ZFIN Publication ID PubMed ID Authors Title Journal Year Volume Pages
ZDB-PUB-040217-2 12477932 Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences Proceedings of the National Academy of Sciences of the United States of America 2002 99(26) 16899-903
ZDB-PUB-070726-29 17640903 Wang, D., Jao, L.E., Zheng, N., Dolan, K., Ivey, J., Zonies, S., Wu, X., Wu, K., Yang, H., Meng, Q., Zhu, Z., Zhang, B., Lin, S., and Burgess, S.M. Efficient genome-wide mutagenesis of zebrafish genes by retroviral insertions Proceedings of the National Academy of Sciences of the United States of America 2007 104(30) 12428-12433
ZDB-PUB-100625-9 20564202 Seo, J., Asaoka, Y., Nagai, Y., Hirayama, J., Yamasaki, T., Namae, M., Ohata, S., Shimizu, N., Negishi, T., Kitagawa, D., Kondoh, H., Furutani-Seiki, M., Penninger, J.M., Katada, T., and Nishina, H. Negative regulation of wnt11 expression by Jnk signaling during zebrafish gastrulation Journal of cellular biochemistry 2010 110(4) 1022-1037
ZDB-PUB-101108-29 21047546 Gautier, A., Le Gac, F., and Lareyre, J.J. The gsdf gene locus harbours evolutionary conserved and clustered genes preferentially expressed in fish previtellogenic oocytes Gene 2011 472(1-2) 7-17
ZDB-PUB-110921-28 21925157 Gallagher, T.L., Arribere, J.A., Geurts, P.A., Exner, C.R., McDonald, K.L., Dill, K.K., Marr, H.L., Adkar, S.S., Garnett, A.T., Amacher, S.L., and Conboy, J.G. Rbfox-regulated alternative splicing is critical for zebrafish cardiac and skeletal muscle functions Developmental Biology 2011 359(2) 251-61
ZDB-PUB-130221-6 23382537 Varshney, G.K., Lu, J., Gildea, D., Huang, H., Pei, W., Yang, Z., Huang, S.C., Schoenfeld, D.S., Pho, N., Casero, D., Hirase, T., Mosbrook-Davis, D.M., Zhang, S., Jao, L.E., Zhang, B., Woods, I.G., Zimmerman, S., Schier, A.F., Wolfsberg, T., Pellegrini, M., Burgess, S.M., and Lin, S. A large-scale zebrafish gene knockout resource for the genome-wide study of gene function Genome research 2013 23(4) 727-735
ZDB-PUB-130402-5 23468645 Drerup, C.M., and Nechiporuk, A.V. JNK-Interacting Protein 3 Mediates the Retrograde Transport of Activated c-Jun N-Terminal Kinase and Lysosomes PLoS Genetics 2013 9(2) e1003303
ZDB-PUB-130710-111 23813869 Liu, L.Y., Fox, C.S., North, T.E., and Goessling, W. Functional validation of GWAS gene candidates for abnormal liver function during zebrafish liver development Disease models & mechanisms 2013 6(5) 1271-8
ZDB-PUB-131029-1 24069208 Encinas, P., Garcia-Valtanen, P., Chinchilla, B., Gomez-Casado, E., Estepa, A., and Coll, J. Identification of Multipath Genes Differentially Expressed in Pathway-Targeted Microarrays in Zebrafish Infected and Surviving Spring Viremia Carp Virus (SVCV) Suggest Preventive Drug Candidates PLoS One 2013 8(9) e73553
ZDB-PUB-161203-14 27902697 Heanue, T.A., Boesmans, W., Bell, D.M., Kawakami, K., Vanden Berghe, P., Pachnis, V. A Novel Zebrafish ret Heterozygous Model of Hirschsprung Disease Identifies a Functional Role for mapk10 as a Modifier of Enteric Nervous System Phenotype Severity PLoS Genetics 2016 12 e1006439
ZDB-PUB-170303-4 28252024 Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. Evolution of complexity in the zebrafish synapse proteome Nature communications 2017 8 14613
ZDB-PUB-170609-3 28592872 Hu, Y.W., Wu, X.M., Ren, S.S., Cao, L., Nie, P., Chang, M.X. NOD1 deficiency impairs CD44a/Lck as well as PI3K/Akt pathway Scientific Reports 2017 7 2979
ZDB-PUB-170624-8 28642593 Zhang, C.Y., Yin, H.M., Wang, H., Su, D., Xia, Y., Yan, L.F., Fang, B., Liu, W., Wang, Y.M., Gu, A.H., Zhou, Y. Transforming growth factor-β1 regulates the nascent hematopoietic stem cell niche by promoting gluconeogenesis Leukemia 2017 32(2) 479-491
ZDB-PUB-171024-1 29059681 Yang, L., Zhou, X., Huang, W., Fang, Q., Hu, J., Yu, L., Ma, N., Zhang, W. Protective Effect of Phillyrin on Lethal LPS-Induced Neutrophil Inflammation in Zebrafish Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2017 43 2074-2087
ZDB-PUB-180223-36 29454830 Cao, L., Wu, X.M., Hu, Y.W., Xue, N.N., Nie, P., Chang, M.X. The discrepancy function of NLRC5 isoforms in antiviral and antibacterial immune responses Developmental and comparative immunology 2018 84 153-163
ZDB-PUB-190217-5 30771440 Quan, Y., Gong, L., He, J., Zhou, Y., Liu, M., Cao, Z., Li, Y., Peng, C. Aloe emodin induces hepatotoxicity by activating NF-κB inflammatory pathway and P53 apoptosis pathway in zebrafish Toxicology letters 2019 306 66-79
ZDB-PUB-190730-10 31356965 Zhang, Y., Takagi, N., Yuan, B., Zhou, Y., Si, N., Wang, H., Yang, J., Wei, X., Zhao, H., Bian, B. The protection of indolealkylamines on LPS-induced inflammation in zebrafish Journal of ethnopharmacology 2019 243 112122
ZDB-PUB-190830-12 31462001 Kim, S.S., Lee, J.A., Yeo, M.K. Reduction in Toxicity of Nano-Ag-Polyvinyl-pyrrolidone Using Hydra Proteins and Peptides during Zebrafish Embryogenesis Nanomaterials (Basel, Switzerland) 2019 9(9)
ZDB-PUB-191017-7 31616320 Zhou, J., Gu, X., Fan, X., Zhou, Y., Wang, H., Si, N., Yang, J., Bian, B., Zhao, H. Anti-inflammatory and Regulatory Effects of Huanglian Jiedu Decoction on Lipid Homeostasis and the TLR4/MyD88 Signaling Pathway in LPS-Induced Zebrafish Frontiers in Physiology 2019 10 1241
ZDB-PUB-191127-8 31768751 Luo, L., Zhou, J., Zhao, H., Fan, M., Gao, W. The anti-inflammatory effects of formononetin and ononin on lipopolysaccharide-induced zebrafish models based on lipidomics and targeted transcriptomics Metabolomics : Official journal of the Metabolomic Society 2019 15 153
ZDB-PUB-191204-4 31787979 Chen, M., Luo, Y., Xu, J., Chang, M.X., Liu, J.X. Copper Regulates the Susceptibility of Zebrafish Larvae to Inflammatory Stimuli by Controlling Neutrophil/Macrophage Survival Frontiers in immunology 2019 10 2599
ZDB-PUB-200519-3 32421721 Santos-Ledo, A., Washer, S., Dhanaseelan, T., Eley, L., Alqatani, A., Chrystal, P.W., Papoutsi, T., Henderson, D.J., Chaudhry, B. Alternative splicing of jnk1a in zebrafish determines first heart field ventricular cardiomyocyte numbers through modulation of hand2 expression PLoS Genetics 2020 16 e1008782
ZDB-PUB-200606-2 32493433 Gong, L., Yu, L., Gong, X., Wang, C., Hu, N., Dai, X., Peng, C., Li, Y. Exploration of anti-inflammatory mechanism of forsythiaside A and forsythiaside B in CuSO4-induced inflammation in zebrafish by metabolomic and proteomic analyses Journal of neuroinflammation 2020 17 173
ZDB-PUB-201229-24 33359185 Lu, Z., Cao, H., Liu, D., Zheng, Y., Tian, C., Liu, S., Quan, J., Shi, L., Liu, J., Yu, L. Optimal combination of anti-inflammatory components from Chinese medicinal formula Liang-Ge-San Journal of ethnopharmacology 2020 269 113747
ZDB-PUB-210202-1 33516931 Gong, L., Zhou, H., Wang, C., He, L., Guo, C., Peng, C., Li, Y. Hepatoprotective effect of Forsythiaside A against acetaminophen-induced liver injury in zebrafish: coupling network pharmacology with biochemical pharmacology Journal of ethnopharmacology 2021 271 113890
ZDB-PUB-220331-13 35352808 Derrick, C.J., Santos-Ledo, A., Eley, L., Henderson, D.J., Chaudhry, B. Sequential action of jnk genes establishes the embryonic left-right axis Development (Cambridge, England) 2022 149(9)
ZDB-PUB-220615-7 35700135 Deng, Z., Hou, K., Valencak, T.G., Luo, X.M., Liu, J., Wang, H. AI-2/LuxS Quorum Sensing System Promotes Biofilm Formation of Lactobacillus rhamnosus GG and Enhances the Resistance to Enterotoxigenic Escherichia coli in Germ-Free Zebrafish Microbiology spectrum 2022 10(4) e0061022
ZDB-PUB-221018-50 36229514 Kahsay, A., Rodriguez-Marquez, E., López-Pérez, A., Hörnblad, A., von Hofsten, J. Pax3 loss of function delays tumour progression in kRAS-induced zebrafish rhabdomyosarcoma models Scientific Reports 2022 12 17149
ZDB-PUB-230131-27 36716661 Zhou, C., Chen, J., Liu, K., Maharajan, K., Zhang, Y., Hou, L., Li, J., Mi, M., Xia, Q. Isoalantolactone protects against ethanol-induced gastric ulcer via alleviating inflammation through regulation of PI3K-Akt signaling pathway and Th17 cell differentiation Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 2023 160 114315114315
ZDB-PUB-230520-32 37207274 Li, Y., Zhang, L., Mao, M., He, L., Wang, T., Pan, Y., Zhao, X., Li, Z., Mu, X., Qian, Y., Qiu, J. Multi-omics analysis of a drug-induced model of bipolar disorder in zebrafish iScience 2023 26 106744106744