ZFIN ID: ZDB-LAB-061024-1
Traver Lab
PI/Director: Traver, David
Contact Person: Traver, David
Email: dtraver@ucsd.edu
URL: http://www.biology.ucsd.edu/labs/traver/index.html
Address: Section of Cell and Developmental Biology University of California, San Diego 9500 Gilman Drive Natural Sciences Building 6107 La Jolla, CA 92093-0380
Country: United States
Phone: (858) 822-4593
Fax: (858) 534-5457
Line Designation: sd


GENOMIC FEATURES ORIGINATING FROM THIS LAB
Show all 24 genomic features


STATEMENT OF RESEARCH INTERESTS


LAB MEMBERS
van der Vaart, Michiel


ZEBRAFISH PUBLICATIONS OF LAB MEMBERS
Sahai-Hernandez, P., Pouget, C., Eyal, S., Svoboda, O., Chacon, J., Grimm, L., Gjøen, T., Traver, D. (2023) Dermomyotome-derived endothelial cells migrate to the dorsal aorta to support hematopoietic stem cell emergence. eLIFE. 12:
Block, J., Rashkova, C., Castanon, I., Zoghi, S., Platon, J., Ardy, R.C., Fujiwara, M., Chaves, B., Schoppmeyer, R., van der Made, C.I., Jimenez Heredia, R., Harms, F.L., Alavi, S., Alsina, L., Sanchez Moreno, P., Ávila Polo, R., Cabrera-Pérez, R., Kostel Bal, S., Pfajfer, L., Ransmayr, B., Mautner, A.K., Kondo, R., Tinnacher, A., Caldera, M., Schuster, M., Domínguez Conde, C., Platzer, R., Salzer, E., Boyer, T., Brunner, H.G., Nooitgedagt-Frons, J.E., Iglesias, E., Deyà-Martinez, A., Camacho-Lovillo, M., Menche, J., Bock, C., Huppa, J.B., Pickl, W.F., Distel, M., Yoder, J.A., Traver, D., Engelhardt, K.R., Linden, T., Kager, L., Hannich, J.T., Hoischen, A., Hambleton, S., Illsinger, S., Da Costa, L., Kutsche, K., Chavoshzadeh, Z., van Buul, J.D., Antón, J., Calzada-Hernández, J., Neth, O., Viaud, J., Nishikimi, A., Dupré, L., Boztug, K. (2023) Systemic Inflammation and Normocytic Anemia in DOCK11 Deficiency. The New England Journal of Medicine. 389(6):527-539
Muñoz-Sánchez, S., Varela, M., van der Vaart, M., Meijer, A.H. (2023) Using Zebrafish to Dissect the Interaction of Mycobacteria with the Autophagic Machinery in Macrophages. Biology. 12(6):
Azad, P., Zhou, D., Tu, H.C., Villafuerte, F.C., Traver, D., Rana, T.M., Haddad, G.G. (2023) Long noncoding RNA HIKER regulates erythropoiesis in Monge's disease via CSNK2B. The Journal of Clinical Investigation. 133(11):
Kondo, M., Kimura, K., Kobayashi-Sun, J., Yamamori, S., Taniguchi, M., Traver, D., Kobayashi, I. (2023) The sinusoidal hematopoietic niche is formed by Jam1a via Notch signaling in the zebrafish kidney. iScience. 26:106508106508
Banducci-Karp, A., Xie, J., Engels, S.A.G., Sarantaris, C., van Hage, P., Varela, M., Meijer, A.H., van der Vaart, M. (2023) DRAM1 Promotes Lysosomal Delivery of Mycobacterium marinum in Macrophages. Cells. 12(6):
Boland, R., Heemskerk, M.T., Forn-Cuní, G., Korbee, C.J., Walburg, K.V., Esselink, J.J., Carvalho Dos Santos, C., de Waal, A.M., van der Hoeven, D.C.M., van der Sar, E., de Ries, A.S., Xie, J., Spaink, H.P., van der Vaart, M., Haks, M.C., Meijer, A.H., Ottenhoff, T.H.M. (2022) Repurposing Tamoxifen as Potential Host-Directed Therapeutic for Tuberculosis. mBio. 14(1):e0302422
Kraus, J.M., Giovannone, D., Rydzik, R., Balsbaugh, J.L., Moss, I.L., Schwedler, J.L., Bertrand, J.Y., Traver, D., Hankenson, K.D., Crump, J.G., Youngstrom, D.W. (2022) Notch signaling enhances bone regeneration in the zebrafish mandible. Development (Cambridge, England). 149(5)
Campbell, C.A., Fursova, O., Cheng, X., Snella, E., McCune, A., Li, L., Solchenberger, B., Schmid, B., Sahoo, D., Morton, M., Traver, D., Espín-Palazón, R. (2021) A zebrafish model of granulin deficiency reveals essential roles in myeloid cell differentiation. Blood advances. 5:796-811
Oltova, J., Svoboda, O., Machonova, O., Svatonova, P., Traver, D., Kolar, M., Bartunek, P. (2020) Zebrafish Kit ligands cooperate with erythropoietin to promote erythroid cell expansion. Blood advances. 4:5915-5924
Espanola, S.G., Song, H., Ryu, E., Saxena, A., Kim, E.S., Manegold, J.E., Nasamran, C.A., Sahoo, D., Oh, C.K., Bickers, C., Shin, U., Grainger, S., Park, Y.H., Pandolfo, L., Kang, M.S., Kang, S., Myung, K., Cooper, K.L., Yelon, D., Traver, D., Lee, Y. (2020) Haematopoietic stem cell-dependent Notch transcription is mediated by p53 through the Histone chaperone Supt16h. Nature cell biology. 22(12):1411-1422
Muñoz-Sánchez, S., van der Vaart, M., Meijer, A.H. (2020) Autophagy and Lc3-Associated Phagocytosis in Zebrafish Models of Bacterial Infections. Cells. 9(11):
Zhang, R., Varela, M., Forn-Cuní, G., Torraca, V., van der Vaart, M., Meijer, A.H. (2020) Deficiency in the autophagy modulator Dram1 exacerbates pyroptotic cell death of Mycobacteria-infected macrophages. Cell Death & Disease. 11:277
Puyskens, A., Stinn, A., van der Vaart, M., Kreuchwig, A., Protze, J., Pei, G., Klemm, M., Guhlich-Bornhof, U., Hurwitz, R., Krishnamoorthy, G., Schaaf, M., Krause, G., Meijer, A.H., Kaufmann, S.H.E., Moura-Alves, P. (2019) Aryl Hydrocarbon Receptor Modulation by Tuberculosis Drugs Impairs Host Defense and Treatment Outcomes. Cell Host & Microbe. 27(2):238-248.e7
Kobayashi, I., Kondo, M., Yamamori, S., Kobayashi-Sun, J., Taniguchi, M., Kanemaru, K., Katakura, F., Traver, D. (2019) Enrichment of hematopoietic stem/progenitor cells in the zebrafish kidney. Scientific Reports. 9:14205
Hong, S., Sahai-Hernandez, P., Chapla, D.G., Moremen, K.W., Traver, D., Wu, P. (2019) Direct Visualization of Live Zebrafish Glycan via Single-step Metabolic Labeling with Fluorophore-tagged Nucleotide Sugars. Angewandte Chemie (International ed. in English). 58(40):14327-14333
Grainger, S., Nguyen, N., Richter, J., Setayesh, J., Lonquich, B., Oon, C.H., Wozniak, J.M., Barahona, R., Kamei, C.N., Houston, J., Carrillo-Terrazas, M., Drummond, I.A., Gonzalez, D., Willert, K., Traver, D. (2019) EGFR is required for Wnt9a-Fzd9b signalling specificity in haematopoietic stem cells. Nature cell biology. 21(6):721-730
Gu, Q., Yang, X., Lv, J., Zhang, J., Xia, B., Kim, J.D., Wang, R., Xiong, F., Meng, S., Clements, T.P., Tandon, B., Wagner, D.S., Diaz, M.F., Wenzel, P.L., Miller, Y.I., Traver, D., Cooke, J.P., Li, W., Zon, L.I., Chen, K., Bai, Y., Fang, L. (2019) AIBP-mediated cholesterol efflux instructs hematopoietic stem and progenitor cell fate. Science (New York, N.Y.). 363:1085-1088
Zhang, R., Varela, M., Vallentgoed, W., Forn-Cuni, G., van der Vaart, M., Meijer, A.H. (2019) The selective autophagy receptors Optineurin and p62 are both required for zebrafish host resistance to mycobacterial infection. PLoS pathogens. 15:e1007329
Masud, S., Prajsnar, T.K., Torraca, V., Lamers, G.E.M., Benning, M., Van Der Vaart, M., Meijer, A.H. (2019) Macrophages target Salmonella by Lc3-associated phagocytosis in a systemic infection model. Autophagy. 15(5):796-812
Weijts, B., Gutierrez, E., Saikin, S.K., Ablooglu, A.J., Traver, D., Groisman, A., Tkachenko, E. (2018) Blood flow-induced Notch activation and endothelial migration enable vascular remodeling in zebrafish embryos. Nature communications. 9:5314
Bickers, C., Española, S.D., Grainger, S., Pouget, C., Traver, D. (2018) Zebrafish snai2 mutants fail to phenocopy morphant phenotypes. PLoS One. 13:e0202747
Ferrero, G., Mahony, C.B., Dupuis, E., Yvernogeau, L., Di Ruggiero, E., Miserocchi, M., Caron, M., Robin, C., Traver, D., Bertrand, J.Y., Wittamer, V. (2018) Embryonic Microglia Derive from Primitive Macrophages and Are Replaced by cmyb-Dependent Definitive Microglia in Zebrafish. Cell Reports. 24:130-141
Troll, J.V., Hamilton, M.K., Abel, M.L., Ganz, J., Bates, J.M., Stephens, W.Z., Melancon, E., van der Vaart, M., Meijer, A.H., Distel, M., Eisen, J.S., Guillemin, K. (2018) Microbiota promote secretory cell determination in the intestinal epithelium by modulating host Notch signaling. Development (Cambridge, England). 145(4)
Richter, J., Stanley, E.G., Ng, E.S., Elefanty, A.G., Traver, D., Willert, K. (2018) WNT9A Is a Conserved Regulator of Hematopoietic Stem and Progenitor Cell Development. Genes. 9(2)
van der Vaart, M., Svoboda, O., Weijts, B.G., Espín-Palazón, R., Sapp, V., Pietri, T., Bagnat, M., Muotri, A.R., Traver, D. (2017) Mecp2 regulates tnfa during zebrafish embryonic development and acute inflammation.. Disease models & mechanisms. 10(12):1439-1451
Weijts, B., Tkachenko, E., Traver, D., Groisman, A. (2017) A Four-Well Dish for High-Resolution Longitudinal Imaging of the Tail and Posterior Trunk of Larval Zebrafish. Zebrafish. 14(5):489-491
Grainger, S., Lonquich, B., Oon, C.H., Nguyen, N., Willert, K., Traver, D. (2017) CRISPR Guide RNA Validation In Vitro. Zebrafish. 14(4):383-386
Richter, J., Traver, D., Willert, K. (2017) The role of Wnt signaling in hematopoietic stem cell development. Critical reviews in biochemistry and molecular biology. 52:414-424
Mesureur, J., Feliciano, J.R., Wagner, N., Gomes, M.C., Zhang, L., Blanco-Gonzalez, M., van der Vaart, M., O'Callaghan, D., Meijer, A.H., Vergunst, A.C. (2017) Macrophages, but not neutrophils, are critical for proliferation of Burkholderia cenocepacia and ensuing host-damaging inflammation. PLoS pathogens. 13:e1006437
Keightley, M.C., Carradice, D.P., Layton, J.E., Pase, L., Bertrand, J.Y., Wittig, J.G., Dakic, A., Badrock, A.P., Cole, N.J., Traver, D., Nutt, S.L., McCoey, J., Buckle, A.M., Heath, J.K., Lieschke, G.J. (2017) The Pu.1 target gene Zbtb11 regulates neutrophil development through its integrase-like HHCC zinc finger. Nature communications. 8:14911
Wolf, A., Aggio, J., Campbell, C., Wright, F., Marquez, G., Traver, D., Stachura, D.L. (2017) Zebrafish Caudal Haematopoietic Embryonic Stromal Tissue (CHEST) Cells Support Haematopoiesis. Scientific Reports. 7:44644
Lardelli, R.M., Schaffer, A.E., Eggens, V.R., Zaki, M.S., Grainger, S., Sathe, S., Van Nostrand, E.L., Schlachetzki, Z., Rosti, B., Akizu, N., Scott, E., Silhavy, J.L., Heckman, L.D., Rosti, R.O., Dikoglu, E., Gregor, A., Guemez-Gamboa, A., Musaev, D., Mande, R., Widjaja, A., Shaw, T.L., Markmiller, S., Marin-Valencia, I., Davies, J.H., de Meirleir, L., Kayserili, H., Altunoglu, U., Freckmann, M.L., Warwick, L., Chitayat, D., Blaser, S., Çağlayan, A.O., Bilguvar, K., Per, H., Fagerberg, C., Christesen, H.T., Kibaek, M., Aldinger, K.A., Manchester, D., Matsumoto, N., Muramatsu, K., Saitsu, H., Shiina, M., Ogata, K., Foulds, N., Dobyns, W.B., Chi, N.C., Traver, D., Spaccini, L., Bova, S.M., Gabriel, S.B., Gunel, M., Valente, E.M., Nassogne, M.C., Bennett, E.J., Yeo, G.W., Baas, F., Lykke-Andersen, J., Gleeson, J.G. (2017) Biallelic mutations in the 3' exonuclease TOE1 cause pontocerebellar hypoplasia and uncover a role in snRNA processing. Nature Genetics. 49(3):457-464
Boyle, G., Richter, K., Priest, H.D., Traver, D., Mockler, T.C., Chang, J.T., Kay, S.A., Breton, G. (2017) Comparative Analysis of Vertebrate Diurnal/Circadian Transcriptomes. PLoS One. 12:e0169923
Henninger, J., Santoso, B., Hans, S., Durand, E., Moore, J., Mosimann, C., Brand, M., Traver, D., Zon, L. (2017) Clonal fate mapping quantifies the number of haematopoietic stem cells that arise during development. Nature cell biology. 19(1):17-27
Li, R.A., Traver, D., Matthes, T., Bertrand, J.Y. (2016) Ndrg1b and fam49ab modulate the PTEN pathway to control T cell lymphopoiesis in the zebrafish. Blood. 128(26):3052-3060
Grainger, S., Richter, J., Palazón, R.E., Pouget, C., Lonquich, B., Wirth, S., Grassme, K.S., Herzog, W., Swift, M.R., Weinstein, B.M., Traver, D., Willert, K. (2016) Wnt9a Is Required for the Aortic Amplification of Nascent Hematopoietic Stem Cells. Cell Reports. 17:1595-1606
Kim, J.H., Shinde, D.N., Reijnders, M.R., Hauser, N.S., Belmonte, R.L., Wilson, G.R., Bosch, D.G., Bubulya, P.A., Shashi, V., Petrovski, S., Stone, J.K., Park, E.Y., Veltman, J.A., Sinnema, M., Stumpel, C.T., Draaisma, J.M., Nicolai, J., Yntema, H.G., Lindstrom, K., de Vries, B.B., Jewett, T., Santoro, S.L., Vogt, J., Bachman, K.K., Seeley, A.H., Krokosky, A., Turner, C., Rohena, L., Hempel, M., Kortüm, F., Lessel, D., Neu, A., Strom, T.M., Wieczorek, D., Bramswig, N., Laccone, F.A., Behunova, J., Rehder, H., Gordon, C.T., Rio, M., Romana, S., Tang, S., El-Khechen, D., Cho, M.T., McWalter, K., Douglas, G., Baskin, B., Begtrup, A., Funari, T., Schoch, K., Stegmann, A.P., Stevens, S.J., Zhang, D.E., Traver, D., Yao, X., MacArthur, D.G., Brunner, H.G., Mancini, G.M., Myers, R.M., Owen, L.B., Lim, S.T., Stachura, D.L., Vissers, L.E., Ahn, E.E. (2016) De Novo Mutations in SON Disrupt RNA Splicing of Genes Essential for Brain Development and Metabolism, Causing an Intellectual-Disability Syndrome. American journal of human genetics. 99(3):711-9
Svoboda, O., Stachura, D.L., Machonova, O., Zon, L.I., Traver, D., Bartunek, P. (2016) Ex vivo tools for the clonal analysis of zebrafish hematopoiesis. Nature Protocols. 11:1007-1020
Sertori, R., Liongue, C., Basheer, F., Lewis, K.L., Rasighaemi, P., de Coninck, D., Traver, D., Ward, A.C. (2016) Conserved IL-2Rγc Signaling Mediates Lymphopoiesis in Zebrafish. Journal of immunology (Baltimore, Md. : 1950). 196(1):135-43
Stachura, D.L., Traver, D. (2016) Cellular dissection of zebrafish hematopoiesis. Methods in cell biology. 133:11-53
Campbell, C., Su, T., Lau, R.P., Shah, A., Laurie, P.C., Avalos, B., Aggio, J., Harris, E., Traver, D., Stachura, D.L. (2015) Zebrafish Embryonic Stromal Trunk (ZEST) cells support hematopoietic stem and progenitor cell (HSPC) proliferation, survival, and differentiation. Experimental hematology. 43(12):1047-61
Kim, B.J., Hancock, B.M., Bermudez, A., Cid, N.D., Reyes, E., van Sorge, N.M., Lauth, X., Smurthwaite, C.A., Hilton, B.J., Stotland, A., Banerjee, A., Buchanan, J., Wolkowicz, R., Traver, D., Doran, K.S. (2015) Bacterial induction of Snail1 contributes to blood-brain barrier disruption. The Journal of Clinical Investigation. 125(6):2473-83
Butko, E., Distel, M., Pouget, C., Weijts, B., Kobayashi, I., Ng, K., Mosimann, C., Poulain, F.E., McPherson, A., Ni, C.W., Stachura, D.L., Del Cid, N., Espín-Palazón, R., Lawson, N.D., Dorsky, R., Clements, W.K., Traver, D. (2015) Gata2b is a restricted early regulator of hemogenic endothelium in the zebrafish embryo. Development (Cambridge, England). 142:1050-61
Sahai-Hernandez, P., Traver, D. (2015) Intimacy of the niche: perivascular remodeling cuddles incoming HSCs. Cell Stem Cell. 16:109-10
Kim, B.J., Hancock, B.M., Del Cid, N., Bermudez, A., Traver, D., Doran, K.S. (2015) Streptococcus agalactiae infection in zebrafish larvae. Microbial pathogenesis. 79C:57-60
Marín-Juez, R., Rovira, M., Crespo, D., van der Vaart, M., Spaink, H.P., Planas, J.V. (2015) GLUT2-mediated glucose uptake and availability are required for embryonic brain development in zebrafish. Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. 35(1):74-85
Lee, Y., Manegold, J.E., Kim, A.D., Pouget, C., Stachura, D.L., Clements, W.K., Traver, D. (2014) FGF signalling specifies haematopoietic stem cells through its regulation of somitic Notch signalling. Nature communications. 5:5583
Pouget, C., Peterkin, T., Simões, F.C., Lee, Y., Traver, D., Patient, R. (2014) FGF signalling restricts haematopoietic stem cell specification via modulation of the BMP pathway. Nature communications. 5:5588
Espín-Palazón, R., Stachura, D.L., Campbell, C.A., García-Moreno, D., Del Cid, N., Kim, A.D., Candel, S., Meseguer, J., Mulero, V., Traver, D. (2014) Proinflammatory signaling regulates hematopoietic stem cell emergence. Cell. 159:1070-85
Kim, A.D., Melick, C.H., Clements, W.K., Stachura, D.L., Distel, M., Panáková, D., MacRae, C., Mork, L.A., Crump, J.G., Traver, D. (2014) Discrete Notch signaling requirements in the specification of hematopoietic stem cells. The EMBO journal. 33(20):2363-73
Varela, M., Romero, A., Dios, S., van der Vaart, M., Figueras, A., Meijer, A.H., Novoa, B. (2014) Cellular Visualization of Macrophage Pyroptosis and Interleukin-1β Release in a Viral Hemorrhagic Infection in Zebrafish Larvae. Journal of virology. 88(20):12026-40
Charbord, P., Pouget, C., Binder, H., Dumont, F., Stik, G., Levy, P., Allain, F., Marchal, C., Richter, J., Uzan, B., Pflumio, F., Letourneur, F., Wirth, H., Dzierzak, E., Traver, D., Jaffredo, T., Durand, C. (2014) A Systems Biology Approach for Defining the Molecular Framework of the Hematopoietic Stem Cell Niche. Cell Stem Cell. 15(3):376-91
Lewis, K.L., Del Cid, N., Traver, D. (2014) Perspectives on antigen presenting cells in zebrafish. Developmental and comparative immunology. 46(1):63-73
Kobayashi, I., Kobayashi-Sun, J., Kim, A.D., Pouget, C., Fujita, N., Suda, T., Traver, D. (2014) Jam1a-Jam2a interactions regulate haematopoietic stem cell fate through Notch signalling. Nature. 512(7514):319-23
Fenaroli, F., Westmoreland, D., Benjaminsen, J., Kolstad, T., Skjeldal, F.M., Meijer, A., van der Vaart, M., Ulanova, L., Roos, N., Nyström, B., Hildahl, J., Griffiths, G. (2014) Nanoparticles as Drug Delivery System against Tuberculosis in Zebrafish Embryos: Direct Visualization and Treatment. ACS nano. 8(7):7014-26
Svoboda, O., Stachura, D.L., Machonova, O., Pajer, P., Brynda, J., Zon, L.I., Traver, D., Bartunek, P. (2014) Dissection of vertebrate hematopoiesis using zebrafish thrombopoietin. Blood. 124(2):220-8
Elks, P.M., van der Vaart, M., van Hensbergen, V., Schutz, E., Redd, M.J., Murayama, E., Spaink, H.P., Meijer, A.H. (2014) Mycobacteria Counteract a TLR-Mediated Nitrosative Defense Mechanism in a Zebrafish Infection Model. PLoS One. 9:e100928
van der Vaart, M., Korbee, C.J., Lamers, G.E., Tengeler, A.C., Hosseini, R., Haks, M.C., Ottenhoff, T.H., Spaink, H.P., Meijer, A.H. (2014) The DNA Damage-Regulated Autophagy Modulator DRAM1 Links Mycobacterial Recognition via TLR-MYD88 to Autophagic Defense. Cell Host & Microbe. 15(6):753-767
Meijer, A.H., van der Vaart, M. (2014) DRAM1 promotes the targeting of mycobacteria to selective autophagy. Autophagy. 10(12):2389-91
Meijer, A.H., van der Vaart, M., and Spaink, H.P. (2014) Real-time imaging and genetic dissection of host-microbe interactions in zebrafish. Cellular Microbiology. 16(1):39-49
Stachura, D.L., Svoboda, O., Campbell, C.A., Espín-Palazón, R., Lau, R.P., Zon, L.I., Bartunek, P., and Traver, D. (2013) The zebrafish granulocyte colony-stimulating factors (Gcsfs): 2 paralogous cytokines and their roles in hematopoietic development and maintenance. Blood. 122(24):3918-28
Page, D.M., Wittamer, V., Bertrand, J.Y., Lewis, K.L., Pratt, D.N., Delgado, N., Schale, S.E., McGue, C., Jacobsen, B.H., Doty, A., Pao, Y., Yang, H., Chi, N.C., Magor, B.G., and Traver, D. (2013) An evolutionarily conserved program of B cell development and activation in zebrafish. Blood. 122(8):e1-e11
van der Vaart, M., van Soest, J.J., Spaink, H.P., and Meijer, A.H. (2013) Functional analysis of a zebrafish myd88 mutant identifies key transcriptional components of the innate immune system. Disease models & mechanisms. 6(3):841-54
Elks, P.M., Brizee, S., van der Vaart, M., Walmsley, S.R., van Eeden, F.J., Renshaw, S.A., and Meijer, A.H. (2013) Hypoxia inducible factor signaling modulates susceptibility to mycobacterial infection via a nitric oxide dependent mechanism. PLoS pathogens. 9(12):e1003789
Clements, W.K., and Traver, D. (2012) Fish pharming: zebrafish antileukemia screening. Blood. 119(24):5614-5615
Shah, R.N., Rodriguez-Nunez, I., Eason, D.D., Haire, R.N., Bertrand, J.Y., Wittamer, V., Traver, D., Nordone, S.K., Litman, G.W., and Yoder, J.A. (2012) Development and characterization of anti-nitr9 antibodies. Advances in hematology. 2012:596925
van der Vaart, M., Spaink, H.P., and Meijer, A.H. (2012) Pathogen Recognition and Activation of the Innate Immune Response in Zebrafish. Advances in hematology. 2012:159807
Stachura, D.L., Svoboda, O., Lau, R.P., Balla, K.M., Zon, L.I., Bartunek, P., and Traver, D. (2011) Clonal analysis of hematopoietic progenitor cells in the zebrafish. Blood. 118(5):1274-82
Wittamer, V., Bertrand, J.Y., Gutschow, P.W., and Traver, D. (2011) Characterization of the mononuclear phagocyte system in zebrafish. Blood. 117(26):7126-7135
Clements, W.K., Kim, A.D., Ong, K.G., Moore, J.C., Lawson, N.D., and Traver, D. (2011) A somitic Wnt16/Notch pathway specifies haematopoietic stem cells. Nature. 474(7350):220-224
Cui, C., Benard, E.L., Kanwal, Z., Stockhammer, O.W., van der Vaart, M., Zakrzewska, A., Spaink, H.P., and Meijer, A.H. (2011) Infectious disease modeling and innate immune function in zebrafish embryos. Methods in cell biology. 105:273-308
Hirota, T., Lee, J.W., Lewis, W.G., Zhang, E.E., Breton, G., Liu, X., Garcia, M., Peters, E.C., Etchegaray, J.P., Traver, D., Schultz, P.G., and Kay, S.A. (2010) High-Throughput Chemical Screen Identifies a Novel Potent Modulator of Cellular Circadian Rhythms and Reveals CKIα as a Clock Regulatory Kinase. PLoS Biology. 8(12):e1000559
Balla, K.M., Lugo-Villarino, G., Spitsbergen, J.M., Stachura, D.L., Hu, Y., Banuelos, K., Romo-Fewell, O., Aroian, R.V., and Traver, D. (2010) Eosinophils in the zebrafish: prospective isolation, characterization, and eosinophilia induction by helminth determinants. Blood. 116(19):3944-3954
Feng, H., Stachura, D.L., White, R.M., Gutierrez, A., Zhang, L., Sanda, T., Jette, C.A., Testa, J.R., Neuberg, D.S., Langenau, D.M., Kutok, J.L., Zon, L.I., Traver, D., Fleming, M.D., Kanki, J.P., and Look, A.T. (2010) T-lymphoblastic lymphoma cells express high levels of BCL2, S1P1, and ICAM1, leading to a blockade of tumor cell intravasation. Cancer Cell. 18(4):353-366
Lugo-Villarino, G., Balla, K.M., Stachura, D.L., Bañuelos, K., Werneck, M.B., and Traver, D. (2010) Identification of dendritic antigen-presenting cells in the zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 107(36):15850-15855
Bertrand, J.Y., Cisson, J.L., Stachura, D.L., and Traver, D. (2010) Notch signaling distinguishes two waves of definitive hematopoiesis in the zebrafish embryo. Blood. 115(14):2777-2783
Bertrand, J.Y., Chi, N.C., Santoso, B., Teng, S., Stainier, D.Y., and Traver, D. (2010) Haematopoietic stem cells derive directly from aortic endothelium during development. Nature. 464(7285):108-111
Yoder, J.A., Turner, P.M., Wright, P.D., Wittamer, V., Bertrand, J.Y., Traver, D., and Litman, G.W. (2010) Developmental and tissue-specific expression of NITRs. Immunogenetics. 62(2):117-122
Amigo, J.D., Ackermann, G.E., Cope, J.J., Yu, M., Cooney, J.D., Ma, D., Langer, N.B., Shafizadeh, E., Shaw, G.C., Horsley, W., Trede, N.S., Davidson, A.J., Barut, B.A., Zhou, Y., Wojiski, S.A., Traver, D., Moran, T.B., Kourkoulis, G., Hsu, K., Kanki, J.P., Shah, D.I., Lin, H.F., Handin, R.I., Cantor, A.B., and Paw, B.H. (2009) The role and regulation of friend of GATA-1 (FOG-1) during blood development in the zebrafish. Blood. 114(21):4654-4663
Stachura, D.L., Reyes, J.R., Bartunek, P., Paw, B.H., Zon, L.I., and Traver, D. (2009) Zebrafish kidney stromal cell lines support multilineage hematopoiesis. Blood. 114(2):279-289
Bertrand, J.Y., and Traver, D. (2009) Hematopoietic cell development in the zebrafish embryo. Current opinion in hematology. 16(4):243-248
Clements, W.K., Ong, K.G., and Traver, D. (2009) Zebrafish wnt3 is expressed in developing neural tissue. Developmental Dynamics : an official publication of the American Association of Anatomists. 238(7):1788-1795
van der Vaart, M., and Schaaf, M.J. (2009) Naturally occurring C-terminal splice variants of nuclear receptors. Nuclear receptor signaling. 7:e007
Cantagrel, V., Silhavy, J.L., Bielas, S.L., Swistun, D., Marsh, S.E., Bertrand, J.Y., Audollent, S., Attié-Bitach, T., Holden, K.R., Dobyns, W.B., Traver, D., Al-Gazali, L., Ali, B.R., Lindner, T.H., Caspary, T., Otto, E.A., Hildebrandt, F., Glass, I.A., Logan, C.V., Johnson, C.A., Bennett, C., Brancati, F.; International Joubert Syndrome Related Disorders Study Group, Valente, E.M., Woods, C.G., Gleeson, J.G. (2008) Mutations in the cilia gene ARL13B lead to the classical form of Joubert syndrome. American journal of human genetics. 83(2):170-179
Bertrand, J.Y., Kim, A.D., Teng, S., and Traver, D. (2008) CD41+ cmyb+ precursors colonize the zebrafish pronephros by a novel migration route to initiate adult hematopoiesis. Development (Cambridge, England). 135(10):1853-1862
Bertrand, J.Y., Kim, A.D., Violette, E.P., Stachura, D.L., Cisson, J.L., and Traver, D. (2007) Definitive hematopoiesis initiates through a committed erythromyeloid progenitor in the zebrafish embryo. Development (Cambridge, England). 134(23):4147-4156
Yoder, J.A., Orcutt, T.M., Traver, D., and Litman, G.W. (2007) Structural characteristics of zebrafish orthologs of adaptor molecules that associate with transmembrane immune receptors. Gene. 401(1-2):154-164
Wei, S., Zhou, J.M., Chen, X., Shah, R.N., Liu, J., Orcutt, T.M., Traver, D., Djeu, J.Y., Litman, G.W., and Yoder, J.A. (2007) The zebrafish activating immune receptor Nitr9 signals via Dap12. Immunogenetics. 59(10):813-821
Ablooglu, A.J., Kang, J., Handin, R.I., Traver, D., and Shattil, S.J. (2007) The zebrafish vitronectin receptor: Characterization of integrin alphaV and beta3 expression patterns in early vertebrate development. Developmental Dynamics : an official publication of the American Association of Anatomists. 236(8):2268-2276
Zon, L.I., Traver, D., Davidson,A.J., Van Slyke, C. (2006) ZFIN Anatomy Working Group: Blood. Manually curated data.
Shaw, G.C., Cope, J.J., Li, L., Corson, K., Hersey, C., Ackermann, G.E., Gwynn, B., Lambert, A.J., Wingert, R.A., Traver, D., Trede, N.S., Barut, B.A., Zhou, Y., Minet, E., Donovan, A., Brownlie, A., Balzan, R., Weiss, M.J., Peters, L.L., Kaplan, J., Zon, L.I., and Paw, B.H. (2006) Mitoferrin is essential for erythroid iron assimilation. Nature. 440(7080):96-100
Panagos, P.G., Dobrinski, K.P., Chen, X., Grant, A.W., Traver, D., Djeu, J.Y., Wei, S., and Yoder, J.A. (2006) Immune-related, lectin-like receptors are differentially expressed in the myeloid and lymphoid lineages of zebrafish. Immunogenetics. 58(1):31-40
Lin, H.F., Traver, D., Zhu, H., Dooley, K., Paw, B.H., Zon, L.I., and Handin, R.I. (2005) Analysis of thrombocyte development in CD41-GFP transgenic zebrafish. Blood. 106(12):3803-3810
Burns, C.E., Traver, D., Mayhall, E., Shepard, J.L., and Zon, L.I. (2005) Hematopoietic stem cell fate is established by the Notch-Runx pathway. Genes & Development. 19(19):2331-2342
Fraenkel, P.G., Traver, D., Donovan, A., Zahrieh, D., and Zon, L.I. (2005) Ferroportin1 is required for normal iron cycling in zebrafish. J. Clin. Invest.. 115(6):1532-1541
Zhu, H., Traver, D., Davidson, A.J., Dibiase, A., Thisse, C., Thisse, B., Nimer, S., and Zon, L.I. (2005) Regulation of the lmo2 promoter during hematopoietic and vascular development in zebrafish. Developmental Biology. 281(2):256-269
Patton, E.E., Widlund, H.R., Kutok, J.L., Kopani, K.R., Amatruda, J.F., Murphey, R.D., Berghmans, S., Mayhall, E.A., Traver, D., Fletcher, C.D., Aster, J.C., Granter, S.R., Look, A.T., Lee, C., Fisher, D.E., and Zon, L.I. (2005) BRAF Mutations Are Sufficient to Promote Nevi Formation and Cooperate with p53 in the Genesis of Melanoma. Current biology : CB. 15(3):249-254
Hsu, K., Traver, D., Kutok, J.L., Hagen, A., Liu, T.X., Paw, B.H., Rhodes, J., Berman, J., Zon, L.I., Kanki, J.P., and Look, A.T. (2004) The pu.1 promoter drives myeloid gene expression in zebrafish. Blood. 104(5):1291-1297
Traver, D., Winzeler, A., Stern, H.M., Mayhall, E.A., Langenau, D.M., Kutok, J.L., Look, A.T., and Zon, L.I. (2004) Effects of lethal irradiation in zebrafish and rescue by hematopoietic cell transplantation. Blood. 104(5):1298-1305
Ransom, D.G., Bahary, N., Niss, K., Traver, D., Burns, C., Trede, N.S., Paffett-Lugassy, N., Saganic, W.J., Lim, C.A., Hersey, C., Zhou, Y., Barut, B.A., Lin, S., Kingsley, P.D., Palis, J., Orkin, S.H., and Zon, L.I. (2004) The Zebrafish moonshine Gene Encodes Transcriptional Intermediary Factor 1gamma, an Essential Regulator of Hematopoiesis. PLoS Biology. 2(8):E237
Langenau, D.M., Ferrando, A.A., Traver, D., Kutok, J.L., Hezel, J.P., Kanki, J.P., Zon, L.I., Look, A.T., and Trede, N.S. (2004) In vivo tracking of T cell development, ablation, and engraftment in transgenic zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 101(19):7369-7374
Trede, N.S., Langenau, D.M., Traver, D., Look, A.T., and Zon, L.I. (2004) The use of zebrafish to understand immunity. Immunity. 20(4):367-379
Traver, D. (2004) Cellular dissection of zebrafish hematopoiesis. The Zebrafish: Cellular and Developmental Biology,2nd Ed. Methods Cell Biol.. 76:127-149
Traver, D., Paw, B.H., Poss, K.D., Penberthy, W.T., Lin, S., and Zon, L.I. (2003) Transplantation and in vivo imaging of multilineage engraftment in zebrafish bloodless mutants. Nature immunology. 4(12):1238-1246
Langenau, D.M., Traver, D., Ferrando, A.A., Kutok, J.L., Aster, J.C., Kanki, J.P., Lin, S., Prochownik, E., Trede, N.S., Zon, L.I., and Look, A.T. (2003) Myc-induced T cell leukemia in transgenic zebrafish. Science (New York, N.Y.). 299(5608):887-890
Traver, D., Herbomel, P., Patton, E.E., Murphey, R.D., Yoder, J.A., Litman, G.W., Catic, A., Amemiya, C.T., Zon, L.I., and Trede, N.S. (2003) The zebrafish as a model organism to study development of the immune system. Advances in immunology. 81:253-330
Traver, D. and Zon, L.I. (2002) Walking the walk: migration and other common themes in blood and vascular development. Cell. 108(6):731-734