ZFIN Publication ID PubMed ID Authors Title Journal Year Volume Pages
ZDB-PUB-040721-6 15261836 Flores, M.V., Tsang, V.W., Hu, W., Kalev-Zylinska, M., Postlethwait, J., Crosier, P., Crosier, K., and Fisher, S. Duplicate zebrafish runx2 orthologues are expressed in developing skeletal elements Gene expression patterns : GEP 2004 4(5) 573-581
ZDB-PUB-050209-1 15689370 Yan, Y.L., Willoughby, J., Liu, D., Crump, J.G., Wilson, C., Miller, C.T., Singer, A., Kimmel, C., Westerfield, M., and Postlethwait, J.H. A pair of Sox: distinct and overlapping functions of zebrafish sox9 co-orthologs in craniofacial and pectoral fin development Development (Cambridge, England) 2005 132(5) 1069-1083
ZDB-PUB-050518-15 15894389 van der Meulen, T., Kranenbarg, S., Schipper, H., Samallo, J., van Leeuwen, J.L., and Franssen, H. Identification and characterisation of two runx2 homologues in zebrafish with different expression patterns BBA Gene Structure and Expression 2005 1729(2) 105-117
ZDB-PUB-050714-6 16007341 Pinto, J.P., Conceicao, N.M., Viegas, C.S., Leite, R.B., Hurst, L.D., Kelsh, R.N., and Cancela, M.L. Identification of a New pebp2alphaA2 Isoform From Zebrafish runx2 Capable of Inducing Osteocalcin Gene Expression In Vitro Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research 2005 20(8) 1440-1453
ZDB-PUB-060517-6 16678149 Walker, M.B., Miller, C.T., Talbot, J.C., Stock, D.W., and Kimmel, C.B. Zebrafish furin mutants reveal intricacies in regulating Endothelin1 signaling in craniofacial patterning Developmental Biology 2006 295(1) 194-205
ZDB-PUB-060911-7 16959242 Smith, A., Avaron, F., Guay, D., Padhi, B.K., and Akimenko, M.A. Inhibition of BMP signaling during zebrafish fin regeneration disrupts fin growth and scleroblast differentiation and function Developmental Biology 2006 299(2) 438-454
ZDB-PUB-061020-7 17011755 Hall, C., Flores, M.V., Murison, G., Crosier, K., and Crosier, P. An essential role for zebrafish Fgfrl1 during gill cartilage development Mechanisms of Development 2006 123(12) 925-940
ZDB-PUB-061020-9 17013873 Flores, M.V., Lam, E.Y., Crosier, P., and Crosier, K. A hierarchy of Runx transcription factors modulate the onset of chondrogenesis in craniofacial endochondral bones in zebrafish Developmental Dynamics : an official publication of the American Association of Anatomists 2006 235(11) 3166-3176
ZDB-PUB-061229-15 17180503 Renn, J., Winkler, C., Schartl, M., Fischer, R., and Goerlich, R. Zebrafish and medaka as models for bone research including implications regarding space-related issues Protoplasma 2006 229(2-4) 209-214
ZDB-PUB-070210-22 17239364 Walker, M.B., Miller, C.T., Swartz, M.E., Eberhart, J.K., and Kimmel, C.B. phospholipase C, beta 3 is required for Endothelin1 regulation of pharyngeal arch patterning in zebrafish Developmental Biology 2007 304(1) 194-207
ZDB-PUB-070513-4 17474117 Kerney, R., Gross, J.B., and Hanken, J. Runx2 is essential for larval hyobranchial cartilage formation in Xenopus laevis Developmental Dynamics : an official publication of the American Association of Anatomists 2007 236(6) 1650-1662
ZDB-PUB-080227-3 18246063 Flores, M.V., Lam, E.Y., Crosier, K.E., and Crosier, P.S. Osteogenic transcription factor Runx2 is a maternal determinant of dorsoventral patterning in zebrafish Nature cell biology 2008 10(3) 346-352
ZDB-PUB-080707-2 18590717 Sperber, S.M., and Dawid, I.B. barx1 is necessary for ectomesenchyme proliferation and osteochondroprogenitor condensation in the zebrafish pharyngeal arches Developmental Biology 2008 321(1) 101-110
ZDB-PUB-090204-3 19161246 Li, N., Felber, K., Elks, P., Croucher, P., and Roehl, H.H. Tracking gene expression during zebrafish osteoblast differentiation Developmental Dynamics : an official publication of the American Association of Anatomists 2009 238(2) 459-466
ZDB-PUB-090407-22 19347596 Haga, Y., Dominique, V.J. 3rd, and Du, S.J. Analyzing notochord segmentation and intervertebral disc formation using the twhh:gfp transgenic zebrafish model Transgenic Research 2009 18(5) 669-683
ZDB-PUB-090518-22 19442608 Chen, Y.H., Lin, Y.T., and Lee, G.H. Novel and unexpected functions of zebrafish CCAAT box binding transcription factor (NF-Y) B subunit during cartilages development Bone 2009 44(5) 777-784
ZDB-PUB-090616-16 19488987 Nakada, C., Iida, A., Tabata, Y., and Watanabe, S. Forkhead transcription factor foxe1 regulates chondrogenesis in zebrafish Journal of experimental zoology. Part B, Molecular and developmental evolution 2009 312(8) 827-840
ZDB-PUB-091023-63 19842180 Brown, A.M., Fisher, S., and Iovine, M.K. Osteoblast maturation occurs in overlapping proximal-distal compartments during fin regeneration in zebrafish Developmental Dynamics : an official publication of the American Association of Anatomists 2009 238(11) 2922-2928
ZDB-PUB-091215-20 19948063 Schwend, T., and Ahlgren, S.C. Zebrafish con/disp1 reveals multiple spatiotemporal requirements for Hedgehog-signaling in craniofacial development BMC Developmental Biology 2009 9 59
ZDB-PUB-091221-25 20014404 Chuang, H.N., Cheng, H.Y., Hsiao, K.M., Lin, C.W., Lin, M.L., and Pan, H. The zebrafish homeobox gene irxl1 is required for brain and pharyngeal arch morphogenesis Developmental Dynamics : an official publication of the American Association of Anatomists 2010 239(2) 639-650
ZDB-PUB-100119-24 20081187 Li, N., Kelsh, R.N., Croucher, P., and Roehl, H.H. Regulation of neural crest cell fate by the retinoic acid and Pparg signalling pathways Development (Cambridge, England) 2010 137(3) 389-394
ZDB-PUB-100317-28 20226781 Eames, B.F., Singer, A., Smith, G.A., Wood, Z.A., Yan, Y.L., He, X., Polizzi, S.J., Catchen, J.M., Rodriguez-Mari, A., Linbo, T., Raible, D.W., and Postlethwait, J.H. UDP xylose synthase 1 is required for morphogenesis and histogenesis of the craniofacial skeleton Developmental Biology 2010 341(2) 400-415
ZDB-PUB-101209-13 21126582 Felber, K., Croucher, P., and Roehl, H.H. Hedgehog signalling is required for perichondral osteoblast differentiation in zebrafish Mechanisms of Development 2011 128(1-2) 141-152
ZDB-PUB-110110-9 21196291 Zhao, H.B., Wang, W.W., Luo, Z.L., Cao, H.R., and Shi, Y.X. Overexpression of p204 leads to abnormal embryos and osteogenesis in zebrafish Frontiers in bioscience : a journal and virtual library 2011 3 115-124
ZDB-PUB-110204-3 20236534 Marcellini, S., Bruna, C., Henríquez, J.P., Albistur, M., Reyes, A.E., Barriga, E.H., Henríquez, B., and Montecino, M. Evolution of the interaction between Runx2 and VDR, two transcription factors involved in osteoblastogenesis BMC Evolutionary Biology 2010 10 78
ZDB-PUB-110317-25 21372136 Shin, M.K., Jang, Y.H., Yoo, H.J., Kang, D.W., Park, M.H., Kim, M.K., Seo, D.S., Kim, S.D., Min, G., Rhyu, H.K., Bae, Y.S., and Min, D.S. N-Formyl-Methionyl-Leucyl-Phenylalanine (fMLP) Promotes Osteoblast Differentiation via the N-Formyl Peptide Receptor 1-mediated Signaling Pathway in Human Mesenchymal Stem Cells from Bone Marrow The Journal of biological chemistry 2011 286(19) 17133-43
ZDB-PUB-110524-34 21571227 Knopf, F., Hammond, C., Chekuru, A., Kurth, T., Hans, S., Weber, C.W., Mahatma, G., Fisher, S., Brand, M., Schulte-Merker, S., and Weidinger, G. Bone Regenerates via Dedifferentiation of Osteoblasts in the Zebrafish Fin Developmental Cell 2011 20(5) 713-724
ZDB-PUB-110914-16 21901110 Eames, B.F., Yan, Y.L., Swartz, M.E., Levic, D.S., Knapik, E.W., Postlethwait, J.H., and Kimmel, C.B. Mutations in fam20b and xylt1 Reveal That Cartilage Matrix Controls Timing of Endochondral Ossification by Inhibiting Chondrocyte Maturation PLoS Genetics 2011 7(8) e1002246
ZDB-PUB-111117-4 22046029 Petrey, A.C., Flanagan-Steet, H., Johnson, S., Fan, X., De la Rosa, M., Haskins, M.E., Nairn, A.V., Moremen, K.W., and Steet, R. Excessive activity of cathepsin K is associated with the cartilage defects in a zebrafish model for mucolipidosis II Disease models & mechanisms 2012 5(2) 177-190
ZDB-PUB-111122-21 22087291 Yang, D.C., Tsai, C.C., Liao, Y.F., Fu, H.C., Tsay, H.J., Huang, T.F., Chen, Y.H., and Hung, S.C. Twist controls skeletal development and dorsoventral patterning by regulating runx2 in zebrafish PLoS One 2011 6(11) e27324
ZDB-PUB-120309-3 22390748 Eames, B.F., Amores, A., Yan, Y.L., and Postlethwait, J.H. Evolution of the osteoblast: Skeletogenesis in gar and zebrafish BMC Evolutionary Biology 2012 12(1) 27
ZDB-PUB-120529-38 22623957 Chu, C.Y., Chen, C.F., Rajendran, R.S., Shen, C.N., Chen, T.H., Yen, C.C., Chuang, C.K., Lin, D.S., and Hsiao, C.D. Overexpression of akt1 enhances adipogenesis and leads to lipoma formation in zebrafish PLoS One 2012 7(5) e36474
ZDB-PUB-120529-44 22627283 Huycke, T.R., Eames, B.F., and Kimmel, C.B. Hedgehog-dependent proliferation drives modular growth during morphogenesis of a dermal bone Development (Cambridge, England) 2012 139(13) 2371-2380
ZDB-PUB-120706-19 22761277 Yan, Y.L., Bhattacharya, P., He, X., Ponugoti, B., Marquardt, B., Layman, J., Grunloh, M., Postlethwait, J.H., and Rubin, D. Duplicated zebrafish co-orthologs of parathyroid hormone-related peptide (PTHrP, Pthlh) play different roles in craniofacial skeletogenesis The Journal of endocrinology 2012 214(3) 421-435
ZDB-PUB-121102-28 23091072 Jayasena, C.S., and Bronner, M.E. Rbms3 functions in craniofacial development by posttranscriptionally modulating TGF-β signaling The Journal of cell biology 2012 199(3) 453-466
ZDB-PUB-121206-47 23209659 Dalcq, J., Pasque, V., Ghaye, A., Larbuisson, A., Motte, P., Martial, J.A., and Muller, M. RUNX3, EGR1 and SOX9B Form a Regulatory Cascade Required to Modulate BMP-Signaling during Cranial Cartilage Development in Zebrafish PLoS One 2012 7(11) e50140
ZDB-PUB-121210-2 23213226 Ma, D., Wang, L., Wang, S., Gao, Y., Wei, Y., and Liu, F. Foxn1 maintains thymic epithelial cells to support T-cell development via mcm2 in zebrafish Proceedings of the National Academy of Sciences of the United States of America 2012 109(51) 21040-21045
ZDB-PUB-130322-29 23462472 Grotek, B., Wehner, D., and Weidinger, G. Notch signaling coordinates cellular proliferation with differentiation during zebrafish fin regeneration Development (Cambridge, England) 2013 140(7) 1412-1423
ZDB-PUB-130927-13 24040141 van der Velden, Y.U., Wang, L., Querol Cano, L., and Haramis, A.P. The polycomb group protein ring1b/rnf2 is specifically required for craniofacial development PLoS One 2013 8(9) e73997
ZDB-PUB-131122-12 24176552 Larbuisson, A., Dalcq, J., Martial, J.A., and Muller, M. Fgf receptors Fgfr1a and Fgfr2 control the function of pharyngeal endoderm in late cranial cartilage development Differentiation; research in biological diversity 2013 86(4-5) 192-206
ZDB-PUB-140130-9 24317199 Varga, M., Sass, M., Papp, D., Takács-Vellai, K., Kobolak, J., Dinnyés, A., Klionsky, D.J., and Vellai, T. Autophagy is required for zebrafish caudal fin regeneration Cell death and differentiation 2014 21(4) 547-56
ZDB-PUB-140317-28 24414856 Chen, B., Yan, Y.L., Liu, C., Bo, L., Li, G.F., Wang, H., and Xu, Y.J. Therapeutic effect of deferoxamine on iron overload-induced inhibition of osteogenesis in a zebrafish model Calcified tissue international 2014 94(3) 353-360
ZDB-PUB-140513-213 24699678 Nah, G.S., Lim, Z.W., Tay, B.H., Osato, M., Venkatesh, B. Runx family genes in a cartilaginous fish, the elephant shark (Callorhinchus milii) PLoS One 2014 9 e93816
ZDB-PUB-140513-351 24628984 Wiweger, M.I., de Andrea, C.E., Scheepstra, K.W., Zhao, Z., Hogendoorn, P.C. Possible effects of EXT2 on mesenchymal differentiation--lessons from the zebrafish Orphanet journal of rare diseases 2014 9 35
ZDB-PUB-140514-1 24821985 Geurtzen, K., Knopf, F., Wehner, D., Huitema, L.F., Schulte-Merker, S., Weidinger, G. Mature osteoblasts dedifferentiate in response to traumatic bone injury in the zebrafish fin and skull Development (Cambridge, England) 2014 141(11) 2225-34
ZDB-PUB-140527-6 24858471 Heude, E., Shaikho, S., Ekker, M. The dlx5a/dlx6a Genes Play Essential Roles in the Early Development of Zebrafish Median Fin and Pectoral Structures PLoS One 2014 9 e98505
ZDB-PUB-141019-3 25326392 Zancan, I., Bellesso, S., Costa, R., Salvalaio, M., Stroppiano, M., Hammond, C., Argenton, F., Filocamo, M., Moro, E. Glucocerebrosidase deficiency in zebrafish affects primary bone ossification through increased oxidative stress and reduced Wnt/β-catenin signaling Human molecular genetics 2015 24(5) 1280-94
ZDB-PUB-150127-10 25617839 Merkes, C., Turkalo, T.K., Wilder, N., Park, H., Wenger, L.W., Lewin, S.J., Azuma, M. Ewing Sarcoma Ewsa Protein Regulates Chondrogenesis of Meckel's Cartilage through Modulation of Sox9 in Zebrafish PLoS One 2015 10 e0116627
ZDB-PUB-150226-12 25711857 Wincent, E., Stegeman, J.J., Jönsson, M.E. Combination effects of AHR agonists and Wnt/β-catenin modulators in zebrafish embryos: Implications for physiological and toxicological AHR functions Toxicology and applied pharmacology 2015 284(2) 163-79
ZDB-PUB-150611-5 26061167 Aceto, J., Nourizadeh-Lillabadi, R., Marée, R., Dardenne, N., Jeanray, N., Wehenkel, L., Aleström, P., van Loon, J.J., Muller, M. Zebrafish Bone and General Physiology Are Differently Affected by Hormones or Changes in Gravity PLoS One 2015 10 e0126928
ZDB-PUB-150809-6 26253409 Blum, N., Begemann, G. Osteoblast de- and redifferentiation is controlled by a dynamic response to retinoic acid during zebrafish fin regeneration Development (Cambridge, England) 2015 142(17) 2894-903
ZDB-PUB-150909-6 26347317 Fraher, D., Hodge, J.M., Collier, F.M., McMillan, J.S., Kennedy, R.L., Ellis, M., Nicholson, G.C., Walder, K., Dodd, S., Berk, M., Pasco, J.A., Williams, L.J., Gibert, Y. Citalopram and sertraline exposure compromises embryonic bone development Molecular psychiatry 2016 21(5) 656-64
ZDB-PUB-151216-21 26657540 Kim, Y.I., No Lee, J., Bhandari, S., Nam, I.K., Yoo, K.W., Kim, S.J., Oh, G.S., Kim, H.J., So, H.S., Choe, S.K., Park, R. Cartilage development requires the function of Estrogen-related receptor alpha that directly regulates sox9 expression in zebrafish Scientific Reports 2015 5 18011
ZDB-PUB-151223-8 26689368 Felber, K., Elks, P.M., Lecca, M., Roehl, H.H. Expression of osterix Is Regulated by FGF and Wnt/β-Catenin Signalling during Osteoblast Differentiation PLoS One 2015 10 e0144982
ZDB-PUB-160207-5 26850473 Suzuki, N., Hanmoto, T., Yano, S., Furusawa, Y., Ikegame, M., Tabuchi, Y., Kondo, T., Kitamura, K.I., Endo, M., Yamamoto, T., Sekiguchi, T., Urata, M., Mikuni-Takagaki, Y., Hattori, A. Low-intensity pulsed ultrasound induces apoptosis in osteoclasts: Fish scales are a suitable model for the analysis of bone metabolism by ultrasound Comparative biochemistry and physiology. Part A, Molecular & integrative physiology 2016 195 26-31
ZDB-PUB-160310-20 Milligan, B., Harris, N., Franz-Odendaal, T. A. Understanding morphology: a comparative study on the lower jaw in two teleost species Zeitschrift fur angewandte Ichthyologie = Journal of applied ichthyology 2012 28(3) 346-352
ZDB-PUB-160320-10 26992365 Kague, E., Roy, P., Asselin, G., Hu, G., Stanley, A., Albertson, C., Simonet, J., Fisher, S. Osterix/sp7 limits cranial bone initiation sites and is required for formation of sutures Developmental Biology 2016 413(2) 160-72
ZDB-PUB-160414-8 27069811 Pashay Ahi, E., Walker, B.S., Lassiter, C.S., Jónsson, Z.O. Investigation of the effects of estrogen on skeletal gene expression during zebrafish larval head development PeerJ 2016 4 e1878
ZDB-PUB-160429-9 27122168 Paul, S., Schindler, S., Giovannone, D., de Millo Terrazzani, A., Mariani, F.V., Crump, J.G. Ihha induces hybrid cartilage-bone cells during zebrafish jawbone regeneration Development (Cambridge, England) 2016 143(12) 2066-76
ZDB-PUB-160529-8 27233600 Jiang, Y., Yan, Y., Wang, X., Zhu, G., Xu, Y.J. Hepcidin inhibition on the effect of osteogenesis in zebrafish Biochemical and Biophysical Research Communications 2016 476(1) 1-6
ZDB-PUB-160623-11 27329031 Macaulay, L.J., Chernick, M., Chen, A., Hinton, D.E., Bailey, J.M., Kullman, S.W., Levin, E.D., Stapleton, H.M. Exposure to a PBDE/OH-BDE mixture alters juvenile zebrafish (Danio rerio) development Environmental toxicology and chemistry 2017 36(1) 36-48
ZDB-PUB-161110-19 27821592 Niu, N., Shao, R., Yan, G., Zou, W. Bromodomain and Extra-terminal Proteins (BET) Inhibitors Suppress Chondrocyte Differentiation and Restrain Bone Growth The Journal of biological chemistry 2016 291(52) 26647-26657
ZDB-PUB-161110-2 27829009 Topczewska, J.M., Shoela, R.A., Tomaszewski, J.P., Mirmira, R.B., Gosain, A.K. The Morphogenesis of Cranial Sutures in Zebrafish PLoS One 2016 11 e0165775
ZDB-PUB-161221-8 27993976 Chiba, A., Watanabe-Takano, H., Terai, K., Fukui, H., Miyazaki, T., Uemura, M., Hashimoto, H., Hibi, M., Fukuhara, S., Mochizuki, N. Osteocrin, a peptide secreted from the heart and other tissues, contributes to cranial osteogenesis and chondrogenesis in zebrafish Development (Cambridge, England) 2017 144(2) 334-344
ZDB-PUB-170202-7 26950095 Braasch, I., Gehrke, A.R., Smith, J.J., Kawasaki, K., Manousaki, T., Pasquier, J., Amores, A., Desvignes, T., Batzel, P., Catchen, J., Berlin, A.M., Campbell, M.S., Barrell, D., Martin, K.J., Mulley, J.F., Ravi, V., Lee, A.P., Nakamura, T., Chalopin, D., Fan, S., Wcisel, D., Cañestro, C., Sydes, J., Beaudry, F.E., Sun, Y., Hertel, J., Beam, M.J., Fasold, M., Ishiyama, M., Johnson, J., Kehr, S., Lara, M., Letaw, J.H., Litman, G.W., Litman, R.T., Mikami, M., Ota, T., Saha, N.R., Williams, L., Stadler, P.F., Wang, H., Taylor, J.S., Fontenot, Q., Ferrara, A., Searle, S.M., Aken, B., Yandell, M., Schneider, I., Yoder, J.A., Volff, J.N., Meyer, A., Amemiya, C.T., Venkatesh, B., Holland, P.W., Guiguen, Y., Bobe, J., Shubin, N.H., Di Palma, F., Alföldi, J., Lindblad-Toh, K., Postlethwait, J.H. The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons Nature Genetics 2016 48(4) 427-37
ZDB-PUB-170204-7 28148780 Suarez-Bregua, P., Torres-Nuñez, E., Saxena, A., Guerreiro, P., Braasch, I., Prober, D.A., Moran, P., Cerda-Reverter, J.M., Du, S.J., Adrio, F., Power, D.M., Canario, A.V., Postlethwait, J.H., Bronner, M.E., Cañestro, C., Rotllant, J. Pth4, an ancient parathyroid hormone lost in eutherian mammals, reveals a new brain-to-bone signaling pathway FASEB journal : official publication of the Federation of American Societies for Experimental Biology 2017 31 569-583
ZDB-PUB-170206-6 28158191 Zhang, Y., Huang, H., Zhao, G., Yokoyama, T., Vega, H., Huang, Y., Sood, R., Bishop, K., Maduro, V., Accardi, J., Toro, C., Boerkoel, C.F., Lyons, K., Gahl, W.A., Duan, X., Malicdan, M.C., Lin, S. ATP6V1H Deficiency Impairs Bone Development through Activation of MMP9 and MMP13 PLoS Genetics 2017 13 e1006481
ZDB-PUB-170214-96 26469318 Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. RFX transcription factors are essential for hearing in mice Nature communications 2015 6 8549
ZDB-PUB-170406-2 28380670 Carvalho, F.R., Fernandes, A.R., Cancela, M.L., Gavaia, P.J. Improved regeneration and de novo bone formation in a diabetic zebrafish model treated with Paricalcitol and Cinacalcet Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society 2017 25(3) 432-442
ZDB-PUB-170621-12 28625871 Kara, N., Wei, C., Commanday, A.C., Patton, J.G. miR-27 regulates chondrogenesis by suppressing Focal Adhesion Kinase during pharyngeal arch development Developmental Biology 2017 429(1) 321-334
ZDB-PUB-170624-7 28642734 Yokokura, T., Kamei, H., Shibano, T., Yamanaka, D., Sawada-Yamaguchi, R., Hakuno, F., Takahashi, S.I., Shimizu, T. The Short-Stature Homeobox-Containing Gene (shox/SHOX) Is Required for the Regulation of Cell Proliferation and Bone Differentiation in Zebrafish Embryo and Human Mesenchymal Stem Cells. Frontiers in endocrinology 2017 8 125
ZDB-PUB-170805-13 28771888 Geurtzen, K., Vernet, A., Freidin, A., Rauner, M., Hofbauer, L.C., Schneider, J.E., Brand, M., Knopf, F. Immune suppressive and bone inhibitory effects of prednisolone in growing and regenerating zebrafish tissues Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research 2017 32(12) 2476-2488
ZDB-PUB-171019-16 29040309 Suarez-Bregua, P., Saxena, A., Bronner, M.E., Rotllant, J. Targeted Pth4-expressing cell ablation impairs skeletal mineralization in zebrafish PLoS One 2017 12 e0186444
ZDB-PUB-171204-25 29186901 Chen, J.R., Lai, Y.H., Tsai, J.J., Hsiao, C.D. Live Fluorescent Staining Platform for Drug-Screening and Mechanism-Analysis in Zebrafish for Bone Mineralization Molecules 2017 22(12)
ZDB-PUB-180418-12 29635908 He, H., Wang, C., Tang, Q., Yang, F., Xu, Y. Possible mechanisms of prednisolone-induced osteoporosis in zebrafish larva Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 2018 101 981-987
ZDB-PUB-180424-9 29684692 Zhao, Y., Liu, Y., Sun, J., Sha, H., Yang, Y., Ye, Q., Yang, Q., Huang, B., Yu, Y., Huang, H. Acute toxic responses of embryo-larval zebrafish to zinc pyrithione (ZPT) reveal embryological and developmental toxicity Chemosphere 2018 205 62-70
ZDB-PUB-180513-6 29752384 McMillan, S.C., Zhang, J., Phan, H.E., Jeradi, S., Probst, L., Hammerschmidt, M., Akimenko, M.A. A regulatory pathway involving retinoic acid and calcineurin demarcates and maintains joint cells and osteoblasts in the fin regenerate Development (Cambridge, England) 2018 145(11)
ZDB-PUB-180520-1 29777011 Xu, P., Balczerski, B., Ciozda, A., Louie, K., Oralova, V., Huysseune, A., Crump, J.G. Fox proteins are modular competency factors for facial cartilage and tooth specification Development (Cambridge, England) 2018 145(12)
ZDB-PUB-180626-10 29940513 Laizé, V., Gavaia, P.J., Tarasco, M., Viegas, M.N., Caria, J., Luis, N., Cancela, M.L. Osteotoxicity of 3-methylcholanthrene in fish Ecotoxicology and environmental safety 2018 161 721-728
ZDB-PUB-180731-6 30058326 Makkar, H., Verma, S.K., Panda, P.K., Jha, E., Das, B., Mukherjee, K., Suar, M. In vivo molecular toxicity profile of dental bioceramics in embryonic Zebrafish (Danio rerio) Chemical Research in Toxicology 2018 31(9) 914-923
ZDB-PUB-181027-6 30361820 Jiang, Y., Chen, B., Yan, Y., Zhu, G.X. Hepcidin protects against iron overload-induced inhibition of bone formation in zebrafish Fish physiology and biochemistry 2018 45(1) 365-374
ZDB-PUB-181115-3 30424580 Sen, R., Pezoa, S.A., Carpio Shull, L., Hernandez-Lagunas, L., Niswander, L.A., Artinger, K.B. Kat2a and Kat2b Acetyltransferase Activity Regulates Craniofacial Cartilage and Bone Differentiation in Zebrafish and Mice Journal of developmental biology 2018 6(4)
ZDB-PUB-190116-6 30643696 DeLaurier, A., Alvarez, C.L., Wiggins, K.J. hdac4 mediates perichondral ossification and pharyngeal skeleton development in the zebrafish PeerJ 2019 7 e6167
ZDB-PUB-190221-9 30785394 Giovannone, D., Paul, S., Schindler, S., Arata, C., Farmer, D.T., Patel, P., Smeeton, J., Crump, J.G. Programmed conversion of hypertrophic chondrocytes into osteoblasts and marrow adipocytes within zebrafish bones eLIFE 2019 8
ZDB-PUB-190406-5 30947959 Fathi, E., Farahzadi, R., Sheikhzadeh, N. Immunophenotypic characterization, multi-lineage differentiation and aging of zebrafish heart and liver tissue-derived mesenchymal stem cells as a novel approach in stem cell-based therapy Tissue & Cell 2019 57 15-21
ZDB-PUB-190413-4 30976283 Seda, M., Geerlings, M., Lim, P., Jeyabalan-Srikaran, J., Cichon, A.C., Scambler, P.J., Beales, P.L., Hernandez-Hernandez, V., Stoker, A.W., Jenkins, D. An FDA-Approved Drug Screen for Compounds Influencing Craniofacial Skeletal Development and Craniosynostosis Molecular Syndromology 2019 10 98-114
ZDB-PUB-190418-16 30992325 Hu, Z., Chen, B., Zhao, Q. Hedgehog signaling regulates osteoblast differentiation in zebrafish larvae through modulation of autophagy Biology Open 2019 8(5)
ZDB-PUB-190625-6 31231513 Seda, M., Peskett, E., Demetriou, C., Bryant, D., Moore, G.E., Stanier, P., Jenkins, D. Analysis of transgenic zebrafish expressing the Lenz-Majewski syndrome gene PTDSS1 in skeletal cell lineages F1000Research 2019 8 273
ZDB-PUB-190627-13 31238190 Granadeiro, L., Dirks, R.P., Ortiz-Delgado, J.B., Gavaia, P.J., Sarasquete, C., Laizé, V., Cancela, M.L., Fernández, I. Warfarin-exposed zebrafish embryos resembles human warfarin embryopathy in a dose and developmental-time dependent manner - From molecular mechanisms to environmental concerns Ecotoxicology and environmental safety 2019 181 559-571
ZDB-PUB-190729-1 31344827 Liang, S.T., Chen, J.R., Tsai, J.J., Lai, Y.H., Hsiao, C.D. Overexpression of Notch Signaling Induces Hyperosteogeny in Zebrafish International Journal of Molecular Sciences 2019 20(15)
ZDB-PUB-190902-20 31471293 Gebuijs, I.G.E., Raterman, S.T., Metz, J.R., Swanenberg, L., Zethof, J., Van den Bos, R., Carels, C.E.L., Wagener, F.A.D.T.G., Von den Hoff, J.W. Fgf8a mutation affects craniofacial development and skeletal gene expression in zebrafish larvae Biology Open 2019 8(9)
ZDB-PUB-190906-4 31487071 Li, L., Zhang, J., Akimenko, M.A. Inhibition of mmp13a during zebrafish fin regeneration disrupts fin growth, osteoblasts differentiation and Laminin organization Developmental Dynamics : an official publication of the American Association of Anatomists 2019 249(2) 187-198
ZDB-PUB-190912-13 31509740 Singh, A.P., Sosa, M.X., Fang, J., Shanmukhappa, S.K., Hubaud, A., Fawcett, C.H., Molind, G.J., Tsai, T., Capodieci, P., Wetzel, K., Sanchez, E., Wang, G., Coble, M., Tang, W., Cadena, S.M., Fishman, M.C., Glass, D.J. αKlotho Regulates Age-Associated Vascular Calcification and Lifespan in Zebrafish Cell Reports 2019 28 2767-2776.e5
ZDB-PUB-191023-6 31636113 Brandão, A.S., Bensimon-Brito, A., Lourenço, R., Borbinha, J., Soares, A.R., Jacinto, A. Yap induces osteoblast differentiation by modulating Bmp signalling during zebrafish caudal fin regeneration Journal of Cell Science 2019 132(22)
ZDB-PUB-191110-2 31698882 Molagoda, I.M.N., Karunarathne, W.A.H.M., Choi, Y.H., Park, E.K., Jeon, Y.J., Lee, B.J., Kang, C.H., Kim, G.Y. Fermented Oyster Extract Promotes Osteoblast Differentiation by Activating the Wnt/β-Catenin Signaling Pathway, Leading to Bone Formation Biomolecules 2019 9(11)
ZDB-PUB-191123-9 31755053 Hodkovicova, N., Sehonova, P., Blahova, J., Faldyna, M., Marsalek, P., Mikula, P., Chloupek, P., Dobsikova, R., Vecerek, V., Vicenova, M., Vosmerova, P., Svobodova, Z. The effect of the antidepressant venlafaxine on gene expression of biotransformation enzymes in zebrafish (Danio rerio) embryos Environmental science and pollution research international 2019 27(2) 1686-1696
ZDB-PUB-200110-18 31918107 Pu, S.Y., Hamid, N., Ren, Y.W., Pei, D.S. Effects of phthalate acid esters on zebrafish larvae: Development and skeletal morphogenesis Chemosphere 2019 246 125808
ZDB-PUB-200212-13 32044379 Shull, L.C., Sen, R., Menzel, J., Goyama, S., Kurokawa, M., Artinger, K.B. The conserved and divergent roles of Prdm3 and Prdm16 in zebrafish and mouse craniofacial development Developmental Biology 2020 461(2) 132-144
ZDB-PUB-200212-17 32044718 Jiang, Y., Lu, Y., Jiang, X., Hu, J., Li, R., Liu, Y., Zhu, G., Rong, X. Glucocorticoids induce osteoporosis mediated by glucocorticoid receptor-dependent and -independent pathways Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 2020 125 109979
ZDB-PUB-200403-63 32168858 Valenti, M.T., Marchetto, G., Perduca, M., Tiso, N., Mottes, M., Dalle Carbonare, L. BEL β-Trefoil Reduces the Migration Ability of RUNX2 Expressing Melanoma Cells in Xenotransplanted Zebrafish Molecules 2020 25(6)
ZDB-PUB-200716-8 32668265 Gebuijs, I.G.E., Metz, J.R., Zethof, J., Carels, C.E.L., Wagener, F.A.D.T.G., Von den Hoff, J.W. The anti-epileptic drug valproic acid causes malformations in the developing craniofacial skeleton of zebrafish larvae Mechanisms of Development 2020 163 103632
ZDB-PUB-200721-3 32686823 Okada, K., Takase, R., Hamaoka, Y., Honda, A., Ikeda, A., Hokazono, Y., Maeda, Y., Hayasaka, O., Kotani, T., Komatsu, M., Shiozaki, K. Establishment and characterization of Neu1-knockout zebrafish and its abnormal clinical phenotypes The Biochemical journal 2020 477(15) 2841-2857
ZDB-PUB-201002-113 32958671 Barske, L., Fabian, P., Hirschberger, C., Jandzik, D., Square, T., Xu, P., Nelson, N., Yu, H.V., Medeiros, D.M., Gillis, J.A., Crump, J.G. Evolution of vertebrate gill covers via shifts in an ancient Pou3f3 enhancer Proceedings of the National Academy of Sciences of the United States of America 2020 117(40) 24876-24884
ZDB-PUB-201020-32 33061816 Jia, S., Wu, X., Wu, Y., Cui, X., Tao, B., Zhu, Z., Hu, W. Multiple Developmental Defects in sox11a Mutant Zebrafish with Features of Coffin-Siris Syndrome International journal of biological sciences 2020 16 3039-3049
ZDB-PUB-201208-19 33272268 Zhao, Y., Shang, D., Ying, R., Cheng, H., Zhou, R. An optimized base editor with efficient C-to-T base editing in zebrafish BMC Biology 2020 18 190
ZDB-PUB-210101-6 33376206 Cao, Z., Meng, Y., Gong, F., Xu, Z., Liu, F., Fang, M., Zou, L., Liao, X., Wang, X., Luo, L., Li, X., Lu, H. Calcineurin controls proximodistal blastema polarity in zebrafish fin regeneration Proceedings of the National Academy of Sciences of the United States of America 2021 118(2)
ZDB-PUB-210227-9 33635072 Peng, W., Zhang, W., Wu, Q., Cai, S., Jia, T., Sun, J., Lin, Z., Alitongbieke, G., Chen, Y., Su, Y., Lin, J., Cai, L., Sun, Y., Pan, Y., Xue, Y. Agaricus bisporus-Derived Glucosamine Hydrochloride Facilitates Skeletal Injury Repair through Bmp Signaling in Zebrafish Osteoporosis Model Journal of natural products 2021 84(4) 1294-1305
ZDB-PUB-210316-19 33720362 Gilbert, M.C., Tetrault, E., Packard, M., Navon, D., Albertson, R.C. Ciliary rootlet coiled-coil 2 (crocc2) is associated with evolutionary divergence and plasticity of cichlid jaw shape Molecular Biology and Evolution 2021 38(8) 3078-3092
ZDB-PUB-210608-2 34090529 Carbonare, L.D., Bertacco, J., Marchetto, G., Cheri, S., Deiana, M., Minoia, A., Tiso, N., Mottes, M., Valenti, M.T. Methylsulfonylmethane enhances MSC chondrogenic commitment and promotes pre-osteoblasts formation Stem Cell Research & Therapy 2021 12 326
ZDB-PUB-210714-31 34256044 Molagoda, I.M.N., Kang, C.H., Lee, M.H., Choi, Y.H., Lee, C.M., Lee, S., Kim, G.Y. Fisetin promotes osteoblast differentiation and osteogenesis through GSK-3β phosphorylation at Ser9 and consequent β-catenin activation, inhibiting osteoporosis Biochemical pharmacology 2021 192 114676
ZDB-PUB-220112-7 35013168 Fabian, P., Tseng, K.C., Thiruppathy, M., Arata, C., Chen, H.J., Smeeton, J., Nelson, N., Crump, J.G. Lifelong single-cell profiling of cranial neural crest diversification in zebrafish Nature communications 2022 13 13
ZDB-PUB-220311-18 35267311 Molagoda, I.M.N., Athapaththu, A.M.G.K., Park, E.K., Choi, Y.H., Jeon, Y.J., Kim, G.Y. Fermented Oyster (Crassostrea gigas) Extract Cures and Prevents Prednisolone-Induced Bone Resorption by Activating Osteoblast Differentiation Foods (Basel, Switzerland) 2022 11(5)
ZDB-PUB-220412-6 35398497 Xu, P., Lin, B., Deng, X., He, S., Chen, N., Wang, N. Anti-osteoporosis effects of Anemarrhenae Rhizoma / Phellodendri Chinensis Cortex herb pair and its major active components in diabetic rats and zebrafish Journal of ethnopharmacology 2022 293 115269
ZDB-PUB-220413-4 35406651 El Fersioui, Y., Pinton, G., Allaman-Pillet, N., Schorderet, D.F. Premature Vertebral Mineralization in hmx1-Mutant Zebrafish Cells 2022 11(7)
ZDB-PUB-220506-24 35512469 Liu, S., Wang, L., Chen, K., Yang, H., Ling, M., Wu, L., Zhou, X., Ma, G., Bai, L. Combined effects of S-metolachlor and benoxacor on embryo development in zebrafish (Danio rerio) Ecotoxicology and environmental safety 2022 238 113565
ZDB-PUB-220515-9 35563140 Sojan, J.M., Raman, R., Muller, M., Carnevali, O., Renn, J. Probiotics Enhance Bone Growth and Rescue BMP Inhibition: New Transgenic Zebrafish Lines to Study Bone Health International Journal of Molecular Sciences 2022 23(9)
ZDB-PUB-220518-3 35577882 Sojan, J.M., Gioacchini, G., Giorgini, E., Orlando, P., Tiano, L., Maradonna, F., Carnevali, O. Zebrafish caudal fin as a model to investigate the role of probiotics in bone regeneration Scientific Reports 2022 12 8057
ZDB-PUB-220527-11 35616518 Wang, F., Rong, P., Wang, J., Yu, X., Wang, N., Wang, S., Xue, Z., Chen, J., Meng, W., Peng, X. Anti-osteoporosis effects and regulatory mechanism of Lindera aggregata based on network pharmacology and experimental validation Food & function 2022 13(11) 6419-6432
ZDB-PUB-220603-4 35652047 Dalle Carbonare, L., Bertacco, J., Gaglio, S.C., Minoia, A., Cominacini, M., Cheri, S., Deiana, M., Marchetto, G., Bisognin, A., Gandini, A., Antoniazzi, F., Perduca, M., Mottes, M., Valenti, M.T. Fisetin: An Integrated Approach to Identify a Strategy Promoting Osteogenesis Frontiers in pharmacology 2022 13 890693
ZDB-PUB-220629-7 35762670 Dash, S., Trainor, P.A. Nucleolin loss of function leads to aberrant Fibroblast Growth Factor signaling and craniofacial anomalies Development (Cambridge, England) 2022 149(12)
ZDB-PUB-220722-24 35863613 Peng, C.H., Lin, W.Y., Li, C.Y., Dharini, K.K., Chang, C.Y., Hong, J.T., Lin, M.D. Gu Sui Bu (Drynaria fortunei J. Sm.) antagonizes glucocorticoid-induced mineralization reduction in zebrafish larvae by modulating the activity of osteoblasts and osteoclasts Journal of ethnopharmacology 2022 297 115565
ZDB-PUB-220824-16 35993337 Brandão, A.S., Borbinha, J., Pereira, T., Brito, P.H., Lourenço, R., Bensimon-Brito, A., Jacinto, A. A regeneration-triggered metabolic adaptation is necessary for cell identity transitions and cell cycle re-entry to support blastema formation and bone regeneration eLIFE 2022 11
ZDB-PUB-221021-10 36265687 Norcross, R.G., Abdelmoti, L., Rouchka, E.C., Andreeva, K., Tussey, O., Landestoy, D., Galperin, E. Shoc2 controls ERK1/2-driven neural crest development by balancing components of the extracellular matrix Developmental Biology 2022 492 156-171
ZDB-PUB-221105-6 36332886 Wu, Y., Sun, A., Nie, C., Gao, Z.X., Wan, S.M. Functional differentiation of bmp2a and bmp2b genes in zebrafish Gene expression patterns : GEP 2022 46 119288
ZDB-PUB-221130-2 36444384 Gebuijs, L., Wagener, F.A., Zethof, J., Carels, C.E., Von den Hoff, J.W., Metz, J.R. Targeting fibroblast growth factor receptors causes severe craniofacial malformations in zebrafish larvae PeerJ 2022 10 e14338e14338
ZDB-PUB-221209-13 36478733 Nie, C.H., Wan, S.M., Chen, Y.L., Huysseune, A., Wu, Y.M., Zhou, J.J., Hilsdorf, A.W.S., Wang, W.M., Witten, P.E., Lin, Q., Gao, Z.X. Single-cell transcriptomes and runx2b-/- mutants reveal the genetic signatures of intermuscular bone formation in zebrafish National science review 2022 9 nwac152nwac152
ZDB-PUB-221212-15 36500990 Poudel, S., Martins, G., Cancela, M.L., Gavaia, P.J. Regular Supplementation with Antioxidants Rescues Doxorubicin-Induced Bone Deformities and Mineralization Delay in Zebrafish Nutrients 2022 14(23)
ZDB-PUB-230105-5 36599933 Guo, W., Jin, P., Li, R., Huang, L., Liu, Z., Li, H., Zhou, T., Fang, B., Xia, L. Dynamic network biomarker identifies cdkn1a-mediated bone mineralization in the triggering phase of osteoporosis Experimental & molecular medicine 2023 55(1) 81-94
ZDB-PUB-230330-39 36978831 Yu, L., Li, X., He, M., Wang, Q., Chen, C., Li, F., Li, B., Li, L. Antioxidant Carboxymethyl Chitosan Carbon Dots with Calcium Doping Achieve Ultra-Low Calcium Concentration for Iron-Induced Osteoporosis Treatment by Effectively Enhancing Calcium Bioavailability in Zebrafish Antioxidants (Basel, Switzerland) 2023 12(3)
ZDB-PUB-230331-44 36994096 Raterman, S.T., Von Den Hoff, J.W., Dijkstra, S., De Vriend, C., Te Morsche, T., Broekman, S., Zethof, J., De Vrieze, E., Wagener, F.A.D.T.G., Metz, J.R. Disruption of the foxe1 gene in zebrafish reveals conserved functions in development of the craniofacial skeleton and the thyroid Frontiers in cell and developmental biology 2023 11 11438441143844
ZDB-PUB-230427-56 37100808 Seda, M., Crespo, B., Corcelli, M., Osborn, D.P., Jenkins, D. A CRISPR/Cas9-generated mutation in the zebrafish orthologue of PPP2R3B causes idiopathic scoliosis Scientific Reports 2023 13 67836783
ZDB-PUB-230620-39 37336269 Daponte, V., Tonelli, F., Masiero, C., Syx, D., Exbrayat-Héritier, C., Biggiogera, M., Willaert, A., Rossi, A., Coucke, P.J., Ruggiero, F., Forlino, A. Cell differentiation and matrix organization are differentially affected during bone formation in osteogenesis imperfecta zebrafish models with different genetic defects impacting collagen type I structure Matrix biology : journal of the International Society for Matrix Biology 2023 121 105-126
ZDB-PUB-230910-57 37685971 Dalle Carbonare, L., Minoia, A., Braggio, M., Bertacco, J., Piritore, F.C., Zouari, S., Vareschi, A., Elia, R., Vedovi, E., Scumà, C., Carlucci, M., Bhandary, L., Mottes, M., Romanelli, M.G., Valenti, M.T. Modulation of miR-146b Expression during Aging and the Impact of Physical Activity on Its Expression and Chondrogenic Progenitors International Journal of Molecular Sciences 2023 24(17)
ZDB-PUB-231002-204 37777592 Carletti, A., Rosa, J.T., Pes, K., Borges, I., Santos, T., Barreira, L., Varela, J., Pereira, H., Cancela, M.L., Gavaia, P.J., Laizé, V. The osteogenic and mineralogenic potential of the microalgae Skeletonema costatum and Tetraselmis striata CTP4 in fish models Cellular and molecular life sciences : CMLS 2023 80 310310
ZDB-PUB-231130-7 38020918 Katkat, E., Demirci, Y., Heger, G., Karagulle, D., Papatheodorou, I., Brazma, A., Ozhan, G. Canonical Wnt and TGF-β/BMP signaling enhance melanocyte regeneration but suppress invasiveness, migration, and proliferation of melanoma cells Frontiers in cell and developmental biology 2023 11 12979101297910
ZDB-PUB-240103-28 Zebrafish Nomenclature Committee Nomenclature Data Curation (2024) Nomenclature Committee Submission 2024
ZDB-PUB-240111-21 38203559 Sobah, M.L., Liongue, C., Ward, A.C. Contribution of Signal Transducer and Activator of Transcription 3 (STAT3) to Bone Development and Repair International Journal of Molecular Sciences 2023 25(1)
ZDB-PUB-240314-5 38477756 Breuer, M., Rummler, M., Singh, J., Maher, S., Zaouter, C., Jamadagni, P., Pilon, N., Willie, B.M., Patten, S.A. CHD7 regulates craniofacial cartilage development via controlling HTR2B expression Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research 2024 39(4) 498-512
ZDB-PUB-240517-7 38754570 Niu, M., Whang, H., Wu, Z., ShouwenJiang, ., Chen, L. The deletion of Asb15b gene can lead to a significant decrease in zebrafish intermuscular bone Gene 2024 923 148561
ZDB-PUB-240922-4 39303930 Yu, T., Chen, M., Wen, J., Liu, J., Li, K., Jin, L., Yue, J., Yang, Z., Xi, J. The effects of all-trans retinoic acid on prednisolone-induced osteoporosis in zebrafish larvae Bone 2024 189 117261