Data Descriptions for The Zebrafish Database (ZDB)

This document is now obsolete. For a description of how ZFIN is currently implemented see the ZFIN Database Design document.

Table of Contents

• OVERVIEW:
  • Purpose and how to use this document
  • Proposed contents of Zebrafish Database
  • Graphical Overview of Class Structure
  • Abstract Class: GENERIC_OBJECT

  • SECTION I: The Zebrafish Community
    • Abstract Class: SOURCE
      • Class: PERSON
      • Class: LAB
      • Class: COMPANY
      • Class: PUBLICATION

  • SECTION II: Experimental Data
    • Abstract Class: DATA_ITEM
      • OVERVIEW: Representation of Map Markers
        • Class: MAP_MARKER
        • Class: CLONED_GENE
        • Class: EST
        • Class: ORTHOLOG
        • Class: SEQUENCE
        • Class: AMP_PRODUCT
        • Class: PRIMER_SEQ
      • OVERVIEW: Mutants and Chromosomes
        • Class: FISH
        • Class: CHROMOSOME
        • Class: ALTERATION
      • Abstract Class: LABEL
        • Class: ANTIBODY
        • Class: RNA PROBE
      • Class: IMAGES
      • Class: PHYSIOLOGICAL RECORDS

  • SECTION III: The Zebrafish Reference Resource
    • Class: Part
    • Class: Phys_Structure

  • SECTION IV: Behind the Scenes
    • Data Object: ID MANAGER
    • HIDDEN TABLE: PERSON-LAB
    • HIDDEN TABLE: ATTR_UPDATE
    • HIDDEN TABLE: DATA-PUB

  • APPENDIX

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  Data Descriptions for The Zebrafish Database (ZDB)