Research
General Information
ZIRC
ZFIN: Gene: pard6gb
ZFIN ID: ZDB-GENE-010319-35

Gene Name:par-6 partitioning defective 6 homolog gamma B (C. elegans)
Gene Symbol: pard6gb
Previous Names: sb:cb182, cb182(1) , id:ibd2873, wu:fc33c12
Nomenclature History


GENE EXPRESSION:(current status)
All expression data: 17 figure(s) from 4 publications
Directly submitted expression data: 6 figure(s) (8 images) from Thisse et al., 2001 [cb182]
  4 figure(s) (5 images) from Kudoh et al., 2001 [ibd2873]
  6 figure(s) (20 images) from Thisse et al., 2005 [eu699]
Wild Type Stages, Structures: Cleavage:4-cell (1.00h-1.25h) to Hatching:Long-pec (48.00h-60.00h)
  axis, central nervous system ... (all 20)
Curated microarray expression: GEO  (1)

MUTANTS AND TARGETED KNOCKDOWNS:
Mutant line(s):   8 genotypes
Allele(s):   fh266, s441, unrec_pard6gb
Phenotype: (current status)
  Data: 5 figures from Munson et al., 2008
  Observed in: central canal, embryonic heart tube development, gut, lateral plate mesoderm, myocardium ... (all 11)
Knockdown reagent: MO1-pard6gb (1)

GENE PRODUCTS:

Gene Ontology
Ontology GO Term
Biological Process apical protein localization (more)
Cellular Component apical plasma membrane (more)
Molecular Function protein binding
All GO Terms (9)

Protein Families, Domains and Sites:
  • InterPro:IPR000270 (1)
  • InterPro:IPR001478 (1)
  • PROSITE:PS50106 (1)
  • Pfam:PF00564 (1)
  • Pfam:PF00595 (1)
  • Loading Transcript Data...

    Gene Product Description


    SEGMENT (CLONE AND PROBE) RELATIONSHIPS:
    pard6gb Contained in [BAC] DKEY-202E17 (1)    (order this) , DKEY-286J2 (1)    (order this)
    pard6gb Encodes [EST] cb182 (1)    (order this) , eu699 (1) , fc33c12 (1) , ibd2873    (order this)

    SEQUENCE INFORMATION:
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212563 (1) 3096 bp
    Genomic GenBank:BX842688 (1) 254720 bp
    Polypeptide UniProtKB:Q6TNS1 (1) 434 aa
    Sequence Clusters UniGene:27686 (1)
    All Sequence Information (14)

    OTHER  pard6gb  GENE / MARKER PAGES:

  • Entrez Gene:80959 (1)
  • VEGA:OTTDARG00000014750 (1)
  • Ensembl(Zv8):ENSDARG00000036090 (1)

  • MAPPING INFORMATION:
      LG:  19  Details   View Map: Merged  Individual Panels

    ORTHOLOGY:
      Evidence
    Species Symbol Chromosome (Position) Accession # AA
    Zebrafish pard6gb  19
    Human PARD6G  18 (q23)
  • Entrez Gene:84552
  • Orthology Details

    CITATIONS   (20)