513-25	17492136	Tang, R., Dodd, A., Lai, D., McNabb, W.C., and Love, D.R.	Validation of Zebrafish (Danio rerio) Reference Genes for Quantitative Real-time RT-PCR Normalization	Acta biochimica et biophysica Sinica	2007	39(5)	384-390
ZDB-PUB-070711-27	17606305	Martyniuk, C.J., Gerrie, E.R., Popesku, J.T., Ekker, M., and Trudeau, V.L.	Microarray analysis in the zebrafish (Danio rerio) liver and telencephalon after exposure to low concentration of 17alpha-ethinylestradiol	Aquatic toxicology (Amsterdam, Netherlands)	2007	84(1)	38-49
ZDB-PUB-070726-1	14666513	Yamakoshi, K., and Shimoda, N.	De novo DNA methylation at the CpG island of the zebrafish no tail gene	Genesis (New York, N.Y. : 2000)	2003	37(4)	195-202
ZDB-PUB-070726-8	17624603	Wang, N., Sun, Y.H., Liu, J., Wu, G., Su, J.G., Wang, Y.P., and Zhu, Z.Y.	Knock down of gfp and no tail expression in zebrafish embryo by in vivo-transcribed short hairpin RNA with T7 plasmid system	Journal of Biomedical Science	2007	14(6)	767-776
ZDB-PUB-070820-15	17701034	Beetz, S., Diekhoff, D., and Steiner, L.A.	Characterization of terminal deoxynucleotidyl transferase and polymerase mu in zebrafish	Immunogenetics	2007	59(9)	735-744
ZDB-PUB-070920-14	17855494	Craig, P.M., Wood, C.M., and McClelland, G.B.	Oxidative stress response and gene expression with acute copper exposure in zebrafish (Danio rerio)	American journal of physiology. Regulatory, integrative and comparative physiology	2007	293(5)	R1882-R1892
ZDB-PUB-071009-13	17919534	Webb, A.E., Sanderford, J., Frank, D., Talbot, W.S., Driever, W., and Kimelman, D.	Laminin alpha5 is essential for the formation of the zebrafish fins	Developmental Biology	2007	311(2)	369-382
ZDB-PUB-071016-14	17932252	Kobayashi, I., Saito, K., Moritomo, T., Araki, K., Takizawa, F., and Nakanishi, T.	Characterization and localization of side population (SP) cells in zebrafish kidney hematopoietic tissue	Blood	2008	111(3)	1131-1137
ZDB-PUB-071219-11	18074148	Macqueen, D.J., and Johnston, I.A.	Evolution of follistatin in teleosts revealed through phylogenetic, genomic and expression analyses	Development genes and evolution	2008	218(1)	1-14
ZDB-PUB-080209-1	18182494	Du, S.J., Li, H., Bian, Y., and Zhong, Y.	Heat-shock protein 90alpha1 is required for organized myofibril assembly in skeletal muscles of zebrafish embryos	Proceedings of the National Academy of Sciences of the United States of America	2008	105(2)	554-559
ZDB-PUB-080218-26	18214933	Kausch, U., Alberti, M., Haindl, S., Budczies, J., and Hock, B.	Biomarkers for exposure to estrogenic compounds: Gene expression analysis in zebrafish (Danio rerio)	Environmental toxicology	2008	23(1)	15-24
ZDB-PUB-080306-9	18287205	Yamaguchi, M., Fujimori-Tonou, N., Yoshimura, Y., Kishi, T., Okamoto, H., and Masai, I.	Mutation of DNA primase causes extensive apoptosis of retinal neurons through the activation of DNA damage checkpoint and tumor suppressor p53	Development (Cambridge, England)	2008	135(7)	1247-1257
ZDB-PUB-080515-4	18469222	Laue, K., Daujat, S., Crump, J.G., Plaster, N., Roehl, H.H., Tübingen 2000 Screen Consortium, Kimmel, C.B., Schneider, R., and Hammerschmidt, M.	The multidomain protein Brpf1 binds histones and is required for Hox gene expression and segmental identity	Development (Cambridge, England)	2008	135(11)	1935-1946
ZDB-PUB-080515-6	18469340	Skarie, J.M., and Link, B.A.	The Primary open-angle glaucoma gene WDR36 functions in ribosomal RNA processing and interacts with the p53 stress–response pathway	Human molecular genetics	2008	17(16)	2474-2485
ZDB-PUB-080714-11	18606866	Lee, S.J., Chan, T.H., Chen, T.C., Liao, B.K., Hwang, P.P., and Lee, H.	LPA1 is essential for lymphatic vessel development in zebrafish	FASEB journal : official publication of the Federation of American Societies for Experimental Biology	2008	22(10)	3706-3715
ZDB-PUB-080801-21	18654634	Dokmanovic-Chouinard, M., Chung, W.K., Chevre, J.C., Watson, E., Yonan, J., Wiegand, B., Bromberg, Y., Wakae, N., Wright, C.V., Overton, J., Ghosh, S., Sathe, G.M., Ammala, C.E., Brown, K.K., Ito, R., LeDuc, C., Solomon, K., Fischer, S.G., and Leibel, R.L.	Positional cloning of "Lisch-Like", a candidate modifier of susceptibility to type 2 diabetes in mice	PLoS Genetics	2008	4(7)	e1000137
ZDB-PUB-080924-2	18803863	Kolmakov, N.N., Kube, M., Reinhardt, R., and Canario, A.V.	Analysis of the goldfish Carassius auratus olfactory epithelium transcriptome reveals the presence of numerous non-olfactory GPCR and putative receptors for progestin pheromones	BMC Genomics	2008	9	429
ZDB-PUB-081022-9	18846223	Imamura, S., Uchiyama, J., Koshimizu, E., Hanai, J., Raftopoulou, C., Murphey, R.D., Bayliss, P.E., Imai, Y., Burns, C.E., Masutomi, K., Gagos, S., Zon, L.I., Roberts, T.M., and Kishi, S.	A non-canonical function of zebrafish telomerase reverse transcriptase is required for developmental hematopoiesis	PLoS One	2008	3(10)	e3364
ZDB-PUB-081110-7	18987288	Craig, P.M., Galus, M., Wood, C.M., and McClelland, G.B.	Dietary iron alters waterborne-copper induced gene expression in softwater acclimated zebrafish (Danio rerio)	American journal of physiology. Regulatory, integrative and comparative physiology	2009	296(2)	R362-R373
ZDB-PUB-081114-11	19000772	Tse, A.C., and Ge, W.	Differential regulation of betacellulin and heparin-binding EGF-like growth factor in cultured zebrafish ovarian follicle cells by EGF family ligands	Comparative biochemistry and physiology. Part A, Molecular & integrative physiology	2009	153(1)	13-17
ZDB-PUB-081121-19	19014500	McCurley, A.T., and Callard, G.V.	Characterization of housekeeping genes in zebrafish: male-female differences and effects of tissue type, developmental stage and chemical treatment	BMC Molecular Biology	2008	9	102
ZDB-PUB-081218-1	19063890	Lin, S.W., and Ge, W.	Differential regulation of gonadotropins (FSH and LH) and growth hormone (GH) by neuroendocrine, endocrine, and paracrine factors in the zebrafish—An in vitro approach	General and comparative endocrinology	2009	160(2)	183-193
ZDB-PUB-081218-19	19074041	Zou, J., Lathrop, K.L., Sun, M., and Wei, X.	Intact retinal pigment epithelium maintained by Nok is essential for retinal epithelial polarity and cellular patterning in zebrafish	The Journal of neuroscience : the official journal of the Society for Neuroscience	2008	28(50)	13684-13695
ZDB-PUB-081218-32	19084576	Felip, A., Zanuy, S., Pineda, R., Pinilla, L., Carrillo, M., Tena-Sempere, M., and Gómez, A.	Evidence for two distinct KiSS genes in non-placental vertebrates that encode kisspeptins with different gonadotropin-releasing activities in fish and mammals	Molecular and Cellular Endocrinology	2009	312(1-2)	61-71
ZDB-PUB-090112-13	19129512	Mouriec, K., Gueguen, M.M., Manuel, C., Percevault, F., Thieulant, M.L., Pakdel, F., and Kah, O.	Androgens Upregulate cyp19a1b (Aromatase B) Gene Expression in the Brain of Zebrafish (Danio rerio) Through Estrogen Receptors	Biology of reproduction	2009	80(5)	889-896
ZDB-PUB-090217-17	19201018	Lin, C., Spikings, E., Zhang, T., and Rawson, D.	Housekeeping genes for cryopreservation studies on zebrafish embryos and blastomeres	Theriogenology	2009	71(7)	1147-1155
ZDB-PUB-090217-2	19192305	Petrie-Hanson, L., Hohn, C., and Hanson, L.	Characterization of rag1 mutant zebrafish leukocytes	BMC immunology	2009	10	8
ZDB-PUB-090217-23	19204115	Chen, J., Ng, S.M., Chang, C., Zhang, Z., Bourdon, J.C., Lane, D.P., and Peng, J.	p53 Isoform delta113p53 is a p53 target gene that antagonizes p53 apoptotic activity via BclxL activation in zebrafish	Genes & Development	2009	23(3)	278-290
ZDB-PUB-090217-35	19211926	Li, H., Randall, W.R., and Du, S.J.	skNAC (skeletal Naca), a muscle-specific isoform of Naca (nascent polypeptide-associated complex alpha), is required for myofibril organization	FASEB journal : official publication of the Federation of American Societies for Experimental Biology	2009	23(6)	1988-2000
ZDB-PUB-090309-10	19253391	Schebesta, M., and Serluca, F.C.	olig1 expression identifies developing oligodendrocytes in zebrafish and requires hedgehog and notch signaling	Developmental Dynamics : an official publication of the American Association of Anatomists	2009	238(4)	887-898
ZDB-PUB-090318-10	19278998	Kleinschmidt, M.A., Wagner, T.U., Liedtke, D., Spahr, S., Samans, B., and Gaubatz, S.	Lin9 is required for mitosis and cell survival during early zebrafish development	The Journal of biological chemistry	2009	284(19)	13119-13127
ZDB-PUB-090318-8	19275935	Kitaguchi, T., Kawakami, K., and Kawahara, A.	Transcriptional regulation of a myeloid-lineage specific gene lysozyme C during zebrafish myelopoiesis	Mechanisms of Development	2009	126(5-6)	314-323
ZDB-PUB-090407-16	19344499	Vitorino, M., Jusuf, P.R., Maurus, D., Yukiko, Y., Higashijima, S.I., and Harris, W.A.	Vsx2 in the zebrafish retina: restricted lineages through derepression	Neural Development	2009	4	14
ZDB-PUB-090407-22	19347596	Haga, Y., Dominique, V.J. 3rd, and Du, S.J.	Analyzing notochord segmentation and intervertebral disc formation using the twhh:gfp transgenic zebrafish model	Transgenic Research	2009	18(5)	669-683
ZDB-PUB-090422-12	19374445	Fortier, S., Yang, X., Wang, Y., Bennett, R.A., and Strauss, P.R.	Base Excision Repair in Early Zebrafish Development: Evidence for DNA Polymerase Switching and Standby AP endonuclease Activity	Biochemistry	2009	48(23)	5396-5404
ZDB-PUB-090429-12	19397904	Lin, C., Spikings, E., Zhang, T., and Rawson, D.M.	Effect of chilling and cryopreservation on expression of Pax genes in zebrafish (Danio rerio) embryos and blastomeres	Cryobiology	2009	59(1)	42-47
ZDB-PUB-090526-28	19460416	Johnson, H.J., Gandhi, M.J., Shafizadeh, E., Langer, N.B., Pierce, E.L., Paw, B.H., Gilligan, D.M., and Drachman, J.G.	The in vivo inactivation of MASTL kinase results in thrombocytopenia	Experimental hematology	2009	37(8)	901-908
ZDB-PUB-090526-29	19460430	Fan, C.Y., Cowden, J., Simmons, S.O., Padilla, S., and Ramabhadran, R.	Gene expression changes in developing zebrafish as potential markers for rapid developmental neurotoxicity screening	Neurotoxicology and teratology	2010	32(1)	91-98
ZDB-PUB-090616-6	19481538	Yamauchi, H., Miyakawa, N., Miyake, A., and Itoh, N.	Fgf4 is required for left-right patterning of visceral organs in zebrafish	Developmental Biology	2009	332(1)	177-185
ZDB-PUB-090629-14	19542015	Hooper, A.T., Shmelkov, S.V., Gupta, S., Milde, T., Bambino, K., Gillen, K., Goetz, M., Chavala, S., Baljevic, M., Murphy, A.J., Valenzuela, D.M., Gale, N.W., Thurston, G., Yancopoulos, G.D., Vahdat, L., Evans, T., and Rafii, S.	Angiomodulin Is a Specific Marker of Vasculature and Regulates Vascular Endothelial Growth Factor-A-Dependent Neoangiogenesis	Circulation research	2009	105(2)	201-208
ZDB-PUB-090629-27	19551897	Lister, A.L., and Van Der Kraak, G.J.	Regulation of prostaglandin synthesis in ovaries of sexually-mature zebrafish (Danio rerio)	Molecular reproduction and development	2009	76(11)	1064-1075
ZDB-PUB-090706-18	19570844	Dodd, M.E., Hatzold, J., Mathias, J.R., Walters, K.B., Bennin, D.A., Rhodes, J., Kanki, J.P., Look, A.T., Hammerschmidt, M., and Huttenlocher, A.	The ENTH domain protein Clint1 is required for epidermal homeostasis in zebrafish	Development (Cambridge, England)	2009	136(15)	2591-2600
ZDB-PUB-090706-9	19563801	Nornes, S., Newman, M., Wells, S., Verdile, G., Martins, R.N., and Lardelli, M.	Independent and cooperative action of Psen2 with Psen1 in zebrafish embryos	Experimental cell research	2009	315(16)	2791-2801
ZDB-PUB-090714-3	19576895	Pikulkaew, S., De Nadai, A., Belvedere, P., Colombo, L., and Dalla Valle, L.	Expression analysis of steroid hormone receptor mRNAs during zebrafish embryogenesis	General and comparative endocrinology	2010	165(2)	215-220
ZDB-PUB-090714-7	19578401	Hultman, K.A., Budi, E.H., Teasley, D.C., Gottlieb, A.Y., Parichy, D.M., and Johnson, S.L.	Defects in ErbB-dependent establishment of adult melanocyte stem cells reveal independent origins for embryonic and regeneration melanocytes	PLoS Genetics	2009	5(7)	e1000544
ZDB-PUB-090731-9	19635460	Lee, C.Y., Hu, S.Y., Gong, H.Y., Chen, M.H., Lu, J.K., and Wu, J.L.	Suppression of myostatin with vector-based RNA interference causes a double-muscle effect in transgenic zebrafish	Biochemical and Biophysical Research Communications	2009	387(4)	766-771
ZDB-PUB-090807-4	19644983	Tomasini, A.J., Schuler, A.D., Zebala, J.A., and Mayer, A.N.	Photomorphs: A novel light-activated reagent for controlling gene expression in zebrafish	Genesis (New York, N.Y. : 2000)	2009	47(11)	736-743
ZDB-PUB-090828-24	19706208	Sissener, N.H., Johannessen, L.E., Hevrøy, E.M., Wiik-Nielsen, C.R., Berdal, K.G., Nordgreen, A., and Hemre, G.I.	Zebrafish ( Danio rerio) as a model for investigating the safety of GM feed ingredients (soya and maize); performance, stress response and uptake of dietary DNA sequences	The British journal of nutrition	2010	103(1)	3-15
ZDB-PUB-090828-29	19709642	Ngan, A.K., and Wang, Y.S.	Tissue-specific transcriptional regulation of monocarboxylate transporters (MCTs) during short-term hypoxia in zebrafish (Danio rerio)	Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology	2009	154(4)	396-405
ZDB-PUB-090828-4	19693513	Lemoine, C.M., Craig, P.M., Dhekney, K., Kim, J.J., and McClelland, G.B.	Temporal and spatial patterns of gene expression in skeletal muscles in response to swim training in adult zebrafish (Danio rerio)	Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology	2010	180(1)	151-160
ZDB-PUB-090921-14	19755169	Darbandi, S., and Franck, J.P.	A Comparative Study of Ryanodine Receptor (RyR) Gene Expression Levels in a Basal Ray-Finned Fish, Bichir (Polypterus ornatipinnis) and the Derived Euteleost Zebrafish (Danio rerio)	Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology	2009	154(4)	443-448
ZDB-PUB-091005-11	19797250	Henshall, T.L., Tucker, B., Lumsden, A.L., Nornes, S., Lardelli, M.T., and Richards, R.I.	Selective neuronal requirement for Huntingtin in the developing zebrafish	Human molecular genetics	2009	18(24)	4830-4842
ZDB-PUB-091005-4	19789285	Craig, P.M., Hogstrand, C., Wood, C.M., and McClelland, G.B.	Gene expression endpoints following chronic waterborne copper exposure in a genomic model organism, the zebrafish, Danio rerio	Physiological Genomics	2009	40(1)	23-33
ZDB-PUB-091005-6	19789858	Meng, X., Bartholomew, C., and Craft, J.A.	Differential expression of vitellogenin and oestrogen receptor genes in the liver of zebrafish, Danio Rerio	Analytical and bioanalytical chemistry	2010	396(2)	625-630
ZDB-PUB-091023-8	19799903	Tse, A.C., and Ge, W.	Spatial localization of EGF family ligands and receptors in the zebrafish ovarian follicle and their expression profiles during folliculogenesis	General and comparative endocrinology	2010	167(3)	397-407
ZDB-PUB-091101-2	19850031	Li, Q., Ritter, D., Yang, N., Dong, Z., Li, H., Chuang, J.H., and Guo, S.	A systematic approach to identify functional motifs within vertebrate developmental enhancers	Developmental Biology	2010	337(2)	484-495
ZDB-PUB-091113-6	17236135	Asai-Coakwell, M., French, C.R., Berry, K.M., Ye, M., Koss, R., Somerville, M., Mueller, R., van Heyningen, V., Waskiewicz, A.J., and Lehmann, O.J.	GDF6, a novel locus for a spectrum of ocular developmental anomalies	American journal of human genetics	2007	80(2)	306-315
ZDB-PUB-091120-21	19890097	Kobayashi, I., Ono, H., Moritomo, T., Kano, K., Nakanishi, T., and Suda, T.	Comparative gene expression analysis of zebrafish and mammals identifies common regulators in hematopoietic stem cells	Blood	2010	115(2)	e1-e9
ZDB-PUB-091204-30	19936306	Greiling, T.M., Houck, S.A., and Clark, J.I.	The zebrafish lens proteome during development and aging	Molecular Vision	2009	15	2313-2325
ZDB-PUB-091215-39	19959469	Xie, J., Yin, H., Nichols, T.D., Yoder, J.A., and Horowitz, J.M.	SP2 is a maternally inherited transcription factor required for embryonic development	The Journal of biological chemistry	2010	285(6)	4153-4164
ZDB-PUB-100112-16	20049323	Codina, M., Li, J., Gutiérrez, J., Kao, J.P., and Du, S.J.	Loss of Smyhc1 or Hsp90alpha1 function results in different effects on myofibril organization in skeletal muscles of zebrafish embryos	PLoS One	2010	5(1)	e8416
ZDB-PUB-100112-26	20060176	Choi, J.E., Kim, S., Ahn, J.H., Youn, P., Kang, J.S., Park, K., Yi, J., and Ryu, D.Y.	Induction of oxidative stress and apoptosis by silver nanoparticles in the liver of adult zebrafish	Aquatic toxicology (Amsterdam, Netherlands)	2010	100(2)	151-159
ZDB-PUB-100202-8	20107232	Bertrand, J.Y., Cisson, J.L., Stachura, D.L., and Traver, D.	Notch signaling distinguishes two waves of definitive hematopoiesis in the zebrafish embryo	Blood	2010	115(14)	2777-2783
ZDB-PUB-100211-23	20139970	Collins, R.T., Linker, C., and Lewis, J.	MAZe: a tool for mosaic analysis of gene function in zebrafish	Nature Methods	2010	7(3)	219-223
ZDB-PUB-100211-7	20123093	Pillay, L.M., Forrester, A.M., Erickson, T., Berman, J.N., and Waskiewicz, A.J.	The Hox cofactors Meis1 and Pbx act upstream of gata1 to regulate primitive hematopoiesis	Developmental Biology	2010	340(2)	306-317
ZDB-PUB-100223-20	20153437	Peng, K.C., Pan, C.Y., Chou, H.N., and Chen, J.Y.	Using an improved Tol2 transposon system to produce transgenic zebrafish with epinecidin-1 which enhanced resistance to bacterial infection	Fish & shellfish immunology	2010	28(5-6)	905-917
ZDB-PUB-100223-45	20163087	Craig, P.M., Wood, C.M., and McClelland, G.B.	Water Chemistry Alters Gene Expression and Physiological End Points of Chronic Waterborne Copper Exposure in Zebrafish, Danio rerio	Environmental science & technology	2010	44(6)	2156-2162
ZDB-PUB-100223-5	20147321	Müller, J.S., Jepson, C.D., Laval, S.H., Bushby, K., Straub, V., and Lochmüller, H.	Dok-7 promotes slow muscle integrity as well as neuromuscular junction formation in a zebrafish model of congenital myasthenic syndromes	Human molecular genetics	2010	19(9)	1726-1740
ZDB-PUB-100317-22	20223198	Zhao, X., He, X., Han, X., Yu, Y., Ye, F., Chen, Y., Hoang, T., Xu, X., Mi, Q.S., Xin, M., Wang, F., Appel, B., and Lu, Q.R.	MicroRNA-Mediated Control of Oligodendrocyte Differentiation	Neuron	2010	65(5)	612-626
ZDB-PUB-100317-31	20227414	De Wit, M., Keil, D., van der Ven, K., Vandamme, S., Witters, E., and De Coen, W.	An integrated transcriptomic and proteomic approach characterising estrogenic and metabolic effects of 17 alpha-ethinylestradiol in zebrafish (Danio rerio)	General and comparative endocrinology	2010	167(2)	190-201
ZDB-PUB-100330-42	20349143	Zhang, Y., Li, F., Sun, D., Liu, J., Liu, N., and Yu, Q.	Molecular analysis shows differential expression of R-spondin1 in zebrafish (Danio rerio) gonads	Molecular biology reports	2011	38(1)	275-282
ZDB-PUB-100408-26	20364122	Nicoli, S., Standley, C., Walker, P., Hurlstone, A., Fogarty, K.E., and Lawson, N.D.	MicroRNA-mediated integration of haemodynamics and Vegf signalling during angiogenesis	Nature	2010	464(7292)	1196-1200
ZDB-PUB-100427-16	20415643	Jones, H.S., Panter, G.H., Hutchinson, T.H., and Chipman, J.K.	Oxidative and conjugative xenobiotic metabolism in zebrafish larvae in vivo	Zebrafish	2010	7(1)	23-30
ZDB-PUB-100511-8	20441524	Sinha, D.K., Neveu, P., Gagey, N., Aujard, I., Le Saux, T., Rampon, C., Gauron, C., Kawakami, K., Leucht, C., Bally-Cuif, L., Volovitch, M., Bensimon, D., Jullien, L., and Vriz, S.	Photoactivation of the CreER(T2) Recombinase for Conditional Site-Specific Recombination with High Spatiotemporal Resolution	Zebrafish	2010	7(2)	199-204
ZDB-PUB-100601-5	20502708	Landsverk, M.L., Weiser, D.C., Hannibal, M.C., and Kimelman, D.	Alternative splicing of sept9a and sept9b in zebrafish produces multiple mRNA transcripts expressed throughout development	PLoS One	2010	5(5)	e10712
ZDB-PUB-100614-25	20530235	van Boxtel, A.L., Pieterse, B., Cenijn, P., Kamstra, J.H., Brouwer, A., van Wieringen, W., de Boer, J., and Legler, J.	Dithiocarbamates Induce Craniofacial Abnormalities and Downregulate sox9a during Zebrafish Development	Toxicological sciences : an official journal of the Society of Toxicology	2010	117(1)	209-217
ZDB-PUB-100702-15	20591335	Forbes, E.L., Preston, C.D., and Lokman, P.M.	Zebrafish (Danio rerio) and the egg size versus egg number trade off: effects of ration size on fecundity are not mediated by orthologues of the Fec gene	Reproduction, fertility, and development	2010	22(6)	1015-1021
ZDB-PUB-100702-2	20576807	Cao, Y., Park, A., and Sun, Z.	Intraflagellar Transport Proteins Are Essential for Cilia Formation and for Planar Cell Polarity	Journal of the American Society of Nephrology : JASN	2010	21(8)	1326-1333
ZDB-PUB-100820-23	20713961	Balla, K.M., Lugo-Villarino, G., Spitsbergen, J.M., Stachura, D.L., Hu, Y., Banuelos, K., Romo-Fewell, O., Aroian, R.V., and Traver, D.	Eosinophils in the zebrafish: prospective isolation, characterization, and eosinophilia induction by helminth determinants	Blood	2010	116(19)	3944-3954
ZDB-PUB-100830-3	20740047	McCurley, A.T., and Callard, G.V.	Time Course Analysis of Gene Expression Patterns in Zebrafish Eye During Optic Nerve Regeneration	Journal of experimental neuroscience	2010	2010(4)	17-33
ZDB-PUB-100910-45	20823231	Soza-Ried, C., Hess, I., Netuschil, N., Schorpp, M., and Boehm, T.	Essential role of c-myb in definitive hematopoiesis is evolutionarily conserved	Proceedings of the National Academy of Sciences of the United States of America	2010	107(40)	17304-17308
ZDB-PUB-101004-33	20859253	Kamminga, L.M., Luteijn, M.J., den Broeder, M.J., Redl, S., Kaaij, L.J., Roovers, E.F., Ladurner, P., Berezikov, E., and Ketting, R.F.	Hen1 is required for oocyte development and piRNA stability in zebrafish	The EMBO journal	2010	29(21)	3688-3700
ZDB-PUB-101018-25	20941541	Liu, Y., Wang, J., Fang, X., Zhang, H., and Dai, J.	The thyroid-disrupting effects of long-term perfluorononanoate exposure on zebrafish (Danio rerio)	Ecotoxicology (London, England)	2011	20(1)	47-55
ZDB-PUB-101018-4	20929554	Davidson, W.R., Kari, C., Ren, Q., Daroczi, B., Dicker, A.P., and Rodeck, U.	Differential regulation of p53 function by the N-terminal ΔNp53 and Δ113p53 isoforms in zebrafish embryos	BMC Developmental Biology	2010	10	102
ZDB-PUB-101122-11	21079149	Li, L., Jin, H., Xu, J., Shi, Y., and Wen, Z.	Irf8 regulates macrophage versus neutrophil fate during zebrafish primitive myelopoiesis	Blood	2011	117(4)	1359-1369
ZDB-PUB-110103-10	21179501	Feng, Y., Santoriello, C., Mione, M., Hurlstone, A., and Martin, P.	Live Imaging of Innate Immune Cell Sensing of Transformed Cells in Zebrafish Larvae: Parallels between Tumor Initiation and Wound Inflammation	PLoS Biology	2010	8(12)	e1000562
ZDB-PUB-110103-13	21181946	Oehlers, S.H., Flores, M.V., Okuda, K.S., Hall, C.J., Crosier, K.E., and Crosier, P.S.	A chemical enterocolitis model in zebrafish larvae that is dependent on microbiota and responsive to pharmacological agents	Developmental Dynamics : an official publication of the American Association of Anatomists	2011	240(1)	288-298
ZDB-PUB-110207-14	21281742	Casadei, R., Pelleri, M.C., Vitale, L., Facchin, F., Lenzi, L., Canaider, S., Strippoli, P., and Frabetti, F.	Identification of housekeeping genes suitable for gene expression analysis in the zebrafish	Gene expression patterns : GEP	2011	11(3-4)	271-6
ZDB-PUB-110207-3	21276787	Waxman, J.S., and Yelon, D.	Zebrafish retinoic acid receptors function as context-dependent transcriptional activators	Developmental Biology	2011	352(1)	128-140
ZDB-PUB-110316-12	21337346	Alexander, M.S., Kawahara, G., Kho, A.T., Howell, M.H., Pusack, T.J., Myers, J.A., Montanaro, F., Zon, L.I., Guyon, J.R., and Kunkel, L.M.	Isolation and transcriptome analysis of adult zebrafish cells enriched for skeletal muscle progenitors	Muscle & nerve	2011	43(5)	741-750
ZDB-PUB-110325-6	21390203	Weger, B.D., Sahinbas, M., Otto, G.W., Mracek, P., Armant, O., Dolle, D., Lahiri, K., Vallone, D., Ettwiller, L., Geisler, R., Foulkes, N.S., and Dickmeis, T.	The light responsive transcriptome of the zebrafish: function and regulation	PLoS One	2011	6(2)	e17080
ZDB-PUB-110405-2	21406720	Wittamer, V., Bertrand, J.Y., Gutschow, P.W., and Traver, D.	Characterization of the mononuclear phagocyte system in zebrafish	Blood	2011	117(26)	7126-7135
ZDB-PUB-110408-6	21415264	Stachura, D.L., Svoboda, O., Lau, R.P., Balla, K.M., Zon, L.I., Bartunek, P., and Traver, D.	Clonal analysis of hematopoietic progenitor cells in the zebrafish	Blood	2011	118(5)	1274-82
ZDB-PUB-110429-3	21435340	Aday, A.W., Zhu, L.J., Lakshmanan, A., Wang, J., and Lawson, N.D.	Identification of cis regulatory features in the embryonic zebrafish genome through large-scale profiling of H3K4me1 and H3K4me3 binding sites	Developmental Biology	2011	357(2)	450-62
ZDB-PUB-110511-16	21471154	Klein, C., Mikutta, J., Krueger, J., Scholz, K., Brinkmann, J., Liu, D., Veerkamp, J., Siegel, D., Abdelilah-Seyfried, S., and le Noble, F.	Neuron navigator 3a regulates liver organogenesis during zebrafish embryogenesis	Development (Cambridge, England)	2011	138(10)	1935-1945
ZDB-PUB-110602-7	21575247	Varga, M., Maegawa, S., and Weinberg, E.S.	Correct anteroposterior patterning of the zebrafish neurectoderm in the absence of the early dorsal organizer	BMC Developmental Biology	2011	11(1)	26
ZDB-PUB-110603-23	21614507	Tiedke, J., Gerlach, F., Mitz, S.A., Hankeln, T., and Burmester, T.	Ontogeny of globin expression in zebrafish (Danio rerio)	Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology	2011	181(8)	1011-21
ZDB-PUB-110613-5	21641336	Aranguren, X.L., Beerens, M., Vandevelde, W., Dewerchin, M., Carmeliet, P., and Luttun, A.	Transcription factor COUP-TFII is indispensable for venous and lymphatic development in zebrafish and Xenopus laevis	Biochemical and Biophysical Research Communications	2011	410(1)	121-6
ZDB-PUB-110823-15	21854210	Craig, P.M., and Moon, T.W.	Fasted Zebrafish Mimic Genetic and Physiological Responses in Mammals: A Model for Obesity and Diabetes?	Zebrafish	2011	8(3)	109-17
ZDB-PUB-111025-3	21980297	Smith, K.A., Noël, E., Thurlings, I., Rehmann, H., Chocron, S., and Bakkers, J.	Bmp and Nodal Independently Regulate lefty1 Expression to Maintain Unilateral Nodal Activity during Left-Right Axis Specification in Zebrafish	PLoS Genetics	2011	7(9)	e1002289
ZDB-PUB-111027-12	21998168	Tingaud-Sequeira, A., Knoll-Gellida, A., André, M., and Babin, P.J.	Vitellogenin Expression in White Adipose Tissue in Female Teleost Fish	Biology of reproduction	2012	86(2)	38
ZDB-PUB-111117-41	22069185	Mich, J.K., and Chen, J.K.	Hedgehog and retinoic acid signaling cooperate to promote motoneurogenesis in zebrafish	Development (Cambridge, England)	2011	138(23)	5113-5119
ZDB-PUB-111129-34	22116804	Chen, W., and Ge, W.	Ontogenic Expression Profiles of Gonadotropins (fshb and lhb) and Growth Hormone (gh) During Sexual Differentiation and Puberty Onset in Female Zebrafish	Biology of reproduction	2012	86(3)	73
ZDB-PUB-120111-8	22213104	Xu, L., Yin, W., Xia, J., Peng, M., Li, S., Lin, S., Pei, A., and Shum, X.	An anti-apoptotic role of SNX7 is required for liver development in zebrafish	Hepatology (Baltimore, Md.)	2012	55(6)	1985-1993
ZDB-PUB-120301-6	22361506	Xu, J., Gao, J., Li, J., Xue, L., Clark, K.J., Ekker, S.C., and Du, S.J.	Functional analysis of slow Myosin heavy chain 1 and myomesin-3 in sarcomere organization in zebrafish embryonic slow muscles	Journal of genetics and genomics = Yi chuan xue bao	2012	39(2)	69-80
ZDB-PUB-120406-11	22472102	David, R.M., Jones, H.S., Panter, G.H., Winter, M.J., Hutchinson, T.H., and Chipman, K.J.	Interference with xenobiotic metabolic activity by the commonly used vehicle solvents dimethylsulfoxide and methanol in zebrafish (Danio rerio) larvae but not Daphnia magna	Chemosphere	2012	88(8)	912-917
ZDB-PUB-120905-22	22945937	Woo, S., Housley, M.P., Weiner, O.D., and Stainier, D.Y.	Nodal signaling regulates endodermal cell motility and actin dynamics via Rac1 and Prex1	The Journal of cell biology	2012	198(5)	941-952
ZDB-PUB-121005-22	23014190	Cuello, S., Ximénez-Embún, P., Ruppen, I., Schonthaler, H.B., Ashman, K., Madrid, Y., Luque-Garcia, J.L., and Cámara, C.	Analysis of protein expression in developmental toxicity induced by MeHg in zebrafish	The Analyst	2012	137(22)	5302-5311
ZDB-PUB-130402-11	23470815	Moon, H.Y., Kim, O.H., Kim, H.T., Choi, J.H., Yeo, S.Y., Kim, N.S., Park, D.S., Oh, H.W., You, K.H., De Zoysa, M., and Kim, C.H.	Establishment of a transgenic zebrafish EF1α:Kaede for monitoring cell proliferation during regeneration	Fish & shellfish immunology	2013	34(5)	1390-1394
ZDB-PUB-130403-1	23475575	Deng, Q., Sarris, M., Bennin, D.A., Green, J.M., Herbomel, P., and Huttenlocher, A.	Localized bacterial infection induces systemic activation of neutrophils through Cxcr2 signaling in zebrafish	Journal of Leukocyte Biology	2013	93(5)	761-9
ZDB-PUB-130703-29	23706039	Wong, R.Y., Oxendine, S.E., and Godwin, J.	Behavioral and neurogenomic transcriptome changes in wild-derived zebrafish with fluoxetine treatment	BMC Genomics	2013	14	348
ZDB-PUB-130709-36	23748970	Banjo, T., Grajcarek, J., Yoshino, D., Osada, H., Miyasaka, K.Y., Kida, Y.S., Ueki, Y., Nagayama, K., Kawakami, K., Matsumoto, T., Sato, M., and Ogura, T.	Haemodynamically dependent valvulogenesis of zebrafish heart is mediated by flow-dependent expression of miR-21	Nature communications	2013	4	1978
ZDB-PUB-130712-15	23840646	Huang, Y., Harrison, M.R., Osorio, A., Kim, J., Baugh, A., Duan, C., Sucov, H.M., and Lien, C.L.	Igf Signaling is Required for Cardiomyocyte Proliferation during Zebrafish Heart Development and Regeneration	PLoS One	2013	8(6)	e67266
ZDB-PUB-130729-18	23865059	Dal Forno, G.O., Kist, L.W., de Azevedo, M.B., Fritsch, R.S., Pereira, T.C., Britto, R.S., Guterres, S.S., Külkamp-Guerreiro, I.C., Bonan, C.D., Monserrat, J.M., and Bogo, M.R.	Intraperitoneal Exposure to Nano/Microparticles of Fullerene (C<sub>60</sub>) Increases Acetylcholinesterase Activity and Lipid Peroxidation in Adult Zebrafish (<em>Danio rerio</em>) Brain	BioMed Research International	2013	2013	623789
ZDB-PUB-131204-13	24204616	Ruyra, A., Cano-Sarabia, M., Mackenzie, S.A., Maspoch, D., and Roher, N.	A Novel Liposome-Based Nanocarrier Loaded with an LPS-dsRNA Cocktail for Fish Innate Immune System Stimulation	PLoS One	2013	8(10)	e76338
ZDB-PUB-140101-40	24250795	Tan, S.J., Kee, M.Z., Mathuru, A.S., Burkholder, W.F., and Jesuthasan, S.J.	A microfluidic device to sort cells based on dynamic response to a stimulus	PLoS One	2013	8(11)	e78261
ZDB-PUB-140224-6	24367659	Lam, P.Y., Harvie, E.A., and Huttenlocher, A.	Heat shock modulates neutrophil motility in zebrafish	PLoS One	2013	8(12)	e84436
ZDB-PUB-140321-42	24462977	Superina, S., Borovina, A., and Ciruna, B.	Analysis of maternal-zygotic ugdh mutants reveals divergent roles for HSPGs in vertebrate embryogenesis and provides new insight into the initiation of left-right asymmetry	Developmental Biology	2014	387(2)	154-166
ZDB-PUB-140502-15	24523457	Le Guen, L., Karpanen, T., Schulte, D., Harris, N.C., Koltowska, K., Roukens, G., Bower, N.I., van Impel, A., Stacker, S.A., Achen, M.G., Schulte-Merker, S., and Hogan, B.M.	Ccbe1 regulates Vegfc-mediated induction of Vegfr3 signaling during embryonic lymphangiogenesis	Development (Cambridge, England)	2014	141(6)	1239-1249
ZDB-PUB-140513-198	24704546	de Oliveira, G.M., Kist, L.W., Pereira, T.C., Bortolotto, J.W., Paquete, F.L., de Oliveira, E.M., Leite, C.E., Bonan, C.D., de Souza Basso, N.R., Papaleo, R.M., Bogo, M.R.	Transient modulation of acetylcholinesterase activity caused by exposure to dextran-coated iron oxide nanoparticles in brain of adult zebrafish	Comparative biochemistry and physiology. Toxicology & pharmacology : CBP	2014	162	77-84
ZDB-PUB-140513-29	24802872	Tuttle, A.M., Hoffman, T.L., Schilling, T.F.	Rabconnectin-3a regulates vesicle endocytosis and canonical Wnt signaling in zebrafish neural crest migration	PLoS Biology	2014	12	e1001852
ZDB-PUB-140524-8	24852213	Hall, C.J., Boyle, R.H., Sun, X., Wicker, S.M., Misa, J.P., Krissansen, G.W., Print, C.G., Crosier, K.E., Crosier, P.S.	Epidermal cells help coordinate leukocyte migration during inflammation through fatty acid-fuelled matrix metalloproteinase production	Nature communications	2014	5	3880
ZDB-PUB-140728-21	25056693	Lee, H.C., Lin, Y.Z., Lai, Y.T., Huang, W.J., Hu, J.R., Tsai, J.N., Tsai, H.J.	Glycogen Synthase Kinase 3 beta in somites plays a role during the angiogenesis of zebrafish embryos	The FEBS journal	2014	281(19)	4367-83
ZDB-PUB-140730-19	25064675	Chen, Z., Ballar, P., Fu, Y., Luo, J., Du, S., Fang, S.	The E3 Ubiquitin Ligase gp78 Protects against ER Stress in Zebrafish Liver	Journal of genetics and genomics = Yi chuan xue bao	2014	41	357-68
ZDB-PUB-140819-1	25132384	Salta, E., Lau, P., Sala Frigerio, C., Coolen, M., Bally-Cuif, L., De Strooper, B.	A Self-Organizing miR-132/Ctbp2 Circuit Regulates Bimodal Notch Signals and Glial Progenitor Fate Choice during Spinal Cord Maturation	Developmental Cell	2014	30(4)	423-36
ZDB-PUB-141014-1	25310091	Vanhauwaert, S., Van Peer, G., Rihani, A., Janssens, E., Rondou, P., Lefever, S., De Paepe, A., Coucke, P.J., Speleman, F., Vandesompele, J., Willaert, A.	Expressed Repeat Elements Improve RT-qPCR Normalization across a Wide Range of Zebrafish Gene Expression Studies	PLoS One	2014	9	e109091
ZDB-PUB-141015-1	25313964	Fukui, H., Terai, K., Nakajima, H., Chiba, A., Fukuhara, S., Mochizuki, N.	S1P-Yap1 Signaling Regulates Endoderm Formation Required for Cardiac Precursor Cell Migration in Zebrafish	Developmental Cell	2014	31	128-136
ZDB-PUB-141019-5	25326170	Wong, R.Y., McLeod, M.M., Godwin, J.	Limited sex-biased neural gene expression patterns across strains in Zebrafish (Danio rerio)	BMC Genomics	2014	15	905
ZDB-PUB-141202-8	25434820	Tzung, K.W., Goto, R., Saju, J.M., Sreenivasan, R., Saito, T., Arai, K., Yamaha, E., Hossain, M.S., Calvert, M.E., Orbán, L.	Early Depletion of Primordial Germ Cells in Zebrafish Promotes Testis Formation	Stem Cell Reports	2015	4(1)	61-73
ZDB-PUB-141203-33	25456234	Chen, Y.Y., Zhu, J.Y., Chan, K.M.	Effects of cadmium on cell proliferation, apoptosis, and proto-oncogene expression in zebrafish liver cells	Aquatic toxicology (Amsterdam, Netherlands)	2014	157C	196-206
ZDB-PUB-141220-1	25526262	Ellis, L.D., Soo, E.C., Achenbach, J.C., Morash, M.G., Soanes, K.H.	Use of the Zebrafish Larvae as a Model to Study Cigarette Smoke Condensate Toxicity	PLoS One	2014	9	e115305
ZDB-PUB-141224-21	25533206	Kok, F.O., Shin, M., Ni, C., Gupta, A., Grosse, A.S., van Impel, A., Kirchmaier, B.C., Peterson-Maduro, J., Kourkoulis, G., Male, I., DeSantis, D.F., Sheppard-Tindell, S., Ebarasi, L., Betsholtz, C., Schulte-Merker, S., Wolfe, S.A., Lawson, N.D.	Reverse Genetic Screening Reveals Poor Correlation between Morpholino-Induced and Mutant Phenotypes in Zebrafish	Developmental Cell	2015	32(1)	97-108
ZDB-PUB-150103-1	25555130	Burczyk, M.S., Burkhalter, M.D., Blätte, T., Matysik, S., Caron, M.G., Barak, L.S., Philipp, M.	Phenotypic Regulation of the Sphingosine 1-Phosphate Receptor Miles Apart by G Protein-Coupled Receptor Kinase 2	Biochemistry	2015	54(3)	765-75
ZDB-PUB-150128-9	25624351	Ojanen, M.J., Turpeinen, H., Cordova, Z.M., Hammarén, M.M., Harjula, S.K., Parikka, M., Rämet, M., Pesu, M.	The Proprotein Convertase Subtilisin/Kexin FurinA Regulates Zebrafish Host Response against Mycobacterium marinum	Infection and Immunity	2015	83(4)	1431-42
ZDB-PUB-150301-12	25722433	Craig, M.P., Grajevskaja, V., Liao, H.K., Balciuniene, J., Ekker, S.C., Park, J.S., Essner, J.J., Balciunas, D., Sumanas, S.	Etv2 and Fli1b Function Together as Key Regulators of Vasculogenesis and Angiogenesis	Arterioscler. Thromb. Vasc. Biol.	2015	35(4)	865-76
ZDB-PUB-150404-1	25840431	Manchenkov, T., Pasillas, M.P., Haddad, G.G., Imam, F.B.	Novel Genes Critical for Hypoxic Preconditioning in Zebrafish Are Regulators of Insulin and Glucose Metabolism	G3 (Bethesda)	2015	5(6)	1107-16
ZDB-PUB-150415-4	25869932	Roberto, V.P., Tiago, D.M., Gautvik, K., Cancela, M.L.	Evidence for the conservation of miR-223 in zebrafish (<em>Danio rerio</em>): Implications for function	Gene	2015	566(1)	54-62
ZDB-PUB-150415-7	25869585	Dubrulle, J., Jordan, B.M., Akhmetova, L., Farrell, J.A., Kim, S.H., Solnica-Krezel, L., Schier, A.F.	Response to Nodal morphogen gradient is determined by the kinetics of target gene induction	eLIFE	2015	4	
ZDB-PUB-150603-7	26032017	Wong, R.Y., Lamm, M.S., Godwin, J.	Characterizing the neurotranscriptomic states in alternative stress coping styles	BMC Genomics	2015	16	425
ZDB-PUB-150617-5	26077926	Assis, L.H., Crespo, D., Morais, R.D., França, L.R., Bogerd, J., Schulz, R.W.	INSL3 stimulates spermatogonial differentiation in testis of adult zebrafish (Danio rerio)	Cell and tissue research	2016	363(2)	579-88
ZDB-PUB-150722-4	26196239	Zhang, X., Zhong, Y., Tian, H., Wang, W., Ru, S.	Impairment of the cortisol stress response mediated by the hypothalamus-pituitary-interrenal (HPI) axis in zebrafish (Danio rerio) exposed to monocrotophos pesticide	Comparative biochemistry and physiology. Toxicology & pharmacology : CBP	2015	176-177	10-6
ZDB-PUB-150725-2	26207345	Nóbrega, R.H., de Souza Morais, R.D., Crespo, D., de Waal, P.P., de França, L.R., Schulz, R.W., Bogerd, J.	Fsh stimulates spermatogonial proliferation and differentiation in zebrafish via Igf3	Endocrinology	2015	156(10)	3804-17
ZDB-PUB-150916-8	26369931	Okuda, K.S., Misa, J.P., Oehlers, S.H., Hall, C.J., Ellett, F., Alasmari, S., Lieschke, G.J., Crosier, K.E., Crosier, P.S., Astin, J.W.	A zebrafish model of inflammatory lymphangiogenesis	Biology Open	2015	4(10)	1270-80
ZDB-PUB-150920-1	26386379	Huang, W., Wang, J., Liang, Y., Ge, W., Wang, G., Li, Y., Yin Chung, H.	Potent anti-angiogenic component in croton crassifolius and its mechanism of action	Journal of ethnopharmacology	2015	175	185-91
ZDB-PUB-150924-13	26391449	Campbell, C., Su, T., Lau, R.P., Shah, A., Laurie, P.C., Avalos, B., Aggio, J., Harris, E., Traver, D., Stachura, D.L.	Zebrafish Embryonic Stromal Trunk (ZEST) cells support hematopoietic stem and progenitor cell (HSPC) proliferation, survival, and differentiation	Experimental hematology	2015	43(12)	1047-61
ZDB-PUB-151010-1	26452104	Chu, L., Li, J., Liu, Y., Cheng, C.H.	Gonadotropin signaling in zebrafish ovary and testis development: insights from gene knockout study	Molecular endocrinology (Baltimore, Md.)	2015	29(12)	1743-58
ZDB-PUB-151101-10	26517177	Gagnaire, B., Cavalié, I., Pereira, S., Floriani, M., Dubourg, N., Camilleri, V., Adam-Guillermin, C.	External gamma irradiation-induced effects in early-life stages of zebrafish, Danio rerio	Aquatic toxicology (Amsterdam, Netherlands)	2015	169	69-78
ZDB-PUB-151121-13	26584608	Feng, G., Long, Y., Peng, J., Li, Q., Cui, Z.	Transcriptomic characterization of the dorsal lobes after hepatectomy of the ventral lobe in zebrafish	BMC Genomics	2015	16	979
ZDB-PUB-151218-7	26675370	Lang, X., Wang, L., Zhang, Z.	Stability evaluation of reference genes for real-time PCR in zebrafish (Danio rerio) exposed to cadmium chloride and subsequently infected by bacteria Aeromonas hydrophila	Aquatic toxicology (Amsterdam, Netherlands)	2016	170	240-250
ZDB-PUB-151222-10	26687135	Kim, J., Kim, C.Y., Song, J., Oh, H., Kim, C.H., Park, J.H.	Trimethyltin chloride inhibits neuronal cell differentiation in zebrafish embryo neurodevelopment	Neurotoxicology and teratology	2016	54	29-35
ZDB-PUB-160116-8	26769247	Capiotti, K.M., Siebel, A.M., Kist, L.W., Bogo, M.R., Bonan, C.D., Da Silva, R.S.	Hyperglycemia alters E-NTPDases, ecto-5'-nucleotidase, and ectosolic and cytosolic adenosine deaminase activities and expression from encephala of adult zebrafish (Danio rerio)	Purinergic signalling	2016	12(2)	211-20
ZDB-PUB-160123-6	26794661	Chen, Z., Wan, X., Hou, Q., Shi, S., Wang, L., Chen, P., Zhu, X., Zeng, C., Qin, W., Zhou, W., Liu, Z.	GADD45B mediates podocyte injury in zebrafish by activating the ROS-GADD45B-p38 pathway	Cell Death & Disease	2016	7	e2068
ZDB-PUB-160131-2	26825552	Wang, X., Ling, C.C., Li, L., Qin, Y., Qi, J., Liu, X., You, B., Shi, Y., Zhang, J., Jiang, Q., Xu, H., Sun, C., You, Y., Chai, R., Liu, D.	MicroRNA-10a/10b represses a novel target gene mib1 to regulate angiogenesis	Cardiovascular research	2016	110(1)	140-50
ZDB-PUB-160209-7	26853486	Das, D., Nath, P., Pal, S., Hajra, S., Ghosh, P., Maitra, S.	Expression of two insulin receptor subtypes, insra and insrb, in zebrafish (Danio rerio) ovary and involvement of insulin action in ovarian function	General and comparative endocrinology	2016	239	21-31
ZDB-PUB-160226-10	26909029	Teles, M.C., Cardoso, S.D., Oliveira, R.F.	Social Plasticity Relies on Different Neuroplasticity Mechanisms across the Brain Social Decision-Making Network in Zebrafish	Frontiers in behavioral neuroscience	2016	10	16
ZDB-PUB-160315-7	26972049	Lau, M.C., Kwong, E.M., Lai, K.P., Li, J.W., Ho, J.C., Chan, T.F., Wong, C.K., Jiang, Y.J., Tse, W.K.	Pathogenesis of POLR1C-dependent type 3 treacher Collins syndrome revealed by a zebrafish model	Biochimica et biophysica acta. Molecular basis of disease	2016	1862(6)	1147-58
ZDB-PUB-160407-4	27049946	Kang, J., Hu, J., Karra, R., Dickson, A.L., Tornini, V.A., Nachtrab, G., Gemberling, M., Goldman, J.A., Black, B.L., Poss, K.D.	Modulation of tissue repair by regeneration enhancer elements	Nature	2016	532(7598)	201-6
ZDB-PUB-160429-1	27123951	Svoboda, O., Stachura, D.L., Machonova, O., Zon, L.I., Traver, D., Bartunek, P.	Ex vivo tools for the clonal analysis of zebrafish hematopoiesis	Nature Protocols	2016	11	1007-1020
ZDB-PUB-160506-8	27146468	Milash, B., Gao, J., Stevenson, T.J., Son, J.H., Dahl, T., Bonkowsky, J.L.	Temporal Dysynchrony in brain connectivity gene expression following hypoxia	BMC Genomics	2016	17	334
ZDB-PUB-160614-8	27292639	Karanth, S., Zinkhan, E.K., Hill, J.T., Yost, H.J., Schlegel, A.	FOXN3 Regulates Hepatic Glucose Utilization	Cell Reports	2016	15(12)	2745-55
ZDB-PUB-160628-2	27348263	Svensson, J., Mustafa, A., Fick, J., Schmitz, M., Brunström, B.	Developmental exposure to progestins causes male bias and precocious puberty in zebrafish (Danio rerio)	Aquatic toxicology (Amsterdam, Netherlands)	2016	177	316-323
ZDB-PUB-160709-6	27390302	Wilson, K.S., Tucker, C.S., Al-Dujaili, E.A., Holmes, M.C., Hadoke, P.W., Kenyon, C.J., Denvir, M.A.	Early-life glucocorticoids programme behaviour and metabolism in adulthood in zebrafish	The Journal of endocrinology	2016	230	125-42
ZDB-PUB-160816-9	27521797	Hrubik, J., Glisic, B., Samardzija, D., Stanic, B., Pogrmic-Majkic, K., Fa, S., Andric, N.	Effect of PMA-induced protein kinase C activation on development and apoptosis in early zebrafish embryos	Comparative biochemistry and physiology. Toxicology & pharmacology : CBP	2016	190	24-31
ZDB-PUB-160827-7	27562099	Zhang, C., Ellis, J.L., Yin, C.	Inhibition of vascular endothelial growth factor signaling facilitates liver repair from acute ethanol-induced injury in zebrafish	Disease models & mechanisms	2016	9(11)	1383-1396
ZDB-PUB-160828-3	27566230	Crespo, D., Assis, L.H., Furmanek, T., Bogerd, J., Schulz, R.W.	Expression profiling identifies Sertoli and Leydig cell genes as Fsh targets in adult zebrafish testis	Molecular and Cellular Endocrinology	2016	437	237-251
ZDB-PUB-160902-11	27580812	Houbrechts, A.M., Delarue, J., Gabriëls, I.J., Sourbron, J., Darras, V.M.	Permanent Deiodinase Type 2 Deficiency Strongly Perturbs Zebrafish Development, Growth, and Fertility	Endocrinology	2016	157	3668-81
ZDB-PUB-161113-3	27837107	Rosowski, E.E., Deng, Q., Keller, N.P., Huttenlocher, A.	Rac2 Functions in Both Neutrophils and Macrophages To Mediate Motility and Host Defense in Larval Zebrafish	Journal of immunology (Baltimore, Md. : 1950)	2016	197(12)	4780-4790
ZDB-PUB-161117-6	27846817	Hung, I.C., Hsiao, Y.C., Sun, H.S., Chen, T.M., Lee, S.J.	MicroRNAs regulate gene plasticity during cold shock in zebrafish larvae	BMC Genomics	2016	17	922
ZDB-PUB-161123-2	27875093	Sasaki, T., Lian, S., Khan, A., Llop, J.R., Samuelson, A.V., Chen, W., Klionsky, D.J., Kishi, S.	Autolysosome biogenesis and developmental senescence are regulated by both Spns1 and v-ATPase	Autophagy	2017	13(2)	386-403
ZDB-PUB-161126-1	27886581	Huang, S.S., Benskin, J.P., Veldhoen, N., Chandramouli, B., Butler, H., Helbing, C.C., Cosgrove, J.R.	A multi-omic approach to elucidate low-dose effects of xenobiotics in zebrafish (Danio rerio) larvae	Aquatic toxicology (Amsterdam, Netherlands)	2017	182	102-112
ZDB-PUB-161203-8	27906609	Lopes, F.M., Caldas, S.S., Primel, E.G., da Rosa, C.E.	Glyphosate Adversely Affects Danio rerio Males: Acetylcholinesterase Modulation and Oxidative Stress	Zebrafish	2017	14(2)	97-105
ZDB-PUB-161220-10	25416946	Espín-Palazón, R., Stachura, D.L., Campbell, C.A., García-Moreno, D., Del Cid, N., Kim, A.D., Candel, S., Meseguer, J., Mulero, V., Traver, D.	Proinflammatory signaling regulates hematopoietic stem cell emergence	Cell	2014	159	1070-85
ZDB-PUB-161222-7	27999363	Nasri, A., Valverde, A.J., Roche, D.B., Desrumaux, C., Clair, P., Beyrem, H., Chaloin, L., Ghysen, A., Perrier, V.	Neurotoxicity of a Biopesticide Analog on Zebrafish Larvae at Nanomolar Concentrations	International Journal of Molecular Sciences	2016	17(12)	
ZDB-PUB-170111-3	28071661	Wild, R., Klems, A., Takamiya, M., Hayashi, Y., Strähle, U., Ando, K., Mochizuki, N., van Impel, A., Schulte-Merker, S., Krueger, J., Preau, L., le Noble, F.	Neuronal sFlt1 and Vegfaa determine venous sprouting and spinal cord vascularization	Nature communications	2017	8	13991
ZDB-PUB-170122-2	28108843	Baltrunaite, K., Craig, M.P., Palencia Desai, S., Chaturvedi, P., Pandey, R.N., Hegde, R.S., Sumanas, S.	ETS transcription factors Etv2 and Fli1b are required for tumor angiogenesis	Angiogenesis	2017	20(3)	307-323
ZDB-PUB-170126-8	28118819	Schall, K.A., Thornton, M.E., Isani, M., Holoyda, K.A., Hou, X., Lien, C.L., Grubbs, B.H., Grikscheit, T.C.	Short bowel syndrome results in increased gene expression associated with proliferation, inflammation, bile acid synthesis and immune system activation: RNA sequencing a zebrafish SBS model	BMC Genomics	2017	18	23
ZDB-PUB-170131-5	28132765	Zhang, D., Wang, J., Zhou, C., Xiao, W.	Zebrafish akt2 is essential for survival, growth, bone development, and glucose homeostasis	Mechanisms of Development	2017	143	42-52
ZDB-PUB-170202-2	28146072	Khezri, A., Fraser, T.W., Nourizadeh-Lillabadi, R., Kamstra, J.H., Berg, V., Zimmer, K.E., Ropstad, E.	A Mixture of Persistent Organic Pollutants and Perfluorooctanesulfonic Acid Induces Similar Behavioural Responses, but Different Gene Expression Profiles in Zebrafish Larvae	International Journal of Molecular Sciences	2017	18(2)	
ZDB-PUB-170206-5	28159303	Pradhan, A., Ivarsson, P., Ragnvaldsson, D., Berg, H., Jass, J., Olsson, P.E.	Transcriptional responses of zebrafish to complex metal mixtures in laboratory studies overestimates the responses observed with environmental water	The Science of the total environment	2017	584-585	1138-1146
ZDB-PUB-170214-96	26469318	Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R.	RFX transcription factors are essential for hearing in mice	Nature communications	2015	6	8549
ZDB-PUB-170222-15	28217548	Thang, N.D., Diep, P.N., Lien, P.T., Lien, L.T.	<i>Polygonum multiflorum</i> root extract as a potential candidate for treatment of early graying hair.	Journal of advanced pharmaceutical technology & research	2017	8	8-13
ZDB-PUB-170223-3	28224202	Liu, Y., Zhu, Z., Ho, I.H., Shi, Y., Xie, Y., Li, J., Zhang, Y., Chan, M.T., Cheng, C.H.	Germline-specific dgcr8 knockout in zebrafish using a BACK approach	Cellular and molecular life sciences : CMLS	2017	74(13)	2503–2511
ZDB-PUB-170301-5	28243233	García-Valtanen, P., Martínez-López, A., López-Muñoz, A., Bello-Perez, M., Medina-Gali, R.M., Ortega-Villaizán, M.D., Varela, M., Figueras, A., Mulero, V., Novoa, B., Estepa, A., Coll, J.	Zebra Fish Lacking Adaptive Immunity Acquire an Antiviral Alert State Characterized by Upregulated Gene Expression of Apoptosis, Multigene Families, and Interferon-Related Genes	Frontiers in immunology	2017	8	121
ZDB-PUB-170303-3	28252672	Siegerist, F., Blumenthal, A., Zhou, W., Endlich, K., Endlich, N.	Acute podocyte injury is not a stimulus for podocytes to migrate along the glomerular basement membrane in zebrafish larvae	Scientific Reports	2017	7	43655
ZDB-PUB-170303-4	28252024	Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G.	Evolution of complexity in the zebrafish synapse proteome	Nature communications	2017	8	14613
ZDB-PUB-170308-9	28265462	Klangnurak, W., Tokumoto, T.	Fine selection of up-regulated genes during ovulation by <i>in vivo</i> induction of oocyte maturation and ovulation in zebrafish.	Zoological letters	2017	3	2
ZDB-PUB-170317-3	28300168	Wolf, A., Aggio, J., Campbell, C., Wright, F., Marquez, G., Traver, D., Stachura, D.L.	Zebrafish Caudal Haematopoietic Embryonic Stromal Tissue (CHEST) Cells Support Haematopoiesis	Scientific Reports	2017	7	44644
ZDB-PUB-170404-5	28371364	Santos da Rosa, J.G., Alcântara Barcellos, H.H., Fagundes, M., Variani, C., Rossini, M., Kalichak, F., Koakoski, G., Acosta Oliveira, T., Idalencio, R., Frandoloso, R., Piato, A.L., José Gil Barcellos, L.	Muscarinic receptors mediate the endocrine-disrupting effects of an organophosphorus insecticide in zebrafish	Environmental toxicology	2017	32(7)	1964-1972
ZDB-PUB-170427-9	28441764	den Broeder, M.J., Moester, M.J.B., Kamstra, J.H., Cenijn, P.H., Davidoiu, V., Kamminga, L.M., Ariese, F., de Boer, J.F., Legler, J.	Altered Adipogenesis in Zebrafish Larvae Following High Fat Diet and Chemical Exposure Is Visualised by Stimulated Raman Scattering Microscopy	International Journal of Molecular Sciences	2017	18(4)	
ZDB-PUB-170508-6	28473760	Porseryd, T., Volkova, K., Reyhanian Caspillo, N., Källman, T., Dinnetz, P., Porsh Hällström, I.	Persistent Effects of Developmental Exposure to 17&#x3b1;-Ethinylestradiol on the Zebrafish (<i>Danio rerio</i>) Brain Transcriptome and Behavior.	Frontiers in behavioral neuroscience	2017	11	69
ZDB-PUB-170514-3	28500283	Wu, T.Y., Wang, Y.S., Song, Y.C., Chen, Z.Y., Chen, Y.T., Chiu, C.C., Wu, C.Y.	Fine-tune regulation of carboxypeptidase N1 controls vascular patterning during zebrafish development	Scientific Reports	2017	7	1852
ZDB-PUB-170523-9	28529144	Fraser, T.W.K., Khezri, A., Jusdado, J.G.H., Lewandowska-Sabat, A.M., Henry, T., Ropstad, E.	Toxicant induced behavioural aberrations in larval zebrafish are dependent on minor methodological alterations	Toxicology letters	2017	276	62-68
ZDB-PUB-170531-11	28554511	Kossack, M., Hein, S., Juergensen, L., Siragusa, M., Benz, A., Katus, H.A., Most, P., Hassel, D.	Induction of cardiac dysfunction in developing and adult zebrafish by chronic isoproterenol stimulation	Journal of Molecular and Cellular Cardiology	2017	108	95-105
ZDB-PUB-170611-2	28601011	Diamante, G., do Amaral E Silva Müller, G., Menjivar-Cervantes, N., Xu, E.G., Volz, D.C., Dias Bainy, A.C., Schlenk, D.	Developmental toxicity of hydroxylated chrysene metabolites in zebrafish embryos	Aquatic toxicology (Amsterdam, Netherlands)	2017	189	77-86
ZDB-PUB-170622-4	28634081	Ge, C., Lu, W., Chen, A.	Quantitative proteomic reveals the dynamic of protein profile during zebrafish final oocyte maturation	Biochemical and Biophysical Research Communications	2017	490(3)	657-663
ZDB-PUB-170709-4	28687604	Watchon, M., Yuan, K.C., Mackovski, N., Svahn, A.J., Cole, N.J., Goldsbury, C., Rinkwitz, S., Becker, T.S., Nicholson, G.A., Laird, A.S.	Calpain inhibition is protective in Machado-Joseph disease zebrafish due to induction of autophagy	The Journal of neuroscience : the official journal of the Society for Neuroscience	2017	37(32)	7782-7794
ZDB-PUB-170726-15	28738802	Lee, S.L.J., Horsfield, J.A., Black, M.A., Rutherford, K., Fisher, A., Gemmell, N.J.	Histological and transcriptomic effects of 17α-methyltestosterone on zebrafish gonad development	BMC Genomics	2017	18	557
ZDB-PUB-170805-14	28771527	Kim, J.G., Bae, S.J., Lee, H.S., Park, J.H., Kim, K.W.	Claudin5a is required for proper inflation of Kupffer's vesicle lumen and organ laterality	PLoS One	2017	12	e0182047
ZDB-PUB-170806-1	28779539	Haarder, S., Kania, P.W., Holm, T.L., von Gersdorff Jørgensen, L., Buchmann, K.	Effect of ES-products from Anisakis (Nematoda: Anisakidae) on experimentally induced colitis in adult zebrafish	Parasite immunology	2017	39(10)	
ZDB-PUB-170809-12	27126199	Lamont, R.E., Wu, C.Y., Ryu, J.R., Vu, W., Davari, P., Sobering, R.E., Kennedy, R.M., Munsie, N.M., Childs, S.J.	The LIM-homeodomain transcription factor Islet2a promotes angioblast migration	Developmental Biology	2016	414	181-92
ZDB-PUB-170811-2	28796253	Nguyen-Chi, M., Laplace-Builhé, B., Travnickova, J., Luz-Crawford, P., Tejedor, G., Lutfalla, G., Kissa, K., Jorgensen, C., Djouad, F.	TNF signaling and macrophages govern fin regeneration in zebrafish larvae	Cell Death & Disease	2017	8	e2979
ZDB-PUB-170813-4	28801227	Li, G., Tang, H., Chen, Y., Yin, Y., Ogawa, S., Liu, M., Guo, Y., Qi, X., Liu, Y., Parhar, I.S., Liu, X., Lin, H.	Estrogen directly stimulates LHb expression at the pituitary level during puberty in female zebrafish	Molecular and Cellular Endocrinology	2017	461	1-11
ZDB-PUB-170907-3	28875937	Tavares, B., Jacinto, R., Sampaio, P., Pestana, S., Pinto, A., Vaz, A., Roxo-Rosa, M., Gardner, R., Lopes, T., Schilling, B., Henry, I., Saúde, L., Lopes, S.S.	Notch/Her12 signalling modulates, motile/immotile cilia ratio downstream of <i>Foxj1a</i> in zebrafish left-right organizer.	eLIFE	2017	6	
ZDB-PUB-171009-2		Sun, W., Tan, X., Zhang, P., Zhang, Y., Xu, Y.	Characterization of DYRK2 (dual-specificity tyrosinephosphorylation-regulated kinase 2) from Zebrafish (Dario rerio)	Chinese Journal of Oceanology and Limnology	2010	28(4)	720-724
ZDB-PUB-171028-1	29078070	Fraser, T.W.K., Khezri, A., Lewandowska-Sabat, A.M., Henry, T., Ropstad, E.	Endocrine disruptors affect larval zebrafish behavior: Testing potential mechanisms and comparisons of behavioral sensitivity to alternative biomarkers	Aquatic toxicology (Amsterdam, Netherlands)	2017	193	128-135
ZDB-PUB-171110-2	29121543	Lin, J., Wang, C., Liu, J., Dahlgren, R.A., Ai, W., Zeng, A., Wang, X., Wang, H.	Up-stream mechanisms for up-regulation of miR-125b from triclosan exposure to zebrafish (Danio rerio)	Aquatic toxicology (Amsterdam, Netherlands)	2017	193	256-267
ZDB-PUB-171113-12	29124181	Gonzalez-Nunez, V.	Role of <i>gabra2</i>, GABA<sub>A</sub> receptor alpha-2 subunit, in CNS development.	Biochemistry and biophysics reports	2015	3	190-201
ZDB-PUB-171117-5	29139475	Jijon, H.B., Suarez-Lopez, L., Diaz, O.E., Das, S., De Calisto, Parada-Kusz, M., J., Yaffe, M.B., Pittet, M.J., Mora, J.R., Belkaid, Y., Xavier, R.J., Villablanca, E.J.	Intestinal epithelial cell-specific RAR&#945; depletion results in aberrant epithelial cell homeostasis and underdeveloped immune system	Mucosal immunology	2017	11(3)	703-715
ZDB-PUB-171117-8	29140251	Montague, T.G., Schier, A.F.	Vg1-Nodal heterodimers are the endogenous inducers of mesendoderm	eLIFE	2017	6	
ZDB-PUB-171205-7	29201567	Posner, M., Murray, K.L., McDonald, M.S., Eighinger, H., Andrew, B., Drossman, A., Haley, Z., Nussbaum, J., David, L.L., Lampi, K.J.	The zebrafish as a model system for analyzing mammalian and native <i>&#x3b1;</i>-crystallin promoter function.	PeerJ	2017	5	e4093
ZDB-PUB-171209-1	29216900	Ribas, L., Vanezis, K., Imués, M.A., Piferrer, F.	Treatment with a DNA methyltransferase inhibitor feminizes zebrafish and induces long-term expression changes in the gonads	Epigenetics & chromatin	2017	10	59
ZDB-PUB-171212-1	29223822	Huang, M., Jiao, J., Wang, J., Xia, Z., Zhang, Y.	Exposure to acrylamide induces cardiac developmental toxicity in zebrafish during cardiogenesis	Environmental pollution (Barking, Essex : 1987)	2017	234	656-666
ZDB-PUB-171219-10	29248853	Hurem, S., Martín, L.M., Lindeman, L., Brede, D.A., Salbu, B., Lyche, J.L., Aleström, P., Kamstra, J.H.	Parental exposure to gamma radiation causes progressively altered transcriptomes linked to adverse effects in zebrafish offspring	Environmental pollution (Barking, Essex : 1987)	2017	234	855-863
ZDB-PUB-171219-4	29246863	Xiong, S., Mei, J., Huang, P., Jing, J., Li, Z., Kang, J., Gui, J.F.	Essential roles of stat5.1/stat5b in controlling fish somatic growth	Journal of genetics and genomics = Yi chuan xue bao	2017	44(12)	577-585
ZDB-PUB-171222-11	29266316	So, J., Khaliq, M., Evason, K., Ninov, N., Martin, B.L., Stainier, D.Y.R., Shin, D.	Wnt/β-catenin signaling controls intrahepatic biliary network formation in zebrafish by regulating Notch activity	Hepatology (Baltimore, Md.)	2017	67(6)	2352-2366
ZDB-PUB-171223-6	29272338	Lee, S.L.J., Horsfield, J.A., Black, M.A., Rutherford, K., Gemmell, N.J.	Identification of sex differences in zebrafish (Danio rerio) brains during early sexual differentiation and masculinisation using 17α-methyltestoterone	Biology of reproduction	2017	99(2)	446-460
ZDB-PUB-171225-2	29274910	Wu, T.S., Lin, Y.T., Huang, Y.T., Cheng, Y.C., Yu, F.Y., Liu, B.H.	Disruption of liver development and coagulation pathway by ochratoxin A in embryonic zebrafish	Toxicology and applied pharmacology	2017	340	1-8
ZDB-PUB-180103-10	29293684	Vera, L.M., Bello, C., Paredes, J.F., Carmona-Antoñanzas, G., Sánchez-Vázquez, F.J.	Ethanol toxicity differs depending on the time of day	PLoS One	2018	13	e0190406
ZDB-PUB-180108-2	29306661	Rainieri, S., Conlledo, N., Larsen, B.K., Granby, K., Barranco, A.	Combined effects of microplastics and chemical contaminants on the organ toxicity of zebrafish (Danio rerio)	Environmental research	2018	162	135-143
ZDB-PUB-180113-14	29326336	Leong, W.Z., Tan, S.H., Ngoc, P.C.T., Amanda, S., Yam, A.W.Y., Liau, W.S., Gong, Z., Lawton, L.N., Tenen, D.G., Sanda, T.	ARID5B as a critical downstream target of the TAL1 complex that activates the oncogenic transcriptional program and promotes T-cell leukemogenesis	Genes & Development	2018	31(23-24)	2343-2360
ZDB-PUB-180122-2	29353058	Liu, Z.Z., Wang, Z.L., Choi, T.I., Huang, W.T., Wang, H.T., Han, Y.Y., Zhu, L.Y., Kim, H.T., Choi, J.H., Lee, J.S., Kim, H.G., Zhao, J., Chen, Y., Lu, Z., Tian, X.L., Pan, B.X., Li, B.M., Kim, C.H., Xu, H.	Chd7 Is Critical for Early T-Cell Development and Thymus Organogenesis in Zebrafish	The American journal of pathology	2018	188(4)	1043-1058
ZDB-PUB-180225-4	29476039	de Castro Assis, L.H., Nobrega, R.H., Gómez-González, N.E., Bogerd, J., Schulz, R.	Estrogen-induced inhibition of spermatogenesis in zebrafish is largely reversed by androgen	Journal of molecular endocrinology	2018	60(4)	273-284
ZDB-PUB-180303-8	29498212	Endlich, N., Kliewe, F., Kindt, F., Schmidt, K., Kotb, A.M., Artelt, N., Lindenmeyer, M.T., Cohen, C.D., Döring, F., Kuss, A.W., Amann, K., Moeller, M.J., Kabgani, N., Blumenthal, A., Endlich, K.	The transcription factor Dach1 is essential for podocyte function	Journal of Cellular and Molecular Medicine	2018	22(5)	2656-2669
ZDB-PUB-180327-18	29579206	Xiong, S., Ma, W., Jing, J., Zhang, J., Dan, C., Gui, J.F., Mei, J.	An miR-200 cluster on chromosome 23 regulates sperm motility in zebrafish	Endocrinology	2018	159(5)	1982-1991
ZDB-PUB-180327-4	29574160	Jia, J., Zhang, Y., Yuan, X., Qin, J., Yang, G., Yu, X., Wang, B., Sun, C., Li, W.	Reactive oxygen species participate in liver function recovery during compensatory growth in zebrafish (Danio rerio)	Biochemical and Biophysical Research Communications	2018	499(2)	285-290
ZDB-PUB-180328-6	29587208	Hou, L.P., Shu, H., Lin, L.L., Xu, S.Y., Wu, Y.X., Rong, X.J., Hu, J.J., Song, L.Y., Liang, Y.Q., Chen, H.X., Ying, G.G., Tian, C.E.	Modulation of transcription of genes related to the hypothalamic-pituitary-gonadal and the hypothalamic-pituitary-adrenal axes in zebrafish (Danio rerio) embryos/larvae by androstenedione	Ecotoxicology and environmental safety	2018	156	403-408
ZDB-PUB-180329-10	29590635	Myllymäki, H., Niskanen, M., Luukinen, H., Parikka, M., Rämet, M.	Identification of protective postexposure mycobacterial vaccine antigens using an immunosuppression-based reactivation model in the zebrafish	Disease models & mechanisms	2018	11(3)	
ZDB-PUB-180404-5	29610343	Sánchez-Iranzo, H., Galardi-Castilla, M., Sanz-Morejón, A., González-Rosa, J.M., Costa, R., Ernst, A., Sainz de Aja, J., Langa, X., Mercader, N.	Transient fibrosis resolves via fibroblast inactivation in the regenerating zebrafish heart	Proceedings of the National Academy of Sciences of the United States of America	2018	115(16)	4188-4193
ZDB-PUB-180407-3	29624168	Janjuha, S., Singh, S.P., Tsakmaki, A., Mousavy-Gharavy, N., Murawala, P., Konantz, J., Birke, S., Hodson, D.J., Rutter, G., Bewick, G., Ninov, N.N.	Age-related islet inflammation marks the proliferative decline of pancreatic beta-cells in zebrafish	eLIFE	2018	7	
ZDB-PUB-180408-3	29626799	Urbatzka, R., Freitas, S., Palmeira, A., Almeida, T., Moreira, J., Azevedo, C., Afonso, C., Correia-da-Silva, M., Sousa, E., Pinto, M., Vasconcelos, V.	Lipid reducing activity and toxicity profiles of a library of polyphenol derivatives	European Journal of Medicinal Chemistry	2018	151	272-284
ZDB-PUB-180418-11	29635430	Marvel, M., Spicer, O.S., Wong, T.T., Zmora, N., Zohar, Y.	Knockout of the Gnrh genes in zebrafish: effects on reproduction and potential compensation by reproductive and feeding-related neuropeptides	Biology of reproduction	2018	99(3)	565-577
ZDB-PUB-180418-33	29651289	Hsu, A.Y., Gurol, T., Sobreira, T.J.P., Zhang, S., Moore, N., Cai, C., Zhang, Z.Y., Deng, Q.	Development and Characterization of an Endotoxemia Model in Zebra Fish	Frontiers in immunology	2018	9	607
ZDB-PUB-180418-56	29659823	Jurynec, M.J., Sawitzke, A.D., Beals, T.C., Redd, M.J., Stevens, J., Otterud, B., Leppert, M.H., Grunwald, D.J.	A hyperactivating proinflammatory RIPK2 allele associated with early-onset osteoarthritis	Human molecular genetics	2018	27(13)	2383-2391
ZDB-PUB-180508-11	29727771	Frank, D.F., Miller, G.W., Harvey, D.J., Brander, S.M., Geist, J., Connon, R.E., Lein, P.J.	Bifenthrin causes transcriptomic alterations in mTOR and ryanodine receptor-dependent signaling and delayed hyperactivity in developing zebrafish (Danio rerio)	Aquatic toxicology (Amsterdam, Netherlands)	2018	200	50-61
ZDB-PUB-180526-11	29793103	Forner-Piquer, I., Santangeli, S., Maradonna, F., Rabbito, A., Piscitelli, F., Habibi, H.R., Di Marzo, V., Carnevali, O.	Disruption of the gonadal endocannabinoid system in zebrafish exposed to diisononyl phthalate	Environmental pollution (Barking, Essex : 1987)	2018	241	1-8
ZDB-PUB-180530-10	29800848	Xu, H., Liu, X., Jia, Y., Dong, F., Xu, J., Wu, X., Yang, Y., Zheng, Y.	Fipronil-induced toxic effects in zebrafish (Danio rerio) larvae by using digital gene expression profiling	The Science of the total environment	2018	639	550-559
ZDB-PUB-180606-14	29870789	Sarasquete, C., Úbeda-Manzanaro, M., Ortiz-Delgado, J.B.	Toxicity and non-harmful effects of the soya isoflavones, genistein and daidzein, in embryos of the zebrafish, Danio rerio	Comparative biochemistry and physiology. Toxicology & pharmacology : CBP	2018	211	57-67
ZDB-PUB-180609-2	29874752	Crago, J., Klaper, R.	Place-based screening of mixtures of dominant emerging contaminants measured in Lake Michigan using zebrafish embryo gene expression assay	Chemosphere	2018	193	1226-1234
ZDB-PUB-180609-30	29883909	Deng, S., Jia, P.P., Zhang, J.H., Junaid, M., Niu, A., Ma, Y.B., Fu, A., Pei, D.S.	Transcriptomic response and perturbation of toxicity pathways in zebrafish larvae after exposure to graphene quantum dots (GQDs)	Journal of hazardous materials	2018	357	146-158
ZDB-PUB-180622-16	29914374	Pinto, R.A., Almeida-Santos, J., Lourenço, R., Saúde, L.	Identification of Dmrt2a downstream genes during zebrafish early development using a timely controlled approach	BMC Developmental Biology	2018	18	14
ZDB-PUB-180627-15	29945206	Li, J., Niu, C., Cheng, C.H.K.	Igf3 serves as a mediator of LH in zebrafish ovulation	Biology of reproduction	2018	99(6)	1235-1243
ZDB-PUB-180703-2	29961393	Hehr, C.L., Halabi, R., McFarlane, S.	Polarity and morphogenesis of the eye epithelium requires the adhesion junction associated adaptor protein Traf4	Cell adhesion & migration	2018	12(5)	489-502
ZDB-PUB-180717-2	30009777	Ernens, I., Lumley, A.I., Devaux, Y.	Restoration of cardiac function after anaemia-induced heart failure in zebrafish	Journal of Molecular and Cellular Cardiology	2018	121	223-232
ZDB-PUB-180718-9	30016370	Phan, Q.T., Sipka, T., Gonzalez, C., Levraud, J.P., Lutfalla, G., Nguyen-Chi, M.	Neutrophils use superoxide to control bacterial infection at a distance	PLoS pathogens	2018	14	e1007157
ZDB-PUB-180726-5	30044200	Sopezki, M.D.S., Monserrat, J.M., Yunes, J.S., Zanette, J.	Validation of Housekeeping Genes as Internal Controls for the Study of the Effects of Microcystin-LR in Zebrafish by Real-Time PCR	Zebrafish	2018	15(5)	454-459
ZDB-PUB-180801-13	30063756	Jensen, H.M., Korbut, R., Kania, P.W., Buchmann, K.	Cannabidiol effects on behaviour and immune gene expression in zebrafish (Danio rerio)	PLoS One	2018	13	e0200016
ZDB-PUB-180803-10	30071346	Fernandes, S.F., Fior, R., Pinto, F., Gama-Carvalho, M., Saúde, L.	Fine-tuning of fgf8a expression through alternative polyadenylation has a selective impact on Fgf-associated developmental processes	Biochimica et biophysica acta	2018		
ZDB-PUB-180808-6	30082271	Hu, B., Gao, Y., Davies, L., Woo, S., Topczewski, J., Jessen, J.R., Lin, F.	Glypican 4 and Mmp14 interact in regulating the migration of anterior endodermal cells by limiting extracellular matrix deposition	Development (Cambridge, England)	2018	145(17)	
ZDB-PUB-180824-2	30135188	Sun, J., Yan, L., Shen, W., Meng, A.	Maternal Ybx1 safeguards zebrafish oocyte maturation and maternal-to-zygotic transition by repressing global translation	Development (Cambridge, England)	2018	145(19)	
ZDB-PUB-180913-18	30204772	Jørgensen, L.V.G., Korbut, R., Jeberg, S., Kania, P.W., Buchmann, K.	Association between adaptive immunity and neutrophil dynamics in zebrafish (Danio rerio) infected by a parasitic ciliate	PLoS One	2018	13	e0203297
ZDB-PUB-180913-28	30208064	Bickers, C., Española, S.D., Grainger, S., Pouget, C., Traver, D.	Zebrafish snai2 mutants fail to phenocopy morphant phenotypes	PLoS One	2018	13	e0202747
ZDB-PUB-180924-5	30244429	Yang, Z., Chen, S., Xue, S., Li, X., Sun, Z., Yang, Y., Hu, X., Geng, T., Cui, H.	Generation of Cas9 transgenic zebrafish and their application in establishing an ERV-deficient animal model	Biotechnology Letters	2018	40(11-12)	1507-1518
ZDB-PUB-180925-6	30245344	Meyer-Alert, H., Ladermann, K., Larsson, M., Schiwy, S., Hollert, H., Keiter, S.H.	A temporal high-resolution investigation of the Ah-receptor pathway during early development of zebrafish (Danio rerio)	Aquatic toxicology (Amsterdam, Netherlands)	2018	204	117-129
ZDB-PUB-181004-8	30281784	Fujino, Y., Yamada, K., Sugaya, C., Ooka, Y., Ovara, H., Ban, H., Akama, K., Otosaka, S., Kinoshita, H., Yamasu, K., Mishima, Y., Kawamura, A.	Deadenylation by the CCR4-NOT complex contributes to the turnover of hairy-related mRNAs in the zebrafish segmentation clock	FEBS letters	2018	592(20)	3388-3398
ZDB-PUB-181006-2	30287385	Clément, A., Blanco-Sánchez, B., Peirce, J.L., Westerfield, M.	Cog4 is required for protrusion and extension of the epithelium in the developing semicircular canals	Mechanisms of Development	2018	155	1-7
ZDB-PUB-181010-4	30300574	Shimizu, N., Matsuda, M.	Identification of a Novel Zebrafish Mutant Line that Develops Testicular Germ Cell Tumors	Zebrafish	2018	16(1)	15-28
ZDB-PUB-181020-18	30336314	Pan, Y.X., Zhuo, M.Q., Li, D.D., Xu, Y.H., Wu, K., Luo, Z.	SREBP-1 and LXR&#x3b1; pathways mediated Cu-induced hepatic lipid metabolism in zebrafish Danio rerio	Chemosphere	2018	215	370-379
ZDB-PUB-181020-21	30336646	Elbialy, A., Asakawa, S., Watabe, S., Kinoshita, S.	A Zebrafish Acromegaly Model Elevates DNA Damage and Impairs DNA Repair Pathways	Biology	2018	7(4)	
ZDB-PUB-181024-2	30348863	Cox, A.G., Tsomides, A., Yimlamai, D., Hwang, K.L., Miesfeld, J., Galli, G.G., Fowl, B.H., Fort, M., Ma, K.Y., Sullivan, M.R., Hosios, A.M., Snay, E., Yuan, M., Brown, K.K., Lien, E.C., Chhangawala, S., Steinhauser, M.L., Asara, J.M., Houvras, Y., Link, B., Vander Heiden, M.G., Camargo, F.D., Goessling, W.	Yap regulates glucose utilization and sustains nucleotide synthesis to enable organ growth	The EMBO journal	2018	37(22)	
ZDB-PUB-181026-3	30352990	Liu, T., Shi, Y., Chan, M.T.V., Peng, G., Zhang, Q., Sun, X., Zhu, Z., Xie, Y., Sham, K.W.Y., Li, J., Liu, X., Ho, I.H.T., Gin, T., Lu, Z., Wu, W.K.K., Cheng, C.H.K.	Developmental protein kinase C hyper-activation results in microcephaly and behavioral abnormalities in zebrafish	Translational psychiatry	2018	8	232
ZDB-PUB-181027-15	30366104	Lutte, A.H., Nazario, L.R., Majolo, J.H., Pereira, T.C.B., Altenhofen, S., da Silva Dadda, A., Bogo, M.R., Da Silva, R.S.	Persistent increase in ecto&#x2011;5'&#x2011;nucleotidase activity from encephala of adult zebrafish exposed to ethanol during early development	Neurotoxicology and teratology	2018	70	60-66
ZDB-PUB-181101-9	30380418	Blanco-Sánchez, B., Clément, A., Fierro, J., Stednitz, S., Phillips, J.B., Wegner, J., Panlilio, J.M., Peirce, J.L., Washbourne, P., Westerfield, M.	Grxcr1 Promotes Hair Bundle Development by Destabilizing the Physical Interaction between Harmonin and Sans Usher Syndrome Proteins	Cell Reports	2018	25	1281-1291.e4
ZDB-PUB-181114-1	30413070	Liu, L., Zhu, H., Yan, Y., Lv, P., Wu, W.	Toxicity Evaluation and Biomarker Selection with Validated Reference Gene in Embryonic Zebrafish Exposed to Mitoxantrone	International Journal of Molecular Sciences	2018	19(11)	
ZDB-PUB-181114-15	30417250	Arjona, F.J., Latta, F., Mohammed, S.G., Thomassen, M., van Wijk, E., Bindels, R.J.M., Hoenderop, J.G.J., de Baaij, J.H.F.	SLC41A1 is essential for magnesium homeostasis in vivo	Pflugers Archiv : European journal of physiology	2018	471(6)	845-860
ZDB-PUB-181114-26	30420850	López Nadal, A., Peggs, D., Wiegertjes, G.F., Brugman, S.	Exposure to Antibiotics Affects Saponin Immersion-Induced Immune Stimulation and Shift in Microbial Composition in Zebrafish Larvae	Frontiers in microbiology	2018	9	2588
ZDB-PUB-181118-14	30446505	Hernández, P.P., Strzelecka, P.M., Athanasiadis, E.I., Hall, D., Robalo, A.F., Collins, C.M., Boudinot, P., Levraud, J.P., Cvejic, A.	Single-cell transcriptional analysis reveals ILC-like cells in zebrafish	Science immunology	2018	3(29)	
ZDB-PUB-181127-2	30449506	Anbalagan, S., Gordon, L., Blechman, J., Matsuoka, R.L., Rajamannar, P., Wircer, E., Biran, J., Reuveny, A., Leshkowitz, D., Stainier, D.Y.R., Levkowitz, G.	Pituicyte Cues Regulate the Development of Permeable Neuro-Vascular Interfaces	Developmental Cell	2018	47(6)	711-726.e5
ZDB-PUB-181127-50	30466059	Wu, T.S., Cheng, Y.C., Chen, P.J., Huang, Y.T., Yu, F.Y., Liu, B.H.	Exposure to aflatoxin B<sub>1</sub> interferes with locomotion and neural development in zebrafish embryos and larvae	Chemosphere	2018	217	905-913
ZDB-PUB-181207-28	30521410	Lorincz, R., Emfinger, C.H., Walcher, A., Giolai, M., Krautgasser, C., Remedi, M.S., Nichols, C.G., Meyer, D.	In vivo monitoring of intracellular Ca<sup>2+</sup> dynamics in the pancreatic &#x3b2;-cells of zebrafish embryos	Islets	2018	10(6)	221-238
ZDB-PUB-181215-18	30547092	Van Gennip, J.L.M., Boswell, C.W., Ciruna, B.	Neuroinflammatory signals drive spinal curve formation in zebrafish models of idiopathic scoliosis	Science advances	2018	4	eaav1781
ZDB-PUB-181215-6	30541770	Ton, Q.V., Leino, D., Mowery, S.A., Bredemeier, N.O., Lafontant, P.J., Lubert, A., Gurung, S., Farlow, J.L., Foroud, T.M., Broderick, J., Sumanas, S.	Collagen COL22A1 maintains vascular stability and mutations in <i>COL22A1</i> are potentially associated with intracranial aneurysms	Disease models & mechanisms	2018	11(12)	
ZDB-PUB-181220-12	30566853	Di Giaimo, R., Durovic, T., Barquin, P., Kociaj, A., Lepko, T., Aschenbroich, S., Breunig, C.T., Irmler, M., Cernilogar, F.M., Schotta, G., Barbosa, J.S., Trümbach, D., Baumgart, E.V., Neuner, A.M., Beckers, J., Wurst, W., Stricker, S.H., Ninkovic, J.	The Aryl Hydrocarbon Receptor Pathway Defines the Time Frame for Restorative Neurogenesis	Cell Reports	2018	25	3241-3251.e5
ZDB-PUB-181220-13	30566854	Saju, J.M., Hossain, M.S., Liew, W.C., Pradhan, A., Thevasagayam, N.M., Tan, L.S.E., Anand, A., Olsson, P.E., Orbán, L.	Heat Shock Factor 5 Is Essential for Spermatogenesis in Zebrafish	Cell Reports	2018	25	3252-3261.e4
ZDB-PUB-181224-20	30579210	Liu, H., Wang, X., Wu, Y., Hou, J., Zhang, S., Zhou, N., Wang, X.	Toxicity responses of different organs of zebrafish (Danio rerio) to silver nanoparticles with different particle sizes and surface coatings	Environmental pollution (Barking, Essex : 1987)	2018	246	414-422
ZDB-PUB-190104-5	30605867	Alfonso, S., Blanc, M., Joassard, L., Keiter, S.H., Munschy, C., Loizeau, V., Bégout, M.L., Cousin, X.	Examining multi- and transgenerational behavioral and molecular alterations resulting from parental exposure to an environmental PCB and PBDE mixture	Aquatic toxicology (Amsterdam, Netherlands)	2018	208	29-38
ZDB-PUB-190108-8	30615194	Lu, D.L., Ma, Q., Wang, J., Li, L.Y., Han, S.L., Limbu, S.M., Li, D.L., Chen, L.Q., Zhang, M.L., Du, Z.Y.	Fasting enhances cold resistance in fish through stimulating lipid catabolism and autophagy	The Journal of physiology	2019	597(6)	1585-1603
ZDB-PUB-190119-2	30656567	Shi, Y., Duan, X., Xu, G., Wang, X., Wei, G., Dong, S., Xie, G., Liu, D.	A ribosomal DNA-hosted microRNA regulates zebrafish embryonic angiogenesis	Angiogenesis	2019	22(2)	211-221
ZDB-PUB-190204-6	30711760	Costa, K.M., Pereira, T.C.B., Valente, C.A., Pissinate, K., Soares, J.C., Cruz, F.F., Corte, T.W.F., Machado, P., Basso, N.R.S., Bogo, M.R.	Adverse effects of p-TSA-doped polypyrrole particulate exposure during zebrafish (Danio rerio) development	Colloids and surfaces. B, Biointerfaces	2019	177	58-67
ZDB-PUB-190206-7	30718621	Huang, V., Butler, A.A., Lubin, F.D.	Telencephalon transcriptome analysis of chronically stressed adult zebrafish	Scientific Reports	2019	9	1379
ZDB-PUB-190209-14	30733682	Opazo, R., Plaza-Parrochia, F., Cardoso Dos Santos, G.R., Carneiro, G.R.A., Sardela, V.F., Romero, J., Valladares, L.	Fasting Upregulates <i>npy, agrp</i>, and <i>ghsr</i> Without Increasing Ghrelin Levels in Zebrafish (<i>Danio rerio</i>) Larvae	Frontiers in Physiology	2019	9	1901
ZDB-PUB-190215-8	30760708	Savage, A.M., Kurusamy, S., Chen, Y., Jiang, Z., Chhabria, K., MacDonald, R.B., Kim, H.R., Wilson, H.L., van Eeden, F.J.M., Armesilla, A.L., Chico, T.J.A., Wilkinson, R.N.	tmem33 is essential for VEGF-mediated endothelial calcium oscillations and angiogenesis	Nature communications	2019	10	732
ZDB-PUB-190308-16	30843204	Rastegar, S., Parimisetty, A., Cassam-Sulliman, N., Narra Sai, S., Weber, S., Rastegar, M., Viranaicken, W., Couret, D., Planesse, C., Strähle, U., Meilhac, O., Lefebvre d'Hellencourt, C., Diotel, N.	Expression of adiponectin receptors in the brain of adult zebrafish and mouse: Links with neurogenic niches and brain repair	The Journal of comparative neurology	2019	527(14)	2317-2333
ZDB-PUB-190308-22	30845179	Murdoch, C.C., Espenschied, S.T., Matty, M.A., Mueller, O., Tobin, D.M., Rawls, J.F.	Intestinal Serum amyloid A suppresses systemic neutrophil activation and bactericidal activity in response to microbiota colonization	PLoS pathogens	2019	15	e1007381
ZDB-PUB-190308-6	30837568	Sharma, D., Sehgal, P., Mathew, S., Vellarikkal, S.K., Singh, A.R., Kapoor, S., Jayarajan, R., Scaria, V., Sivasubbu, S.	A genome-wide map of circular RNAs in adult zebrafish	Scientific Reports	2019	9	3432
ZDB-PUB-190308-7	30837605	Toselli, C.M., Wilkinson, B.M., Paterson, J., Kieffer, T.J.	Vegfa/vegfr2 signaling is necessary for zebrafish islet vessel development, but is dispensable for beta-cell and alpha-cell formation	Scientific Reports	2019	9	3594
ZDB-PUB-190312-2	30851936	Zhao, L., Tan, J., Li, D., Jiang, L., Li, T., Yang, Y., Wang, G., Shang, Z., Wang, J., Zhou, J.	SLC39A6/ZIP6 is essential for zinc homeostasis and T-cell development in zebrafish	Biochemical and Biophysical Research Communications	2019	511(4)	896-902
ZDB-PUB-190312-4	30853418	Bruning, J.M., Wang, Y., Oltrabella, F., Tian, B., Kholodar, S.A., Liu, H., Bhattacharya, P., Guo, S., Holton, J.M., Fletterick, R.J., Jacobson, M.P., England, P.M.	Covalent Modification and Regulation of the Nuclear Receptor Nurr1 by a Dopamine Metabolite	Cell chemical biology	2019	26(5)	674-685.e6
ZDB-PUB-190318-2	30878645	Black, H.D., Xu, W., Hortle, E., Roberston, S.I., Britton, W.J., Kaur, A., New, E.J., Witting, P.K., Chami, B., Oehlers, S.H.	The cyclic nitroxide antioxidant 4-methoxy-TEMPO decreases mycobacterial burden in vivo through host and bacterial targets	Free radical biology & medicine	2019	135	157-166
ZDB-PUB-190322-4	30894119	Loontiens, S., Depestel, L., Vanhauwaert, S., Dewyn, G., Gistelinck, C., Verboom, K., Van Loocke, W., Matthijssens, F., Willaert, A., Vandesompele, J., Speleman, F., Durinck, K.	Purification of high-quality RNA from a small number of fluorescence activated cell sorted zebrafish cells for RNA sequencing purposes	BMC Genomics	2019	20	228
ZDB-PUB-190326-10	30906313	Olsvik, P.A., Whatmore, P., Penglase, S.J., Skjærven, K.H., Anglès d'Auriac, M., Ellingsen, S.	Associations Between Behavioral Effects of Bisphenol A and DNA Methylation in Zebrafish Embryos	Frontiers in genetics	2019	10	184
ZDB-PUB-190405-19	30945804	Valdivieso, A., Ribas, L., Piferrer, F.	Ovarian transcriptomic signatures of zebrafish females resistant to different environmental perturbations	Journal of experimental zoology. Part B, Molecular and developmental evolution	2019	332(3-4)	55-68
ZDB-PUB-190406-19	30951724	Marvel, M.M., Spicer, O.S., Wong, T.T., Zmora, N., Zohar, Y.	Knockout of Gnrh2 in zebrafish (Danio rerio) reveals its roles in regulating feeding behavior and oocyte quality	General and comparative endocrinology	2019	280	15-23
ZDB-PUB-190411-2	30965663	Jarque, S., Ibarra, J., Rubio-Brotons, M., García-Fernández, J., Terriente, J.	Multiplex Analysis Platform for Endocrine Disruption Prediction Using Zebrafish	International Journal of Molecular Sciences	2019	20(7)	
ZDB-PUB-190425-6	31014480	Baek, S., Oh, T.G., Secker, G., Sutton, D.L., Okuda, K.S., Paterson, S., Bower, N.I., Toubia, J., Koltowska, K., Capon, S.J., Baillie, G.J., Simons, C., Muscat, G.E.O., Lagendijk, A.K., Smith, K.A., Harvey, N.L., Hogan, B.M.	The Alternative Splicing Regulator Nova2 Constrains Vascular Erk Signaling to Limit Specification of the Lymphatic Lineage	Developmental Cell	2019	49	279-292.e5
ZDB-PUB-190507-14	31048017	Liu, M., Ai, W., Sun, L., Fang, F., Wang, X., Chen, S., Wang, H.	Triclosan-induced liver injury in zebrafish (Danio rerio) via regulating MAPK/p53 signaling pathway	Comparative biochemistry and physiology. Toxicology & pharmacology : CBP	2019	222	108-117
ZDB-PUB-190529-3	31136010	He, J., Chen, J., Wei, X., Leng, H., Mu, H., Cai, P., Luo, L.	mTORC1 Signaling is Required for the Dedifferentiation from Biliary Cell to Bi-potential Progenitor Cell in Zebrafish Liver Regeneration	Hepatology (Baltimore, Md.)	2019	70(6)	2092-2106
ZDB-PUB-190608-4	31170402	Li, J., Wang, Y., Kang, T., Li, X., Niu, C.	Insulin-like growth factor binding proteins inhibit oocyte maturation of zebrafish	General and comparative endocrinology	2019	281	83-90
ZDB-PUB-190617-1	31202720	London, S., Volkoff, H.	Effects of fasting on the central expression of appetite-regulating and reproductive hormones in wild-type and Casper zebrafish (Danio rerio)	General and comparative endocrinology	2019	282	113207
ZDB-PUB-190627-13	31238190	Granadeiro, L., Dirks, R.P., Ortiz-Delgado, J.B., Gavaia, P.J., Sarasquete, C., Laizé, V., Cancela, M.L., Fernández, I.	Warfarin-exposed zebrafish embryos resembles human warfarin embryopathy in a dose and developmental-time dependent manner - From molecular mechanisms to environmental concerns	Ecotoxicology and environmental safety	2019	181	559-571
ZDB-PUB-190701-23	31254851	Peng, X., Sun, X., Yu, M., Fu, W., Chen, H., Chen, J.	Chronic exposure to environmental concentrations of phenanthrene impairs zebrafish reproduction	Ecotoxicology and environmental safety	2019	182	109376
ZDB-PUB-190701-29	31255755	Gong, G., Kam, H., Tse, Y., Lee, S.M.	Cardiotoxicity of forchlorfenuron (CPPU) in zebrafish (Danio rerio) and H9c2 cardiomyocytes	Chemosphere	2019	235	153-162
ZDB-PUB-190705-8	31271837	Ji, C., Guo, X., Dong, X., Ren, J., Zu, Y., Li, W., Zhang, Q.	Notch1a can widely mediate innate immune responses in zebrafish larvae infected with Vibrio parahaemolyticus	Fish & shellfish immunology	2019	92	680-689
ZDB-PUB-190724-10	31323329	Yi, C.C., Liu, C.H., Chuang, K.P., Chang, Y.T., Hu, S.Y.	A potential probiotic Chromobacterium aquaticum with bacteriocin-like activity enhances the expression of indicator genes associated with nutrient metabolism, growth performance and innate immunity against pathogen infections in zebrafish (Danio rerio)	Fish & shellfish immunology	2019	93	124-134
ZDB-PUB-190724-12	31324766	Adeyemo, A.A., Zaghloul, N.A., Chen, G., Doumatey, A.P., Leitch, C.C., Hostelley, T.L., Nesmith, J.E., Zhou, J., Bentley, A.R., Shriner, D., Fasanmade, O., Okafor, G., Eghan, B., Agyenim-Boateng, K., Chandrasekharappa, S., Adeleye, J., Balogun, W., Owusu, S., Amoah, A., Acheampong, J., Johnson, T., Oli, J., Adebamowo, C., South Africa Zulu Type 2 Diabetes Case-Control Study, Collins, F., Dunston, G., Rotimi, C.N.	ZRANB3 is an African-specific type 2 diabetes locus associated with beta-cell mass and insulin response	Nature communications	2019	10	3195
ZDB-PUB-190724-7	31322700	Oakes, J.A., Li, N., Wistow, B.R.C., Griffin, A., Barnard, L., Storbeck, K.H., Cunliffe, V.T., Krone, N.P.	Ferredoxin 1b deficiency leads to testis disorganization, impaired spermatogenesis and feminization in zebrafish	Endocrinology	2019	160(10)	2401-2416
ZDB-PUB-190809-3	31391308	Espenschied, S.T., Cronan, M.R., Matty, M.A., Mueller, O., Redinbo, M.R., Tobin, D.M., Rawls, J.F.	Epithelial delamination is protective during pharmaceutical-induced enteropathy	Proceedings of the National Academy of Sciences of the United States of America	2019	116(34)	16961-16970
ZDB-PUB-190810-3	31395869	Bonkhofer, F., Rispoli, R., Pinheiro, P., Krecsmarik, M., Schneider-Swales, J., Tsang, I.H.C., de Bruijn, M., Monteiro, R., Peterkin, T., Patient, R.	Blood stem cell-forming haemogenic endothelium in zebrafish derives from arterial endothelium	Nature communications	2019	10	3577
ZDB-PUB-190814-6	31404503	Collodet, C., Foretz, M., Deak, M., Bultot, L., Metairon, S., Viollet, B., Lefebvre, G., Raymond, F., Parisi, A., Civiletto, G., Gut, P., Descombes, P., Sakamoto, K.	AMPK promotes induction of the tumor suppressor FLCN through activation of TFEB independently of mTOR	FASEB journal : official publication of the Federation of American Societies for Experimental Biology	2019	33(11)	12374-12391
ZDB-PUB-190910-13	31499145	Bernardo, H.T., Agostini, J.F., Toé, H.C.Z.D., Vieira, K.M., Baldin, S.L., Schuck, P.F., Uribe-Cruz, C., Longo, L., da Silveira, T.R., Rosemberg, D.B., Rico, E.P.	Cholinergic system and exploratory behavior are changed after weekly-binge ethanol exposure in zebrafish	Pharmacology, biochemistry, and behavior	2019	186	172790
ZDB-PUB-190917-4	30705153	Gu, Q., Yang, X., Lv, J., Zhang, J., Xia, B., Kim, J.D., Wang, R., Xiong, F., Meng, S., Clements, T.P., Tandon, B., Wagner, D.S., Diaz, M.F., Wenzel, P.L., Miller, Y.I., Traver, D., Cooke, J.P., Li, W., Zon, L.I., Chen, K., Bai, Y., Fang, L.	AIBP-mediated cholesterol efflux instructs hematopoietic stem and progenitor cell fate	Science (New York, N.Y.)	2019	363	1085-1088
ZDB-PUB-190921-1	31537465	Reichert, S., Pavón Arocas, O., Rihel, J.	The Neuropeptide Galanin Is Required for Homeostatic Rebound Sleep following Increased Neuronal Activity	Neuron	2019	104(2)	370-384.e5
ZDB-PUB-190925-7	31547905	Dóró, É., Jacobs, S.H., Hammond, F.R., Schipper, H., Pieters, R.P., Carrington, M., Wiegertjes, G.F., Forlenza, M.	Visualizing trypanosomes in a vertebrate host reveals novel swimming behaviours, adaptations and attachment mechanisms	eLIFE	2019	8	
ZDB-PUB-191004-3	31578390	Kobayashi, I., Kondo, M., Yamamori, S., Kobayashi-Sun, J., Taniguchi, M., Kanemaru, K., Katakura, F., Traver, D.	Enrichment of hematopoietic stem/progenitor cells in the zebrafish kidney	Scientific Reports	2019	9	14205
ZDB-PUB-191005-6	31582762	Imle, R., Wang, B.T., Stützenberger, N., Birkenhagen, J., Tandon, A., Carl, M., Himmelreich, N., Thiel, C., Gröne, H.J., Poschet, G., Völkers, M., Gülow, K., Schröder, A., Carillo, S., Mittermayr, S., Bones, J., Kamiński, M.M., Kölker, S., Sauer, S.W.	ADP-dependent glucokinase regulates energy metabolism via ER-localized glucose sensing	Scientific Reports	2019	9	14248
ZDB-PUB-191011-22	31597660	Crespo, D., Assis, L.H.C., van de Kant, H.J.G., de Waard, S., Safian, D., Lemos, M.S., Bogerd, J., Schulz, R.W.	Endocrine and local signaling interact to regulate spermatogenesis in zebrafish: Follicle-stimulating hormone, retinoic acid and androgens	Development (Cambridge, England)	2019	146(21)	
ZDB-PUB-191011-30	31600720	Crespo, D., Lemos, M.S., Zhang, Y.T., Safian, D., Norberg, B., Bogerd, J., Schulz, R.	PGE2 inhibits spermatogonia differentiation in zebrafish: interaction with Fsh and an androgen	The Journal of endocrinology	2019	244(1)	163-175
ZDB-PUB-191102-12	31669374	Li, B., Li, S., He, Q., Du, S.	Generation of MuRF-GFP transgenic zebrafish models for investigating murf gene expression and protein localization in Smyd1b and Hsp90&#x3b1;1 knockdown embryos	Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology	2019	240	110368
ZDB-PUB-191108-25	31693487	Li, N., Oakes, J.A., Storbeck, K., Cunliffe, V.T., Krone, N.	The P450 side chain cleavage enzyme Cyp11a2 facilitates steroidogenesis in zebrafish	The Journal of endocrinology	2019	244(2)	309-321
ZDB-PUB-191110-3	31699484	Jin, H., Ji, C., Ren, F., Aniagu, S., Tong, J., Jiang, Y., Chen, T.	AHR-mediated oxidative stress contributes to the cardiac developmental toxicity of trichloroethylene in zebrafish embryos	Journal of hazardous materials	2019	385	121521
ZDB-PUB-191213-16	31830605	Fu, J., Tan, Y.X.R., Gong, Z., Bae, S.	The toxic effect of triclosan and methyl-triclosan on biological pathways revealed by metabolomics and gene expression in zebrafish embryos	Ecotoxicology and environmental safety	2019	189	110039
ZDB-PUB-191220-3	31852685	Kobayashi, I., Kobayashi-Sun, J., Hirakawa, Y., Ouchi, M., Yasuda, K., Kamei, H., Fukuhara, S., Yamaguchi, M.	Dual role of Jam3b in early hematopoietic and vascular development	Development (Cambridge, England)	2019	147(1)	
ZDB-PUB-200118-22	31950975	Idigo, N.J., Soares, D.C., Abbott, C.M.	Translation elongation factor 1A2 (eEF1A2) is encoded by one of four eef1a genes and is dispensable for survival in zebrafish	Bioscience Reports	2020	40(1)	
ZDB-PUB-200214-6	32051014	den Broeder, M.J., Ballangby, J., Kamminga, L.M., Aleström, P., Legler, J., Lindeman, L.C., Kamstra, J.H.	Inhibition of methyltransferase activity of enhancer of zeste 2 leads to enhanced lipid accumulation and altered chromatin status in zebrafish	Epigenetics & chromatin	2020	13	5
ZDB-PUB-200216-13	32060586	Ling, Y., Sun, L., Wang, D., Jiang, J., Sun, W., Ai, W., Wang, X., Wang, H.	Triclosan induces zebrafish neurotoxicity by abnormal expression of miR-219 targeting oligodendrocyte differentiation of central nervous system	Archives of toxicology	2020	94(3)	857-871
ZDB-PUB-200216-4	32054973	Dobrzycki, T., Mahony, C.B., Krecsmarik, M., Koyunlar, C., Rispoli, R., Peulen-Zink, J., Gussinklo, K., Fedlaoui, B., de Pater, E., Patient, R., Monteiro, R.	Deletion of a conserved Gata2 enhancer impairs haemogenic endothelium programming and adult Zebrafish haematopoiesis	Communications biology	2020	3	71
ZDB-PUB-200229-18	32109521	Diaz, O.E., Xue, S., Luo, X., Nava, J., Appelblom, A., Morales, R.A., Das, S., Villablanca, E.J.	Retinoic acid induced cytokines are selectively modulated by Liver X Receptor activation in zebrafish	Reproductive toxicology (Elmsford, N.Y.)	2020	93	163-168
ZDB-PUB-200403-189	32213369	Hou, L., Chen, S., Shi, W., Chen, H., Liang, Y., Wang, X., Tan, J., Wang, Y., Deng, X., Zhan, M., Long, J., Cai, G., Luo, S., Zhang, C., Liu, J., Leung, J.Y.S., Xie, L.	Norethindrone alters mating behaviors, ovary histology, hormone production and transcriptional expression of steroidogenic genes in zebrafish (Danio rerio)	Ecotoxicology and environmental safety	2020	195	110496
ZDB-PUB-200422-109	32285982	Liu, Z.F., Ji, J.F., Jiang, X.F., Shao, T., Fan, D.D., Jiang, X.H., Lin, A.F., Xiang, L.X., Shao, J.Z.	Characterization of cGAS homologs in innate and adaptive mucosal immunities in zebrafish gives evolutionary insights into cGAS-STING pathway	FASEB journal : official publication of the Federation of American Societies for Experimental Biology	2020	34(6)	7786-7809
ZDB-PUB-200422-142	32298450	Barnhill, L.M., Khuansuwan, S., Juarez, D., Murata, H., Araujo, J.A., Bronstein, J.M.	Diesel exhaust extract exposure induces neuronal toxicity by disrupting autophagy	Toxicological sciences : an official journal of the Society of Toxicology	2020	176(1)	193-202
ZDB-PUB-200504-2	32359472	Badrock, A.P., Uggenti, C., Wacheul, L., Crilly, S., Jenkinson, E.M., Rice, G.I., Kasher, P.R., Lafontaine, D.L.J., Crow, Y.J., O'Keefe, R.T.	Analysis of U8 snoRNA Variants in Zebrafish Reveals How Bi-allelic Variants Cause Leukoencephalopathy with Calcifications and Cysts	American journal of human genetics	2020	106(5)	694-706
ZDB-PUB-200609-1	32505743	Zhao, X., Lorent, K., Escobar-Zarate, D., Rajagopalan, R., Loomes, K.M., Gillespie, K., Mesaros, C., Estrada, M.A., Blair, I., Winkler, J.D., Spinner, N.B., Devoto, M., Pack, M.	Impaired redox and protein homeostasis as risk factors and therapeutic targets in toxin-induced biliary atresia	Gastroenterology	2020	159(3)	1068-1084.e2
ZDB-PUB-200611-1	32517017	Nayak, S., Al Ashhab, A., Zilberg, D., Khozin-Goldberg, I.	Dietary Supplementation with Omega-6 LC-PUFA-Rich Microalgae Regulates Mucosal Immune Response and Promotes Microbial Diversity in the Zebrafish Gut	Biology	2020	9(6)	
ZDB-PUB-200612-15	32526283	Mojzesz, M., Klak, K., Wojtal, P., Adamek, M., Podlasz, P., Chmielewska-Krzesinska, M., Matras, M., Reichert, M., Chadzinska, M., Rakus, K.	Viral infection-induced changes in the expression profile of non-RLR DExD/H-box RNA helicases (DDX1, DDX3, DHX9, DDX21 and DHX36) in zebrafish and common carp	Fish & shellfish immunology	2020	104	62-73
ZDB-PUB-200626-10	32583440	Wong, C.E.D., Hua, K., Monis, S., Saxena, V., Norazit, A., Noor, S.M., Ekker, M.	Gdnf affects early diencephalic dopaminergic neuron development through regulation of differentiation-associated transcription factors in zebrafish	Journal of neurochemistry	2020	156(4)	481-498
ZDB-PUB-200701-16	32601179	Tao, T., Shi, H., Mariani, L., Abraham, B.J., Durbin, A.D., Zimmerman, M.W., Powers, J.T., Missios, P., Ross, K.N., Perez-Atayde, A.R., Bulyk, M.L., Young, R.A., Daley, G.Q., Look, A.T.	LIN28B regulates transcription and potentiates MYCN-induced neuroblastoma through binding to ZNF143 at target gene promotors	Proceedings of the National Academy of Sciences of the United States of America	2020	117(28)	16516-16526
ZDB-PUB-200702-2	32604890	Dubińska-Magiera, M., Niedbalska-Tarnowska, J., Migocka-Patrzałek, M., Posyniak, E., Daczewska, M.	Characterization of Hspb8 in Zebrafish	Cells	2020	9(6)	
ZDB-PUB-200710-27	32645607	Volz, S.N., Hausen, J., Nachev, M., Ottermanns, R., Schiwy, S., Hollert, H.	Short exposure to cadmium disrupts the olfactory system of zebrafish (Danio rerio) - Relating altered gene expression in the olfactory organ to behavioral deficits	Aquatic toxicology (Amsterdam, Netherlands)	2020	226	105555
ZDB-PUB-200717-10	32671088	Ikeda-Ohtsubo, W., López Nadal, A., Zaccaria, E., Iha, M., Kitazawa, H., Kleerebezem, M., Brugman, S.	Intestinal Microbiota and Immune Modulation in Zebrafish by Fucoidan From Okinawa Mozuku (<i>Cladosiphon okamuranus</i>)	Frontiers in nutrition	2020	7	67
ZDB-PUB-200717-9	32670800	Kwok, M.L., Chan, K.M.	Oxidative stress and apoptotic effects of copper and cadmium in the zebrafish liver cell line ZFL	Toxicology reports	2020	7	822-835
ZDB-PUB-200719-10	32678226	Ong, S.L.M., de Vos, I.J.H.M., Meroshini, M., Poobalan, Y., Dunn, N.R.	Microfibril-associated glycoprotein 4 (Mfap4) regulates haematopoiesis in zebrafish	Scientific Reports	2020	10	11801
ZDB-PUB-200729-8	32720689	Li, L.Y., Li, J.M., Ning, L.J., Lu, D.L., Luo, Y., Ma, Q., Limbu, S.M., Li, D.L., Chen, L.Q., Lodhi, I.J., Degrace, P., Zhang, M.L., Du, Z.Y.	Mitochondrial Fatty Acid &#x3b2;-Oxidation Inhibition Promotes Glucose Utilization and Protein Deposition through Energy Homeostasis Remodeling in Fish	The Journal of nutrition	2020	150(9)	2322-2335
ZDB-PUB-200731-15	32728128	Rassier, G.T., Silveira, T.L.R., Remião, M.H., Daneluz, L.O., Martins, A.W.S., Dellagostin, E.N., Ortiz, H.G., Domingues, W.B., Komninou, E.R., Kütter, M.T., Marins, L.F.F., Campos, V.F.	Evaluation of qPCR reference genes in GH-overexpressing transgenic zebrafish (Danio rerio)	Scientific Reports	2020	10	12692
ZDB-PUB-200807-7	32755465	Shir-Mohammadi, K., Perry, S.F.	Expression of ion-transport genes in ionocytes isolated from larval zebrafish (Danio rerio) exposed to acidic or Na<sup>+</sup> deficient water	American journal of physiology. Regulatory, integrative and comparative physiology	2020	319(4)	R412-R427
ZDB-PUB-200810-38	32770041	Ohlebusch, B., Borst, A., Frankenbach, T., Klopocki, E., Jakob, F., Liedtke, D., Graser, S.	Investigation of alpl expression and Tnap-activity in zebrafish implies conserved functions during skeletal and neuronal development	Scientific Reports	2020	10	13321
ZDB-PUB-200812-8	32779569	Ichino, N., Serres, M.R., Urban, R.M., Urban, M.D., Treichel, A.J., Schaefbauer, K.J., Greif, L.E., Varshney, G.K., Skuster, K.J., McNulty, M.S., Daby, C.L., Wang, Y., Liao, H.K., El-Rass, S., Ding, Y., Liu, W., Anderson, J.L., Wishman, M.D., Sabharwal, A., Schimmenti, L.A., Sivasubbu, S., Balciunas, D., Hammerschmidt, M., Farber, S.A., Wen, X.Y., Xu, X., McGrail, M., Essner, J.J., Burgess, S.M., Clark, K.J., Ekker, S.C.	Building the vertebrate codex using the gene breaking protein trap library	eLIFE	2020	9	
ZDB-PUB-200817-6	32795812	Luo, Y., Chen, H., Li, D., Zhan, M., Hou, L., Dong, W., Luo, Y., Xie, L.	The effects of norethindrone on the ontogeny of gene expression along the hypothalamic-pituitary-adrenal and hypothalamic-pituitary-gonadal axes in zebrafish (Danio rerio)	The Science of the total environment	2020	747	141554
ZDB-PUB-200818-20	32805708	Oakes, J.A., Barnard, L., Storbeck, K.H., Cunliffe, V.T., Krone, N.P.	11&#x3b2;-hydroxylase loss disrupts steroidogenesis and reproductive function in zebrafish	The Journal of endocrinology	2020	247(2)	197-212
ZDB-PUB-201002-108	32956700	Fallah, H.P., Habibi, H.R.	Role of GnRH and GnIH in paracrine/autocrine control of final oocyte maturation	General and comparative endocrinology	2020	299	113619
ZDB-PUB-201002-146	32969791	Weger, M., Weger, B.D., Schink, A., Takamiya, M., Stegmaier, J., Gobet, C., Parisi, A., Kobitski, A.Y., Mertes, J., Krone, N., Strähle, U., Nienhaus, G.U., Mikut, R., Gachon, F., Gut, P., Dickmeis, T.	MondoA regulates gene expression in cholesterol biosynthesis-associated pathways required for zebrafish epiboly	eLIFE	2020	9	
ZDB-PUB-201002-29	32918516	Hernandez-Perez, M., Kulkarni, A., Samala, N., Sorrell, C., El, K., Haider, I., Mukhtar Aleem, A., Holman, T.R., Rai, G., Tersey, S.A., Mirmira, R.G., Anderson, R.M.	A 12-lipoxygenase-Gpr31 signaling axis is required for pancreatic organogenesis in the zebrafish	FASEB journal : official publication of the Federation of American Societies for Experimental Biology	2020	34(11)	14850-14862
ZDB-PUB-201120-115	33186381	Schindler, M., Blumenthal, A., Moeller, M.J., Endlich, K., Endlich, N.	Adriamycin does not damage podocytes of zebrafish larvae	PLoS One	2020	15	e0242436
ZDB-PUB-201120-161	33207197	Parshina, E.A., Eroshkin, F.M., Оrlov, E.E., Gyoeva, F.K., Shokhina, A.G., Staroverov, D.B., Belousov, V.V., Zhigalova, N.A., Prokhortchouk, E.B., Zaraisky, A.G., Martynova, N.Y.	Cytoskeletal Protein Zyxin Inhibits the Activity of Genes Responsible for Embryonic Stem Cell Status	Cell Reports	2020	33	108396
ZDB-PUB-201125-4	33229575	Kelu, J.J., Pipalia, T.G., Hughes, S.M.	Circadian regulation of muscle growth independent of locomotor activity	Proceedings of the National Academy of Sciences of the United States of America	2020	117(49)	31208-31218
ZDB-PUB-201202-19	33259600	Oltova, J., Svoboda, O., Machonova, O., Svatonova, P., Traver, D., Kolar, M., Bartunek, P.	Zebrafish Kit ligands cooperate with erythropoietin to promote erythroid cell expansion	Blood advances	2020	4	5915-5924
ZDB-PUB-201202-4	33254711	Biswas, S., Ghosh, S., Samanta, A., Das, S., Mukherjee, U., Maitra, S.	Bisphenol A impairs reproductive fitness in zebrafish ovary: Potential involvement of oxidative/nitrosative stress, inflammatory and apoptotic mediators	Environmental pollution (Barking, Essex : 1987)	2020	267	115692
ZDB-PUB-201212-14	33298459	Ferrero, G., Miserocchi, M., Di Ruggiero, E., Wittamer, V.	A c<i>sf1rb</i> mutation uncouples two waves of microglia development in zebrafish	Development (Cambridge, England)	2020	148(1)	
ZDB-PUB-201229-4	33355143	Yang, B., Maddison, L.A., Zaborska, K.E., Dai, C., Yin, L., Tang, Z., Zang, L., Jacobson, D.A., Powers, A.C., Chen, W.	RIPK3-mediated inflammation is a conserved &#x3b2; cell response to ER stress	Science advances	2020	6(51)	
ZDB-PUB-201229-5	33355239	Fei, F., Sun, S., Li, Q., Pei, Z., Wang, L., Zhang, R., Luo, F., Yu, M., Wang, X.	Combinatorial normalization of liver-derived cytokine pathways alleviates hepatic tumor-associated cachexia in zebrafish	Cancer research	2020	81(4)	873-884
ZDB-PUB-210101-9	33377648	Wu, S.Y., Yang, W.Y., Cheng, C.C., Lin, K.H., Sampurna, B.P., Chan, S.M., Yuh, C.H.	Low molecular weight fucoidan inhibits hepatocarcinogenesis and nonalcoholic fatty liver disease in zebrafish via ASGR/STAT3/HNF4A signaling	Clinical and translational medicine	2020	10	e252
ZDB-PUB-210106-19	33396047	Meyer-Alert, H., Wiseman, S., Tang, S., Hecker, M., Hollert, H.	Identification of molecular toxicity pathways across early life-stages of zebrafish exposed to PCB126 using a whole transcriptomics approach	Ecotoxicology and environmental safety	2021	208	111716
ZDB-PUB-210109-22	33414428	El-Sahli, S., Hua, K., Sulaiman, A., Chambers, J., Li, L., Farah, E., McGarry, S., Liu, D., Zheng, P., Lee, S.H., Cui, J., Ekker, M., Côté, M., Alain, T., Li, X., D'Costa, V.M., Wang, L., Gadde, S.	A triple-drug nanotherapy to target breast cancer cells, cancer stem cells, and tumor vasculature	Cell Death & Disease	2021	12	8
ZDB-PUB-210112-10	33429147	Gagnaire, B., Arcanjo, C., Cavalié, I., Camilleri, V., Simon, O., Dubourg, N., Floriani, M., Adam-Guillermin, C.	Effects of gamma ionizing radiation exposure on Danio rerio embryo-larval stages - comparison with tritium exposure	Journal of hazardous materials	2020	408	124866
ZDB-PUB-210128-11	33497902	Nasri, A., Mezni, A., Lafon, P.A., Wahbi, A., Cubedo, N., Clair, P., Harrath, A.H., Beyrem, H., Rossel, M., Perrier, V.	Ethinylestradiol (EE2) residues from birth control pills impair nervous system development and swimming behavior of zebrafish larvae	The Science of the total environment	2021	770	145272
ZDB-PUB-210129-6	33505312	Sharma, P., Kumari, S., Sharma, J., Purohit, R., Singh, D.	Hesperidin Interacts With CREB-BDNF Signaling Pathway to Suppress Pentylenetetrazole-Induced Convulsions in Zebrafish	Frontiers in pharmacology	2021	11	607797
ZDB-PUB-210202-22	33524105	Dai, X., Cheng, X., Huang, J., Gao, Y., Wang, D., Feng, Z., Zhai, G., Lou, Q., He, J., Wang, Z., Yin, Z.	Rbm46, a novel germ cell specific factor, modulates meiotic progression and spermatogenesis	Biology of reproduction	2021	104(5)	1139-1153
ZDB-PUB-210202-28	33524730	Zhang, Y., Jiao, Y., Tao, Y., Li, Z., Yu, H., Han, S., Yang, Y.	Monobutyl phthalate can induce autophagy and metabolic disorders by activating the ire1a-xbp1 pathway in zebrafish liver	Journal of hazardous materials	2021	412	125243
ZDB-PUB-210213-9	33573230	Atienzar-Aroca, R., Aroca-Aguilar, J.D., Alexandre-Moreno, S., Ferre-Fernández, J.J., Bonet-Fernández, J.M., Cabañero-Varela, M.J., Escribano, J.	Knockout of <i>myoc</i> Provides Evidence for the Role of Myocilin in Zebrafish Sex Determination Associated with Wnt Signalling Downregulation	Biology	2021	10(2)	
ZDB-PUB-210217-6	33589679	Crespo, D., Assis, L.H.C., Zhang, Y.T., Safian, D., Furmanek, T., Skaftnesmo, K.O., Norberg, B., Ge, W., Choi, Y.C., den Broeder, M.J., Legler, J., Bogerd, J., Schulz, R.W.	Insulin-like 3 affects zebrafish spermatogenic cells directly and via Sertoli cells	Communications biology	2021	4	204
ZDB-PUB-210328-3	33771553	Pham, D.H., Kudira, R., Xu, L., Valencia, C.A., Ellis, J.L., Shi, T., Evason, K.J., Osuji, I., Matuschek, N., Pfuher, L., Mullen, M., Mohanty, S.K., Husami, A., Bull, L.N., Zhang, K., Wali, S., Yin, C., Miethke, A.	Deleterious variants in ABCC12 are detected in idiopathic chronic cholestasis and cause intrahepatic bile duct loss in model organisms: ABCC12 pathogenic variants lead to cholestasis	Gastroenterology	2021	161(1)	287-300.e16
ZDB-PUB-210407-47	33808773	Licitra, R., Marchese, M., Brogi, L., Fronte, B., Pitto, L., Santorelli, F.M.	Nutraceutical Screening in a Zebrafish Model of Muscular Dystrophy: Gingerol as a Possible Food Aid	Nutrients	2021	13(3)	
ZDB-PUB-210410-11	33836087	Zhang, Q., He, X., Yao, S., Lin, T., Zhang, L., Chen, D., Chen, C., Yang, Q., Li, F., Zhu, Y.M., Guan, M.X.	Ablation of Mto1 in zebrafish exhibited hypertrophic cardiomyopathy manifested by mitochondrion RNA maturation deficiency	Nucleic acids research	2021	49(8)	4689-4704
ZDB-PUB-210428-20	33900016	Jamadagni, P., Breuer, M., Schmeisser, K., Cardinal, T., Kassa, B., Parker, J.A., Pilon, N., Samarut, E., Patten, S.A.	Chromatin remodeller CHD7 is required for GABAergic neuron development by promoting PAQR3 expression	EMBO reports	2021	22(6)	e50958
ZDB-PUB-210515-16	33989520	Naser, F.J., Jackstadt, M.M., Fowle-Grider, R., Spalding, J.L., Cho, K., Stancliffe, E., Doonan, S.R., Kramer, E.T., Yao, L., Krasnick, B., Ding, L., Fields, R.C., Kaufman, C.K., Shriver, L.P., Johnson, S.L., Patti, G.J.	Isotope tracing in adult zebrafish reveals alanine cycling between melanoma and liver	Cell Metabolism	2021	33(7)	1493-1504.e5
ZDB-PUB-210608-20	34095146	Crouzier, L., Diez, C., Richard, E.M., Cubedo, N., Barbereau, C., Rossel, M., Delaunay, T., Maurice, T., Delprat, B.	Loss of Pde6a Induces Rod Outer Segment Shrinkage and Visual Alterations in <i>pde6a<sup>Q70X</sup></i> Mutant Zebrafish, a Relevant Model of Retinal Dystrophy	Frontiers in cell and developmental biology	2021	9	675517
ZDB-PUB-210611-8	34111526	Han, S.L., Qian, Y.C., Limbu, S.M., Wang, J., Chen, L.Q., Zhang, M.L., Du, Z.Y.	Lipolysis and lipophagy play individual and interactive roles in regulating triacylglycerol and cholesterol homeostasis and mitochondrial form in zebrafish	Biochimica et biophysica acta. Molecular and cell biology of lipids	2021	1866(9)	158988
ZDB-PUB-210612-2	34114560	Jacobs, S.H., Dóró, E., Hammond, F.R., Nguyen-Chi, M.E., Lutfalla, G., Wiegertjes, G.F., Forlenza, M.	Occurrence of foamy macrophages during the innate response of zebrafish to trypanosome infections	eLIFE	2021	10	
ZDB-PUB-210616-11	34122528	Hoffmann, S., Roeth, R., Diebold, S., Gogel, J., Hassel, D., Just, S., Rappold, G.A.	Identification and Tissue-Specific Characterization of Novel SHOX-Regulated Genes in Zebrafish Highlights SOX Family Members Among Other Genes	Frontiers in genetics	2021	12	688808
ZDB-PUB-210616-20	34125183	Hinman, M.N., Richardson, J.I., Sockol, R.A., Aronson, E.D., Stednitz, S.J., Murray, K.N., Berglund, J.A., Guillemin, K.	Zebrafish mbnl mutants model physical and molecular phenotypes of myotonic dystrophy	Disease models & mechanisms	2021	14(6)	
ZDB-PUB-210622-26	34143769	Pottie, L., Van Gool, W., Vanhooydonck, M., Hanisch, F.G., Goeminne, G., Rajkovic, A., Coucke, P., Sips, P., Callewaert, B.	Loss of zebrafish atp6v1e1b, encoding a subunit of vacuolar ATPase, recapitulates human ARCL type 2C syndrome and identifies multiple pathobiological signatures	PLoS Genetics	2021	17	e1009603
ZDB-PUB-210622-52	34153034	Quillien, A., Gilbert, G., Boulet, M., Ethuin, S., Waltzer, L., Vandel, L.	Prmt5 promotes vascular morphogenesis independently of its methyltransferase activity	PLoS Genetics	2021	17	e1009641
ZDB-PUB-210625-9	34165081	Ma, J., Scott, C.A., Ho, Y.N., Mahabaleshwar, H., Marsay, K.S., Zhang, C., Teow, C.K., Ng, S.S., Zhang, W., Tergaonkar, V., Partridge, L.J., Roy, S., Amaya, E., Carney, T.J.	Matriptase activation of Gq drives epithelial disruption and inflammation via RSK and DUOX	eLIFE	2021	10	
ZDB-PUB-210629-12	34172795	Mikdache, A., Boueid, M.J., van der Spek, L., Lesport, E., Delespierre, B., Loisel-Duwattez, J., Degerny, C., Tawk, M.	Rgs4 is a regulator of mTOR activity required for motoneuron axon outgrowth and neuronal development in zebrafish	Scientific Reports	2021	11	13338
ZDB-PUB-210630-9	34185526	Niksirat, H., Siino, V., Steinbach, C., Levander, F.	High-Resolution Proteomic Profiling Shows Sexual Dimorphism in Zebrafish Heart-Associated Proteins	Journal of Proteome Research	2021	20(8)	4075-4088
ZDB-PUB-210703-27	34206901	Okuda, K.S., Ng, M.F., Ruslan, N.F., Bower, N.I., Song, D.S.S., Chen, H., Baek, S., Crosier, P.S., Koltowska, K., Astin, J.W., Tan, P.J., Hogan, B.M., Patel, V.	3,4-Difluorobenzocurcumin Inhibits Vegfc-Vegfr3-Erk Signalling to Block Developmental Lymphangiogenesis in Zebrafish	Pharmaceuticals (Basel, Switzerland)	2021	14(7)	
ZDB-PUB-210703-35	34209401	Steeman, T.J., Rubiolo, J.A., Sánchez, L.E., Calcaterra, N.B., Weiner, A.M.J.	Conservation of Zebrafish MicroRNA-145 and Its Role during Neural Crest Cell Development	Genes	2021	12(7)	
ZDB-PUB-210716-6	34262881	Xie, L., Chen, Z., Guo, H., Tao, Y., Miao, X., Wu, R., Li, Y.	Congenital Asplenia Interrupts Immune Homeostasis and Leads to Excessive Systemic Inflammation in Zebrafish	Frontiers in cellular and infection microbiology	2021	11	668859
ZDB-PUB-210828-23	34440752	Song, J., Lu, Y., Cheng, X., Shi, C., Lou, Q., Jin, X., He, J., Zhai, G., Yin, Z.	Functions of the Thyroid-Stimulating Hormone on Key Developmental Features Revealed in a Series of Zebrafish Dyshormonogenesis Models	Cells	2021	10(8)	
ZDB-PUB-210922-5	34537895	Sharma, S., Rana, A.K., Sharma, A., Singh, D.	Inhibition of Mammalian Target of Rapamycin Attenuates Recurrent Seizures Associated Cardiac Damage in a Zebrafish Kindling Model of Chronic Epilepsy	Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology	2021	17(1-2)	334-349
ZDB-PUB-210922-6	34537814	Bian, W.P., Pu, S.Y., Xie, S.L., Wang, C., Deng, S., Strauss, P.R., Pei, D.S.	Loss of mpv17 affected early embryonic development via mitochondria dysfunction in zebrafish	Cell death discovery	2021	7	250
ZDB-PUB-211001-9	34591076	Hu, B., Rodriguez, J.J., Kakkerla Balaraju, A., Gao, Y., Nguyen, N.T., Steen, H., Suhaib, S., Chen, S., Lin, F.	Glypican 4 mediates Wnt transport between germ layers via signaling filopodia	The Journal of cell biology	2021	220(12)	
ZDB-PUB-211116-3	34765602	Xu, R., Du, S.	Overexpression of Lifeact-GFP Disrupts F-Actin Organization in Cardiomyocytes and Impairs Cardiac Function	Frontiers in cell and developmental biology	2021	9	746818
ZDB-PUB-211207-1	34863478	Feugere, L., Scott, V.F., Rodriguez-Barucg, Q., Beltran-Alvarez, P., Wollenberg Valero, K.C.	Thermal stress induces a positive phenotypic and molecular feedback loop in zebrafish embryos	Journal of thermal biology	2021	102	103114
ZDB-PUB-211230-24	34950046	van de Pol, I.L.E., Hermaniuk, A., Verberk, W.C.E.P.	Interacting Effects of Cell Size and Temperature on Gene Expression, Growth, Development and Swimming Performance in Larval Zebrafish	Frontiers in Physiology	2021	12	738804
ZDB-PUB-220104-20	34978328	Tanaka, S., Zmora, N., Levavi-Sivan, B., Zohar, Y.	Vasoactive intestinal peptide indirectly elicits pituitary LH secretion independent of GnRH in female zebrafish	Endocrinology	2022	163(2)	
ZDB-PUB-220126-29	35065906	Jamieson-Lucy, A.H., Kobayashi, M., James Aykit, Y., Elkouby, Y., Escobar-Aguirre, M., Vejnar, C., Giraldez, A., Mullins, M.C.	A proteomics approach identifies novel resident zebrafish Balbiani body proteins Cirbpa and Cirbpb	Developmental Biology	2022	484	1-11
ZDB-PUB-220210-4	35137054	Epting, D., Decker, E., Ott, E., Eisenberger, T., Bader, I., Bachmann, N., Bergmann, C.	The ciliary transition zone protein TMEM218 synergistically interacts with the NPHP module and its reduced dosage leads to a wide range of syndromic ciliopathies	Human molecular genetics	2022	31(14)	2295-2306
ZDB-PUB-220219-13	35178388	Sharpe, M., González-Rosa, J.M., Wranitz, F., Jeffrey, S., Copenhaver, K., Burns, C.G., Burns, C.E.	Ruvbl2 Suppresses Cardiomyocyte Proliferation During Zebrafish Heart Development and Regeneration	Frontiers in cell and developmental biology	2022	10	800594
ZDB-PUB-220308-6	35249239	Carstensen, M.B., Medvetzky, A., Weinberger, A., Driever, W., Gothilf, Y., Rath, M.F.	Genetic ablation of the Bsx homeodomain transcription factor in zebrafish: Impact on mature pineal gland morphology and circadian behavior	Journal of pineal research	2022	72(4)	e12795
ZDB-PUB-220319-9	35303678	Wang, Y.S., Huang, Y.S., Chiu, C.C., Wu, T.Y., Zhou, J.Q., Liang, S.R., Tai, M.H., Wu, C.Y.	Interaction of transcription factors Islet2 and Nr2f1b to control vascular patterning during zebrafish development	Biochemical and Biophysical Research Communications	2022	604	123-129
ZDB-PUB-220323-9	35309302	Hsu, A.Y., Wang, T., Syahirah, R., Liu, S., Li, K., Zhang, W., Wang, J., Cao, Z., Tian, S., Matosevic, S., Staiger, C.J., Wan, J., Deng, Q.	Rora Regulates Neutrophil Migration and Activation in Zebrafish	Frontiers in immunology	2022	13	756034
ZDB-PUB-220422-6	35445010	Pan, Y.J., Tong, S.K., Hsu, C.W., Weng, J.H., Chung, B.C.	Zebrafish Establish Female Germ Cell Identity by Advancing Cell Proliferation and Meiosis	Frontiers in cell and developmental biology	2022	10	866267
ZDB-PUB-220512-18	35545295	Hortle, E., Tran, V.L., Wright, K., Fontaine, A.R., Pinello, N., O'Rourke, M.B., Wong, J.J., Hansbro, P.M., Britton, W.J., Oehlers, S.H.	OXSR1 inhibits inflammasome activation by limiting potassium efflux during mycobacterial infection	Life science alliance	2022	5(9)	
ZDB-PUB-220527-14	35617428	Morgan, R., Andreassen, A.H., Åsheim, E.R., Finnøen, M.H., Dresler, G., Brembu, T., Loh, A., Miest, J.J., Jutfelt, F.	Reduced physiological plasticity in a fish adapted to stable temperatures	Proceedings of the National Academy of Sciences of the United States of America	2022	119	e2201919119
ZDB-PUB-220530-15	35628411	Tanaka, S., Zmora, N., Levavi-Sivan, B., Zohar, Y.	Chemogenetic Depletion of Hypophysiotropic GnRH Neurons Does Not Affect Fertility in Mature Female Zebrafish	International Journal of Molecular Sciences	2022	23(10)	
ZDB-PUB-220615-2	35697798	Karampelias, C., Watt, K., Mattsson, C.L., Ruiz, Á.F., Rezanejad, H., Mi, J., Liu, X., Chu, L., Locasale, J.W., Korbutt, G.S., Rovira, M., Larsson, O., Andersson, O.	MNK2 deficiency potentiates &#x3b2;-cell regeneration via translational regulation	Nature Chemical Biology	2022	18(9)	942-953
ZDB-PUB-220625-8	35740999	Tian, J., Du, Y., Yu, E., Lei, C., Xia, Y., Jiang, P., Li, H., Zhang, K., Li, Z., Gong, W., Xie, J., Wang, G.	Prostaglandin 2&#x3b1; Promotes Autophagy and Mitochondrial Energy Production in Fish Hepatocytes	Cells	2022	11(12)	
ZDB-PUB-220722-6	35858306	Ciampi, L., Mantica, F., López-Blanch, L., Permanyer, J., Rodriguez-Marín, C., Zang, J., Cianferoni, D., Jiménez-Delgado, S., Bonnal, S., Miravet-Verde, S., Ruprecht, V., Neuhauss, S.C.F., Banfi, S., Carrella, S., Serrano, L., Head, S.A., Irimia, M.	Specialization of the photoreceptor transcriptome by <i>Srrm3</i>-dependent microexons is required for outer segment maintenance and vision	Proceedings of the National Academy of Sciences of the United States of America	2022	119	e2117090119
ZDB-PUB-220722-9	35853004	Ahi, E.P., Brunel, M., Tsakoumis, E., Chen, J., Schmitz, M.	Appetite regulating genes in zebrafish gut; a gene expression study	PLoS One	2022	17	e0255201
ZDB-PUB-220810-2	35942692	Babu, S., Takeuchi, Y., Masai, I.	Banp regulates DNA damage response and chromosome segregation during the cell cycle in zebrafish retina	eLIFE	2022	11	
ZDB-PUB-220907-16	36063588	Xia, Z., Yang, X., Bi, X., Tong, X., Min, J., Wang, F.	Zinc transporter Slc30a1 regulates melanocyte development by interacting with mt2 in zebrafish	European journal of cell biology	2022	101	151272
ZDB-PUB-220911-11	36077382	Atienzar-Aroca, R., Ferre-Fernández, J.J., Tevar, A., Bonet-Fernández, J.M., Cabañero, M.J., Ruiz-Pastor, M.J., Cuenca, N., Aroca-Aguilar, J.D., Escribano, J.	Transgenic Overexpression of Myocilin Leads to Variable Ocular Anterior Segment and Retinal Alterations Associated with Extracellular Matrix Abnormalities in Adult Zebrafish	International Journal of Molecular Sciences	2022	23(17)	
ZDB-PUB-220924-25	36143473	Chen, C., He, M., Li, X., Yu, L., Liu, Y., Yang, Y., Li, L., Jia, J., Li, B.	H<sub>2</sub>O<sub>2</sub>/DEM-Promoted <i>Maft</i> Promoter Demethylation Drives Nrf2/ARE Activation in Zebrafish	Life (Basel, Switzerland)	2022	12(9)	
ZDB-PUB-220929-6	36156365	Wang, Y., Wu, H., Sheng, H., Wang, Y., Li, X., Wang, Y., Zhao, L.	Discovery of anti-stroke active substances in Guhong injection based on multi-phenotypic screening of zebrafish	Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie	2022	155	113744
ZDB-PUB-221025-6	36274083	Kranert, K., Woźny, M., Podlasz, P., Wąsowicz, K., Brzuzan, P.	MiR92b-3p synthetic analogue impairs zebrafish embryonic development, leading to ocular defects, decreased movement and hatching rate, and increased mortality	Journal of applied genetics	2022	64(1)	145-157
ZDB-PUB-221104-6	36326068	Lim, M.Y., Bernier, N.J.	Zebrafish parental progeny investment in response to cycling thermal stress and hypoxia: deposition of heat shock proteins but not cortisol	The Journal of experimental biology	2022	225(21)	
ZDB-PUB-221129-9	36442393	Lasbleiz, C., Peyrel, A., Tarot, P., Sarniguet, J., Crouzier, L., Cubedo, N., Delprat, B., Rossel, M., Maurice, T., Liévens, J.C.	Sigma-1 receptor agonist PRE-084 confers protection against TAR DNA-binding protein-43 toxicity through NRF2 signalling	Redox Biology	2022	58	102542102542
ZDB-PUB-221203-3	36458546	Rayrikar, A.Y., Wagh, G.A., Santra, M., Patra, C.	Ccn2a-FGFR1-SHH signaling is necessary for intervertebral disc homeostasis and regeneration in adult zebrafish	Development (Cambridge, England)	2022	150(1)	
ZDB-PUB-221209-7	36477359	Weeks, O., Miller, B.M., Pepe-Mooney, B.J., Oderberg, I.M., Freeburg, S.H., Smith, C.J., North, T.E., Goessling, W.	Embryonic alcohol exposure disrupts the ubiquitin-proteasome system	JCI insight	2022	7(23)	
ZDB-PUB-221212-15	36500990	Poudel, S., Martins, G., Cancela, M.L., Gavaia, P.J.	Regular Supplementation with Antioxidants Rescues Doxorubicin-Induced Bone Deformities and Mineralization Delay in Zebrafish	Nutrients	2022	14(23)	
ZDB-PUB-221216-26	36520929	Chen, W., Zhai, Y., Zhu, B., Wu, K., Fan, Y., Zhou, X., Liu, L., Ge, W.	Loss of growth differentiation factor 9 causes an arrest of early folliculogenesis in zebrafish-A novel insight into its action mechanism	PLoS Genetics	2022	18	e1010318e1010318
ZDB-PUB-221220-4	36532084	Xiao, X., Liu, Z., Su, G., Liu, H., Yin, W., Guan, Y., Jing, S., Du, L., Li, F., Li, N., Yang, P.	A novel uveitis model induced by lipopolysaccharide in zebrafish	Frontiers in immunology	2022	13	10428491042849
ZDB-PUB-221224-15	36553446	Linnerz, T., Sung, Y.J., Rolland, L., Astin, J.W., Dalbeth, N., Hall, C.J.	Uricase-Deficient Larval Zebrafish with Elevated Urate Levels Demonstrate Suppressed Acute Inflammatory Response to Monosodium Urate Crystals and Prolonged Crystal Persistence	Genes	2022	13(12)	
ZDB-PUB-230103-2	36590169	Wu, C., Hu, B., Wang, L., Wu, X., Gu, H., Dong, H., Yan, J., Qi, Z., Zhang, Q., Chen, H., Yu, B., Hu, S., Qian, Y., Dong, S., Li, Q., Wang, X., Long, J.	Assessment of stromal SCD-induced drug resistance of PDAC using 3D-printed zPDX model chips	iScience	2022	26	105723105723
ZDB-PUB-230117-12	36646689	Gong, Y., Yang, B., Zhang, D., Zhang, Y., Tang, Z., Yang, L., Coate, K.C., Yin, L., Covington, B.A., Patel, R.S., Siv, W.A., Sellick, K., Shou, M., Chang, W., Danielle Dean, E., Powers, A.C., Chen, W.	Hyperaminoacidemia induces pancreatic &#x3b1; cell proliferation via synergism between the mTORC1 and CaSR-Gq signaling pathways	Nature communications	2023	14	235235
ZDB-PUB-230228-32	36843607	Ritter, D.J., Choudhary, D., Unlu, G., Knapik, E.W.	Rgp1 contributes to craniofacial cartilage development and Rab8a-mediated collagen II secretion	Frontiers in endocrinology	2023	14	11204201120420
ZDB-PUB-230330-39	36978831	Yu, L., Li, X., He, M., Wang, Q., Chen, C., Li, F., Li, B., Li, L.	Antioxidant Carboxymethyl Chitosan Carbon Dots with Calcium Doping Achieve Ultra-Low Calcium Concentration for Iron-Induced Osteoporosis Treatment by Effectively Enhancing Calcium Bioavailability in Zebrafish	Antioxidants (Basel, Switzerland)	2023	12(3)	
ZDB-PUB-230501-42	37123221	Kondo, M., Kimura, K., Kobayashi-Sun, J., Yamamori, S., Taniguchi, M., Traver, D., Kobayashi, I.	The sinusoidal hematopoietic niche is formed by Jam1a via Notch signaling in the zebrafish kidney	iScience	2023	26	106508106508
ZDB-PUB-230525-39	37223044	Pogoda, H.M., Riedl-Quinkertz, I., Hammerschmidt, M.	Direct BMP signaling to chordoblasts is required for the initiation of segmented notochord sheath mineralization in zebrafish vertebral column development	Frontiers in endocrinology	2023	14	11073391107339
ZDB-PUB-230625-37	37353106	Tamaoki, J., Maeda, H., Kobayashi, I., Takeuchi, M., Ohashi, K., Gore, A., Bonkhofer, F., Patient, R., Weinstein, B.M., Kobayashi, M.	LSD1 promotes the egress of hematopoietic stem and progenitor cells into the bloodstream during the endothelial-to-hematopoietic transition	Developmental Biology	2023	501	92-103
ZDB-PUB-230706-45	37407555	Ferlazzo, G.M., Gambetta, A.M., Amato, S., Cannizzaro, N., Angiolillo, S., Arboit, M., Diamante, L., Carbognin, E., Romani, P., La Torre, F., Galimberti, E., Pflug, F., Luoni, M., Giannelli, S., Pepe, G., Capocci, L., Di Pardo, A., Vanzani, P., Zennaro, L., Broccoli, V., Leeb, M., Moro, E., Maglione, V., Martello, G.	Genome-wide screening in pluripotent cells identifies Mtf1 as a suppressor of mutant huntingtin toxicity	Nature communications	2023	14	39623962
ZDB-PUB-230727-44	37497728	Lim, M.Y., Bernier, N.J.	Intergenerational plasticity to cycling high temperature and hypoxia affects offspring stress responsiveness and tolerance in zebrafish	The Journal of experimental biology	2023	226(16)	
ZDB-PUB-230810-59	37555121	Liu, M.K., Chen, Y.J., Chen, F., Lin, Z.X., Zhu, Z.C., Lin, Y., Fang, Y.F., Wu, D.M.	Intervention effects and related mechanisms of glycyrrhizic acid on zebrafish with Hirschsprung-associated enterocolitis	World journal of gastrointestinal surgery	2023	15	131713301317-1330
ZDB-PUB-230916-54	37713421	Zhai, Y., Zhang, X., Zhao, C., Geng, R., Wu, K., Yuan, M., Ai, N., Ge, W.	Rescue of bmp15 deficiency in zebrafish by mutation of inha reveals mechanisms of BMP15 regulation of folliculogenesis	PLoS Genetics	2023	19	e1010954e1010954
ZDB-PUB-231115-1	37965068	Ikeda, D., Fujita, S., Toda, K., Yaginuma, Y., Kan-No, N., Watabe, S.	Cold-induced muscle atrophy in zebrafish: Insights from swimming activity and gene expression analysis	Biochemistry and biophysics reports	2023	36	101570101570
ZDB-PUB-231214-14	38095085	Chiang, D.Y., Verkerk, A.O., Victorio, R., Shneyer, B.I., van der Vaart, B., Jouni, M., Narendran, N., Kc, A., Sampognaro, J.R., Vetrano-Olsen, F., Oh, J.S., Buys, E., de Jonge, B., Shah, D.A., Kiviniemi, T., Burridge, P.W., Bezzina, C.R., Akhmanova, A., MacRae, C.A.	The Role of <i>MAPRE2</i> and Microtubules in Maintaining Normal Ventricular Conduction	Circulation research	2023	134(1)	46-59
ZDB-PUB-240128-11	38280871	Li, G., Sun, Y., Kwok, I., Yang, L., Wen, W., Huang, P., Wu, M., Li, J., Huang, Z., Liu, Z., He, S., Peng, W., Bei, J.X., Ginhoux, F., Ng, L.G., Zhang, Y.	Cebp1 and Cebp&#x3b2; transcriptional axis controls eosinophilopoiesis in zebrafish	Nature communications	2024	15	811811
ZDB-PUB-240301-6	38421617	Ou, Y., Li, H., Li, J., Dai, X., He, J., Wang, S., Liu, Q., Yang, C., Wang, J., Zhao, R., Yin, Z., Shu, Y., Liu, S.	Formation of different polyploids through disrupting meiotic crossover frequencies based on cntd1 knockout in zebrafish	Molecular Biology and Evolution	2024	41(3)	
ZDB-PUB-240326-6	38527850	Ai, N., Han, C.R., Zhao, H., Cheng, S.Y., Ge, W.	Disruption of thyroid hormone receptor thrab leads to female infertility in zebrafish	Endocrinology	2024	165(5)	
ZDB-PUB-240328-23	38542412	Zhou, C., Li, M., Sun, Y., Sultan, Y., Li, X.	Systematic Identification of Long Noncoding RNAs during Three Key Organogenesis Stages in Zebrafish	International Journal of Molecular Sciences	2024	25(6)	
ZDB-PUB-240419-9	38637503	Zhao, S., Mo, G., Wang, Q., Xu, J., Yu, S., Huang, Z., Liu, W., Zhang, W.	Role of RB1 in neurodegenerative diseases: inhibition of post-mitotic neuronal apoptosis via Kmt5b	Cell death discovery	2024	10	182182
ZDB-PUB-240627-7	38928267	Zanardini, M., Zhang, W., Habibi, H.R.	Arginine Vasotocin Directly Regulates Spermatogenesis in Adult Zebrafish (<i>Danio rerio</i>) Testes	International Journal of Molecular Sciences	2024	25(12)	
ZDB-PUB-240724-13	39045128	Cotti, S., Di Biagio, C., Huysseune, A., Koppe, W., Forlino, A., Witten, P.E.	Matrix first, minerals later: fine-tuned dietary phosphate increases bone formation in zebrafish	JBMR plus	2024	8	ziae081ziae081
ZDB-PUB-240808-10	39114488	Xia, Z., Tang, B., Li, X., Li, X., Jia, Y., Jiang, J., Chen, J., Song, J., Liu, S., Min, J., Wang, F.	A Novel Role for the Longevity-Associated Protein SLC39A11 as a Manganese Transporter	Research (Washington, D.C.)	2024	7	04400440
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